source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	12196991	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12196991	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12196993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B65,B78
typical_cds_rare	Chr3	12197014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B96,C70
lof_cds	Chr3	12197032	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12197032	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12197053	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A5,B126,B21,B78,C66
lof_cds	Chr3	12197096	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12197096	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B73
typical_cds_rare	Chr3	12197108	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B107,B122,B49
typical_cds_rare	Chr3	12197121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B127,B16,C12,C68
lof_cds	Chr3	12197130	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B99,C13,C2,C52
typical_cds_rare	Chr3	12197130	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B99,C13,C2,C52
typical_cds_rare	Chr3	12197159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	C1,C13,C56,D6
typical_cds_rare	Chr3	12197168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B16,B75
typical_cds_rare	Chr3	12197182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B7,C44,C64,C66
typical_cds_rare	Chr3	12197184	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B118,B46,B65
lof_cds	Chr3	12197195	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	7	B135,B17,B23,B45,B76,C48,C52
typical_cds_rare	Chr3	12197206	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A2,B38,C79
typical_cds_rare	Chr3	12197224	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B38,B46,B65,B68
typical_cds_rare	Chr3	12197227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C38
typical_cds_rare	Chr3	12197238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B19,B26,B64
lof_cds	Chr3	12197250	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A10,B48,C45,D10,D5
typical_cds_rare	Chr3	12197250	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A10,B48,C45,D10,D5
typical_cds_rare	Chr3	12197312	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B88
typical_cds_rare	Chr3	12197315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B88
typical_cds_rare	Chr3	12197317	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B40,C20
typical_cds_rare	Chr3	12197319	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B38,B74,C7
typical_cds_rare	Chr3	12197326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	A21,B2,C23,C50
typical_cds_rare	Chr3	12197340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B38,B74,C7
typical_cds_rare	Chr3	12197341	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	A5,B110,B18,C12
typical_cds_rare	Chr3	12197370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B140,B88,B91
typical_cds_rare	Chr3	12197379	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A21,A24,B118,B46,C61
lof_cds	Chr3	12197381	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	13	A20,B135,B7,B85,C24,C33,C63,C64,C66,C68,C78,C85,D3
lof_cds	Chr3	12197382	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	13	A20,B135,B7,B85,C24,C33,C63,C64,C66,C68,C78,C85,D3
lof_cds	Chr3	12197383	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B127
typical_cds_rare	Chr3	12197383	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B127
lof_cds	Chr3	12197407	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	13	B103,B105,B136,B140,B20,B41,B68,B73,B88,B91,C3,C34,C72
lof_cds	Chr3	12197410	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	9	B103,B105,B20,B41,B68,B73,C3,C34,C72
typical_cds_rare	Chr3	12197416	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B7,C77
lof_cds	Chr3	12197430	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B114,B25,C41,C48,C84
typical_cds_rare	Chr3	12197430	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B114,B25,C41,C48,C84
typical_cds_rare	Chr3	12197437	TTA	*	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A14,B123,B72
typical_cds_rare	Chr3	12197453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B103,B119,B12,B122,B9
lof_cds	Chr3	12197458	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	6	B22,B29,B6,C32,C62,C68
lof_cds	Chr3	12197463	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	32	A2,A3,B109,B117,B119,B134,B136,B138,B17,B20,B25,B28,B33,B35,B61,B88,C20,C25,C26,C27,C30,C35,C43,C5,C50,C7,C70,C75,C79,C8,C82,D8
typical_cds_rare	Chr3	12197467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B137,C82
typical_cds_rare	Chr3	12197473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C15,C37
lof_cds	Chr3	12197498	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A9,C62,C71
typical_cds_rare	Chr3	12197498	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A9,C62,C71
typical_cds_rare	Chr3	12197499	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A9,C62,C71
lof_cds	Chr3	12197530	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	32	A1,A2,A22,A3,A4,B10,B131,B134,B135,B16,B18,B29,B37,B58,B93,B98,C15,C25,C27,C36,C42,C47,C51,C57,C58,C59,C60,C62,C66,C81,C9,D6
lof_cds	Chr3	12197533	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	32	A1,A2,A22,A3,A4,B10,B131,B134,B135,B16,B18,B29,B37,B58,B93,B98,C15,C25,C27,C36,C42,C47,C51,C57,C58,C59,C60,C62,C66,C81,C9,D6
