source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	12574081	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	26	A18,A5,B100,B113,B121,B15,B21,B26,B29,B33,B40,B54,B74,B79,B90,C25,C27,C28,C33,C37,C4,C49,C53,C57,C83,C9
lof_cds	Chr3	12574092	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	112	A1,A15,A16,A18,A21,A25,A5,A9,B10,B101,B102,B103,B105,B107,B109,B11,B111,B112,B118,B120,B122,B123,B127,B128,B134,B136,B139,B18,B19,B2,B21,B25,B26,B28,B3,B30,B31,B33,B37,B4,B40,B41,B42,B43,B44,B5,B53,B54,B57,B58,B59,B63,B65,B66,B67,B74,B75,B79,B81,B82,B83,B84,B85,B88,B89,B90,B91,B92,B93,B94,B95,B97,B99,C1,C13,C14,C16,C22,C25,C28,C3,C34,C35,C39,C4,C40,C46,C47,C49,C53,C54,C55,C57,C63,C64,C66,C7,C70,C71,C75,C76,C77,C8,C82,C86,C87,C9,D1,D11,D4,D6,D8
typical_cds_rare	Chr3	12574117	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D6
lof_cds	Chr3	12574126	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	62	A16,A20,A21,A5,B10,B103,B105,B112,B118,B120,B127,B128,B18,B19,B21,B29,B31,B37,B42,B43,B5,B54,B57,B58,B62,B66,B74,B79,B82,B84,B85,B88,B91,B93,B94,B95,C1,C13,C16,C22,C24,C3,C34,C35,C39,C40,C46,C49,C53,C54,C55,C57,C63,C64,C66,C7,C70,C71,C78,C87,C9,D1
lof_cds	Chr3	12574128	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	62	A16,A20,A21,A5,B10,B103,B105,B112,B118,B120,B127,B128,B18,B19,B21,B29,B31,B37,B42,B43,B5,B54,B57,B58,B62,B66,B74,B79,B82,B84,B85,B88,B91,B93,B94,B95,C1,C13,C16,C22,C24,C3,C34,C35,C39,C40,C46,C49,C53,C54,C55,C57,C63,C64,C66,C7,C70,C71,C78,C87,C9,D1
typical_cds_rare	Chr3	12574148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D6
typical_cds_rare	Chr3	12574163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B100
typical_cds_rare	Chr3	12574177	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	A5,B26,C30,C48
lof_cds	Chr3	12574224	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	35	B105,B112,B118,B120,B15,B18,B31,B37,B43,B54,B58,B62,B79,B85,B94,B97,C1,C13,C16,C22,C34,C35,C40,C46,C5,C54,C57,C63,C64,C66,C7,C70,C71,C72,C9
lof_cds	Chr3	12574230	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B89
typical_cds_rare	Chr3	12574230	G	GCC	INDEL	2bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B89
lof_cds	Chr3	12574236	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	12	B109,B113,B122,B139,B36,B45,B9,C37,C43,C60,C68,C82
lof_cds	Chr3	12574260	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C20
typical_cds_rare	Chr3	12574260	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C20
typical_cds_rare	Chr3	12574269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B75
typical_cds_rare	Chr3	12574309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B122,C68,C84
typical_cds_rare	Chr3	12574345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A13,A25,B9
typical_cds_rare	Chr3	12574372	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C29
lof_cds	Chr3	12574462	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	A6,C56
typical_cds_rare	Chr3	12574462	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	A6,C56
lof_cds	Chr3	12574508	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B19
typical_cds_rare	Chr3	12574508	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B19
lof_cds	Chr3	12574511	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B19
typical_cds_rare	Chr3	12574511	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B19
typical_cds_rare	Chr3	12574512	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B14,C77
typical_cds_rare	Chr3	12574553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A14,C49,C53
typical_cds_rare	Chr3	12574573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	A11,B140,C14,C23,C62
typical_cds_rare	Chr3	12574601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C7
lof_cds	Chr3	12574604	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	6	A1,B124,B16,B39,C26,C69
typical_cds_rare	Chr3	12574607	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C14
typical_cds_rare	Chr3	12574624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B4,C67,D2
typical_cds_rare	Chr3	12574651	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B115,C30
typical_cds_rare	Chr3	12574661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	A9
lof_cds	Chr3	12574696	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	A21
typical_cds_rare	Chr3	12574696	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	A21
typical_cds_rare	Chr3	12574767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B126,B82,C10,C67
typical_cds_rare	Chr3	12574778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B42
