source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	12541569	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A20,B109,B22
typical_cds_rare	Chr3	12541588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	2	A20,B22
typical_cds_rare	Chr3	12541617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	4	B99,C58,C61,C63
typical_cds_rare	Chr3	12541626	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	B101,B61,B87
typical_cds_rare	Chr3	12541637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	B127,B5,B57
lof_cds	Chr3	12541656	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A16,D4,D6
typical_cds_rare	Chr3	12541656	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A16,D4,D6
lof_cds	Chr3	12541671	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	D8
typical_cds_rare	Chr3	12541671	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	D8
typical_cds_rare	Chr3	12541718	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	5	B3,B44,C47,C53,C86
lof_cds	Chr3	12541751	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	17	A18,B127,B129,B19,B29,B30,B34,B40,B72,B95,C32,C55,C58,C65,C68,C80,D8
lof_cds	Chr3	12541850	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	22	A21,B104,B129,B133,B18,B3,B39,B52,B64,B69,B80,C12,C23,C32,C37,C38,C47,C50,C54,C56,C62,C81
typical_cds_rare	Chr3	12541895	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	2	B21,B4
typical_cds_rare	Chr3	12541923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	B75
typical_cds_rare	Chr3	12541926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	B30
typical_cds_rare	Chr3	12541929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	B127,B54,B57
typical_cds_rare	Chr3	12541940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	5	B10,B3,B44,C47,C53
typical_cds_rare	Chr3	12541948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	B30
lof_cds	Chr3	12541987	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	B22
typical_cds_rare	Chr3	12541987	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	B22
typical_cds_rare	Chr3	12542062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	1	A9
lof_cds	Chr3	12542119	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	2	B18,B23
typical_cds_rare	Chr3	12542119	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	2	B18,B23
typical_cds_rare	Chr3	12542130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	4	A6,B133,B19,C32
lof_cds	Chr3	12542150	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	6	A16,B101,B136,B26,B4,D4
lof_cds	Chr3	12542168	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A6,B133,B28
typical_cds_rare	Chr3	12542168	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A6,B133,B28
lof_cds	Chr3	12542171	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A6,B133,B28
typical_cds_rare	Chr3	12542171	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A6,B133,B28
typical_cds_rare	Chr3	12542320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	B90,B92,C75
lof_cds	Chr3	12542364	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	27	A11,A3,B115,B20,B46,B49,B50,B53,B6,B60,B77,B79,B99,C11,C18,C22,C23,C33,C48,C58,C61,C63,C64,C66,C69,C83,C87
typical_cds_rare	Chr3	12542462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A8,B13,B4
typical_cds_rare	Chr3	12542465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A8,B13,B4
typical_cds_rare	Chr3	12542467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	B54,B57,B86
typical_cds_rare	Chr3	12542468	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A8,B13,B4
typical_cds_rare	Chr3	12542472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	3	A8,B13,B4
lof_cds	Chr3	12542547	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	4	A21,B107,B65,C23
typical_cds_rare	Chr3	12542547	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131017569	SmilChr03G001083	131017569	rna-XM_057946370.1	4	A21,B107,B65,C23