lof_cds	Chr3	12197547	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	26	A1,A22,A3,B131,B134,B135,B16,B29,B37,B58,B93,B98,C15,C25,C27,C36,C42,C46,C51,C57,C58,C59,C63,C66,C81,D6
lof_cds	Chr3	12197552	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	22	A1,A22,A3,B131,B134,B29,B37,B58,B93,B98,C15,C25,C27,C36,C42,C51,C57,C58,C59,C63,C66,C81
typical_cds_rare	Chr3	12197593	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C36,C68
typical_cds_rare	Chr3	12197638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B18,B7,C24,C33,C62
typical_cds_rare	Chr3	12197676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A4,A5,C25
typical_cds_rare	Chr3	12197690	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B10,B103,B110,B71,C25
typical_cds_rare	Chr3	12197712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B87,C62
typical_cds_rare	Chr3	12197713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B108,B16,B18,B74,C39
typical_cds_rare	Chr3	12197726	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B102,B85,C33,C66,D5
typical_cds_rare	Chr3	12197735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B10,C55,C57,C76
lof_cds	Chr3	12197757	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	9	B130,B29,B34,B40,B6,B81,B92,C1,C83
lof_cds	Chr3	12197783	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B77,C29,C79
typical_cds_rare	Chr3	12197783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B77,C29,C79
typical_cds_rare	Chr3	12197831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B7,B82,C77,C8,C9
typical_cds_rare	Chr3	12197834	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B87
lof_cds	Chr3	12197893	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A7,C20,C33
typical_cds_rare	Chr3	12197893	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A7,C20,C33
typical_cds_rare	Chr3	12197908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B71,C87
lof_cds	Chr3	12197972	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B107,B122
typical_cds_rare	Chr3	12197972	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B107,B122
lof_cds	Chr3	12197993	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B40
typical_cds_rare	Chr3	12197993	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B40
typical_cds_rare	Chr3	12197996	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C12,C62
typical_cds_rare	Chr3	12198046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C78
typical_cds_rare	Chr3	12198047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C12
typical_cds_rare	Chr3	12198081	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C78
lof_cds	Chr3	12198092	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B14,B17,C21,C80
typical_cds_rare	Chr3	12198092	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B14,B17,C21,C80
typical_cds_rare	Chr3	12198097	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B8
typical_cds_rare	Chr3	12198129	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B115,B19,B5,D4
typical_cds_rare	Chr3	12198199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B125
typical_cds_rare	Chr3	12198232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B2,D3
typical_cds_rare	Chr3	12198265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C30,C87
lof_cds	Chr3	12198289	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B64,C49
typical_cds_rare	Chr3	12198289	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B64,C49
typical_cds_rare	Chr3	12198323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B75
typical_cds_rare	Chr3	12198330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B2,C55,C62,D10
typical_cds_rare	Chr3	12198361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B119,B5,B64,C49
typical_cds_rare	Chr3	12198409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B55,C31
typical_cds_rare	Chr3	12198414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B125
typical_cds_rare	Chr3	12198417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B48,C45,D3,D5
typical_cds_rare	Chr3	12198424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	A21,B118
lof_cds	Chr3	12198430	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	34	A22,A3,A7,B135,B20,B23,B39,B49,B50,B53,B59,B6,B60,B64,B75,B79,B99,C1,C11,C22,C23,C26,C31,C33,C34,C48,C54,C58,C61,C63,C64,C67,C69,D9
typical_cds_rare	Chr3	12198451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B110,B125,B89
typical_cds_rare	Chr3	12198473	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B100,B137,B45,C15,C8
typical_cds_rare	Chr3	12198474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B65,B72,C20
typical_cds_rare	Chr3	12198484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	C15,C32,C33,D3,D9
typical_cds_rare	Chr3	12198490	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B105
lof_cds	Chr3	12198543	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B65,B72,C20
typical_cds_rare	Chr3	12198543	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B65,B72,C20
typical_cds_rare	Chr3	12198584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B105,C80
lof_cds	Chr3	12198629	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	11	A8,B21,B31,B54,B65,B87,C20,C35,C5,C6,C80
lof_cds	Chr3	12198640	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	7	B124,B61,B64,B91,C24,C64,C85
typical_cds_rare	Chr3	12198658	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A1,B18,B85,C37,C50