lof_cds	Chr3	12574788	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	43	A1,A10,A13,A24,A8,B10,B121,B124,B126,B128,B13,B16,B19,B25,B27,B31,B35,B5,B53,B56,B66,B70,B77,B82,B83,B85,B89,B90,C11,C25,C26,C3,C61,C64,C66,C67,C69,C74,C75,C83,C87,D3,D9
lof_cds	Chr3	12574789	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	43	A1,A10,A13,A24,A8,B10,B121,B124,B126,B128,B13,B16,B19,B25,B27,B31,B35,B5,B53,B56,B66,B70,B77,B82,B83,B85,B89,C11,C25,C26,C3,C60,C61,C64,C66,C67,C69,C74,C75,C83,C87,D3,D9
typical_cds_rare	Chr3	12574800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B13,B25,B27,D9
lof_cds	Chr3	12574812	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C3,D6
typical_cds_rare	Chr3	12574812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C3,D6
lof_cds	Chr3	12574821	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B63,B83,D8
typical_cds_rare	Chr3	12574821	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B63,B83,D8
typical_cds_rare	Chr3	12574831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B114,B88,C2,C81,C82
typical_cds_rare	Chr3	12574840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C21
lof_cds	Chr3	12574849	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	11	B105,B112,B24,B28,B40,B73,B83,B93,C53,C70,D8
lof_cds	Chr3	12574850	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B112,B28,B73,D8
typical_cds_rare	Chr3	12574850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B112,B28,B73,D8
typical_cds_rare	Chr3	12574957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B104
typical_cds_rare	Chr3	12574963	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B104,D11
typical_cds_rare	Chr3	12574970	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B117,B129,C1
typical_cds_rare	Chr3	12574971	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C12,C59
typical_cds_rare	Chr3	12574985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D6
typical_cds_rare	Chr3	12575011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	A11,C62
typical_cds_rare	Chr3	12575020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B117,B129,C1
typical_cds_rare	Chr3	12575053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B94
lof_cds	Chr3	12575057	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B122
typical_cds_rare	Chr3	12575057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B122
typical_cds_rare	Chr3	12575083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B13,B7,C15,C22,C84
typical_cds_rare	Chr3	12575099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B99,D9
typical_cds_rare	Chr3	12575167	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B23
lof_cds	Chr3	12575249	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	13	B10,B136,B34,B41,B55,B63,B68,B77,B84,C21,C22,C27,D10
typical_cds_rare	Chr3	12575335	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	A1,B81,B85,C37,C50
lof_cds	Chr3	12575338	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	A1,B81,B85,C37,C50
typical_cds_rare	Chr3	12575338	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	A1,B81,B85,C37,C50
lof_cds	Chr3	12575368	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	119	A1,A15,A19,A2,A21,A23,A24,A25,A4,A7,B100,B101,B108,B109,B111,B112,B113,B114,B115,B119,B122,B124,B128,B130,B134,B137,B14,B140,B15,B2,B20,B23,B24,B26,B29,B30,B32,B33,B36,B38,B39,B41,B43,B45,B46,B47,B5,B50,B56,B63,B64,B66,B67,B68,B7,B70,B71,B72,B73,B74,B76,B78,B8,B80,B81,B82,B85,B87,B89,B95,B96,B99,C14,C17,C18,C19,C2,C24,C25,C26,C28,C30,C31,C32,C33,C34,C37,C38,C4,C40,C41,C42,C44,C45,C46,C5,C50,C53,C54,C55,C56,C57,C60,C62,C63,C68,C70,C71,C79,C8,C80,C81,C82,C85,D1,D2,D4,D5,D7
lof_cds	Chr3	12575413	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	19	B108,B115,B117,B124,B134,B20,B22,B30,B43,B72,B87,C1,C15,C22,C26,C31,C48,C49,C58
typical_cds_rare	Chr3	12575415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B117,B27,C81,D7
lof_cds	Chr3	12575455	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	9	A18,B40,B41,B51,B7,C15,C22,C49,C6
typical_cds_rare	Chr3	12575476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B7
lof_cds	Chr3	12575490	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D11
typical_cds_rare	Chr3	12575490	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D11
lof_cds	Chr3	12575595	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B105,C40
typical_cds_rare	Chr3	12575595	TGC	T	INDEL	2bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B105,C40
lof_cds	Chr3	12575654	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B135,B27,C38,C74,C84
