source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	12151753	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	72	A1,A14,A19,A21,A24,A3,A5,A6,A8,B10,B102,B109,B113,B117,B12,B13,B131,B134,B136,B138,B16,B17,B18,B2,B20,B21,B25,B30,B33,B35,B36,B46,B48,B52,B54,B55,B57,B61,B62,B63,B64,B66,B68,B7,B83,B88,B89,B91,B99,C17,C25,C26,C37,C38,C5,C50,C54,C56,C6,C61,C62,C68,C70,C72,C73,C79,C81,C82,D1,D6,D8,D9
lof_cds	Chr3	12151755	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	76	A1,A14,A19,A21,A24,A3,A5,A6,A8,B10,B102,B109,B113,B117,B12,B13,B131,B134,B136,B138,B15,B16,B17,B18,B2,B20,B21,B25,B30,B33,B35,B36,B46,B48,B50,B52,B54,B55,B57,B61,B62,B63,B64,B66,B68,B7,B83,B88,B89,B91,B99,C16,C17,C25,C26,C27,C37,C38,C5,C50,C54,C56,C6,C61,C62,C68,C70,C72,C73,C79,C81,C82,D1,D6,D8,D9
typical_cds_rare	Chr3	12151804	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	C1
lof_cds	Chr3	12151869	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	A21
typical_cds_rare	Chr3	12151869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	A21
lof_cds	Chr3	12151922	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	A9
typical_cds_rare	Chr3	12151922	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	A9
typical_cds_rare	Chr3	12151950	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	3	A6,C62,D6
typical_cds_rare	Chr3	12151973	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	1	C62
lof_cds	Chr3	12151981	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	3	B90,B92,C75
typical_cds_rare	Chr3	12151981	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1	3	B90,B92,C75
typical_cds_rare	Chr3	12152055	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B106,B119,B125,B97
lof_cds	Chr3	12152070	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	5	A15,A23,B24,B31,B44
typical_cds_rare	Chr3	12152070	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	5	A15,A23,B24,B31,B44
typical_cds_rare	Chr3	12152097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	1	B23
typical_cds_rare	Chr3	12152107	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B16,B64,C4,C50
lof_cds	Chr3	12152145	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B16,B64,C4,C50
typical_cds_rare	Chr3	12152145	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B16,B64,C4,C50
lof_cds	Chr3	12152146	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B16,B64,C4,C50
typical_cds_rare	Chr3	12152146	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B16,B64,C4,C50
typical_cds_rare	Chr3	12152229	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	1	B85
lof_cds	Chr3	12152243	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	3	B90,B92,C75
typical_cds_rare	Chr3	12152243	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	3	B90,B92,C75
lof_cds	Chr3	12152292	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	137	A1,A13,A14,A15,A16,A18,A20,A22,A4,A6,A7,A9,B1,B100,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B115,B119,B120,B121,B122,B123,B125,B126,B129,B132,B133,B135,B136,B137,B139,B14,B140,B16,B19,B21,B22,B25,B26,B27,B28,B29,B3,B30,B31,B33,B34,B35,B36,B37,B4,B41,B42,B43,B45,B47,B51,B56,B58,B6,B61,B64,B65,B67,B68,B72,B74,B78,B8,B80,B81,B83,B86,B87,B9,B93,B95,B96,B97,B98,C10,C13,C15,C17,C19,C2,C20,C24,C25,C27,C28,C29,C30,C32,C33,C36,C4,C40,C41,C42,C46,C49,C52,C55,C56,C57,C59,C6,C60,C62,C64,C65,C66,C68,C69,C74,C76,C77,C79,C80,C81,C84,C85,D11,D3,D4,D6,D7,D8
lof_cds	Chr3	12152297	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	137	A1,A13,A14,A15,A16,A18,A20,A22,A4,A6,A7,A9,B1,B100,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B115,B119,B120,B121,B122,B123,B125,B126,B129,B132,B133,B135,B136,B137,B139,B14,B140,B16,B19,B21,B22,B25,B26,B27,B28,B29,B3,B30,B31,B33,B34,B35,B36,B37,B4,B41,B42,B43,B45,B47,B51,B56,B58,B6,B61,B64,B65,B67,B68,B72,B74,B78,B8,B80,B81,B83,B86,B87,B9,B93,B95,B96,B97,B98,C10,C13,C15,C17,C19,C2,C20,C24,C25,C27,C28,C29,C30,C32,C33,C36,C4,C40,C41,C42,C46,C49,C52,C55,C56,C57,C59,C6,C60,C62,C64,C65,C66,C68,C69,C74,C76,C77,C79,C80,C81,C84,C85,D11,D3,D4,D6,D7,D8
typical_cds_rare	Chr3	12152311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	2	B10,D5
lof_cds	Chr3	12152334	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	2	B31,C18
typical_cds_rare	Chr3	12152334	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	2	B31,C18
typical_cds_rare	Chr3	12152387	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B106,B2,B85,C37
typical_cds_rare	Chr3	12152537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	2	B74,C14
typical_cds_rare	Chr3	12152573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	4	B137,B16,B45,C40
typical_cds_rare	Chr3	12152598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	3	A24,C52,C74
lof_cds	Chr3	12152617	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	147	A10,A11,A15,A16,A2,A20,A21,A23,A25,A3,A4,A6,A7,A9,B101,B102,B108,B110,B111,B112,B114,B115,B117,B120,B122,B123,B124,B126,B127,B128,B129,B130,B132,B133,B134,B137,B138,B139,B140,B15,B19,B20,B24,B26,B3,B32,B33,B35,B36,B37,B38,B39,B40,B41,B43,B46,B47,B49,B5,B51,B53,B56,B57,B58,B59,B61,B63,B65,B7,B74,B75,B77,B79,B82,B84,B86,B9,B90,B91,B92,B94,B95,B96,B97,B99,C1,C11,C13,C14,C15,C16,C18,C19,C2,C20,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C33,C38,C39,C40,C43,C44,C45,C46,C47,C51,C53,C54,C58,C59,C6,C61,C62,C63,C64,C66,C67,C69,C7,C70,C71,C72,C75,C77,C78,C8,C81,C83,C85,C86,C87,D3,D4,D5,D6,D7,D9
lof_cds	Chr3	12152625	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	3	B132,B38,B56
typical_cds_rare	Chr3	12152625	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	3	B132,B38,B56
typical_cds_rare	Chr3	12152715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	1	C14
typical_cds_rare	Chr3	12152724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017564	SmilChr03G001043	131017564	rna-XM_057946365.1,rna-XM_057946366.1	1	C14