lof_cds	Chr3	12198659	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	6	A1,A14,B13,B27,B51,C73
lof_cds	Chr3	12198691	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B122,C72
typical_cds_rare	Chr3	12198691	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B122,C72
typical_cds_rare	Chr3	12198718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B122
lof_cds	Chr3	12198721	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	28	A15,A6,B111,B114,B22,B23,B25,B27,B47,B56,B69,B74,B80,B93,B96,C14,C27,C39,C41,C45,C5,C50,C62,C76,C81,C84,D10,D11
lof_cds	Chr3	12198730	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B110,B27,B45,B97,C59
typical_cds_rare	Chr3	12198730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B110,B27,B45,B97,C59
typical_cds_rare	Chr3	12198749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	A11,C71
typical_cds_rare	Chr3	12198761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B102,C67,C68
typical_cds_rare	Chr3	12198783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	A5
typical_cds_rare	Chr3	12198810	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B94
typical_cds_rare	Chr3	12198830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B105,B130,B75
typical_cds_rare	Chr3	12198835	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B13
lof_cds	Chr3	12198839	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C19,C72
typical_cds_rare	Chr3	12198839	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C19,C72
lof_cds	Chr3	12198841	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	7	A9,B10,B103,B110,B81,C76,C87
typical_cds_rare	Chr3	12198844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C72
typical_cds_rare	Chr3	12198858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A2,B135,B2,C33,D3
lof_cds	Chr3	12198867	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	17	A14,B115,B12,B128,B129,B15,B78,C12,C14,C4,C50,C6,C65,C7,C71,C78,D1
typical_cds_rare	Chr3	12198878	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C72
typical_cds_rare	Chr3	12198882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B7,B76,B80,B85,C32
lof_cds	Chr3	12198937	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B124,B125,B64,C79,C85
typical_cds_rare	Chr3	12198937	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B124,B125,B64,C79,C85
typical_cds_rare	Chr3	12199013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B110,B63,D1
typical_cds_rare	Chr3	12199018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B75
typical_cds_rare	Chr3	12199061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B94
typical_cds_rare	Chr3	12199076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B100,B135,B68,C52,C8
typical_cds_rare	Chr3	12199079	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C4
lof_cds	Chr3	12199165	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B25,C14,C50,D10
typical_cds_rare	Chr3	12199165	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B25,C14,C50,D10
lof_cds	Chr3	12199183	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A11,B112,B131,C62,D6
typical_cds_rare	Chr3	12199183	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	A11,B112,B131,C62,D6
lof_cds	Chr3	12199221	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B65
typical_cds_rare	Chr3	12199221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B65
typical_cds_rare	Chr3	12199231	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B68,B93,C14,D10
lof_cds	Chr3	12199237	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B123,B79
typical_cds_rare	Chr3	12199237	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	B123,B79
typical_cds_rare	Chr3	12199243	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C11
typical_cds_rare	Chr3	12199257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B123
lof_cds	Chr3	12199289	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	32	A19,A5,B100,B117,B129,B13,B131,B132,B133,B139,B14,B37,B39,B42,B49,B54,B57,B66,B70,B78,B87,B93,C15,C40,C50,C55,C56,C65,C70,C82,D2,D7
typical_cds_rare	Chr3	12199306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	2	C48,C7
typical_cds_rare	Chr3	12199311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C33
typical_cds_rare	Chr3	12199314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B21,C16,C51
typical_cds_rare	Chr3	12199320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	C30
typical_cds_rare	Chr3	12199321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B107,B120,B139,B31,C72
lof_cds	Chr3	12199325	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B131
typical_cds_rare	Chr3	12199325	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	1	B131
typical_cds_rare	Chr3	12199358	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	5	B66,B7,C66,C71,D11
typical_cds_rare	Chr3	12199367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	4	B115,B134,B16,B24
lof_cds	Chr3	12199368	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B139,B59,B87
typical_cds_rare	Chr3	12199368	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	B139,B59,B87
typical_cds_rare	Chr3	12199380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	3	A2,B93,D2
lof_cds	Chr3	12199427	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018335	SmilChr03G001047	131018335	rna-XM_057947061.1	23	B125,B130,B14,B17,B34,B57,B6,B84,B88,C1,C13,C19,C20,C34,C37,C40,C44,C56,C6,C67,C71,C80,D6