typical_cds_rare	Chr3	12575654	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B135,B27,C38,C74,C84
typical_cds_rare	Chr3	12575661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C79,D3
typical_cds_rare	Chr3	12575667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B107,B122,B67,C4,C46
lof_cds	Chr3	12575697	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	7	A18,B10,B3,B44,C47,C53,C86
typical_cds_rare	Chr3	12575713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B107,B122,B67,C4,C46
typical_cds_rare	Chr3	12575734	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B24,B59,B89,C15,C16
lof_cds	Chr3	12575737	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B79,C30,C65
typical_cds_rare	Chr3	12575737	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B79,C30,C65
typical_cds_rare	Chr3	12575820	AT	*	INDEL	1bp_deletion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B1,B126,C52
typical_cds_rare	Chr3	12575833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	D11
typical_cds_rare	Chr3	12575872	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B73,C72,C86
typical_cds_rare	Chr3	12575894	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B79,D3
lof_cds	Chr3	12575899	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	114	A1,A11,A13,A14,A16,A19,A20,A24,A25,A3,A7,A8,B104,B105,B110,B114,B117,B118,B119,B12,B120,B123,B124,B130,B132,B134,B136,B19,B2,B26,B27,B28,B29,B3,B32,B36,B40,B42,B47,B49,B5,B50,B52,B55,B6,B60,B61,B62,B64,B67,B73,B75,B76,B79,B8,B84,B86,B88,B90,B93,B94,B96,B98,C10,C12,C14,C16,C17,C2,C20,C23,C24,C25,C29,C32,C34,C36,C37,C39,C4,C41,C43,C45,C46,C47,C48,C49,C50,C51,C54,C55,C56,C58,C60,C62,C66,C67,C68,C69,C7,C70,C72,C75,C76,C79,C80,C82,C83,C86,C87,C9,D1,D10,D4
lof_cds	Chr3	12575902	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	103	A1,A11,A13,A14,A19,A20,A24,A25,A3,A7,A8,B104,B110,B114,B117,B119,B12,B123,B124,B130,B132,B19,B2,B27,B28,B29,B3,B32,B36,B40,B42,B46,B47,B49,B5,B50,B52,B55,B6,B60,B61,B62,B64,B67,B73,B75,B76,B79,B8,B84,B86,B88,B93,B94,B96,B98,C10,C12,C14,C16,C17,C2,C20,C23,C24,C29,C32,C34,C36,C37,C39,C4,C41,C43,C45,C46,C47,C48,C49,C50,C51,C54,C55,C56,C58,C60,C62,C66,C67,C68,C69,C7,C70,C72,C76,C79,C80,C83,C86,C87,C9,D1,D10
typical_cds_rare	Chr3	12575915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B123,B2,C27,C28,C60
lof_cds	Chr3	12575916	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	102	A1,A13,A14,A19,A20,A24,A25,A3,A6,A8,A9,B104,B105,B114,B117,B119,B12,B123,B124,B130,B132,B139,B19,B2,B22,B27,B28,B29,B3,B32,B36,B40,B46,B5,B52,B55,B6,B60,B61,B62,B64,B7,B73,B75,B76,B8,B84,B86,B87,B88,B90,B93,B94,B96,B98,C10,C12,C14,C16,C17,C2,C20,C23,C24,C27,C28,C29,C32,C34,C36,C37,C39,C4,C41,C43,C46,C47,C48,C5,C50,C54,C55,C56,C58,C60,C66,C67,C68,C7,C70,C72,C75,C79,C80,C82,C83,C86,C9,D1,D10,D11,D6
typical_cds_rare	Chr3	12575941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B32
typical_cds_rare	Chr3	12575955	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B119,B124,B18,B61
lof_cds	Chr3	12575982	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	9	A3,A8,B117,B12,B52,B90,C32,C46,C82
typical_cds_rare	Chr3	12575995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B66,B89
typical_cds_rare	Chr3	12576032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	A25,B11,B74,C14
typical_cds_rare	Chr3	12576064	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	C32
typical_cds_rare	Chr3	12576080	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B13
typical_cds_rare	Chr3	12576109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B15
typical_cds_rare	Chr3	12576177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C12,C59
typical_cds_rare	Chr3	12576192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A11,B21,B71
typical_cds_rare	Chr3	12576210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B107,B125,B90,B92,C21
typical_cds_rare	Chr3	12576223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B125,B90,B92,C21
typical_cds_rare	Chr3	12576253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B14,C77
lof_cds	Chr3	12576279	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A11,A18,C62
typical_cds_rare	Chr3	12576279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A11,A18,C62
typical_cds_rare	Chr3	12576280	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B122,B125,B90,B92,C21
typical_cds_rare	Chr3	12576293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B122,B125,B90,B92,C21
typical_cds_rare	Chr3	12576299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B125,B90,B92,C21
typical_cds_rare	Chr3	12576394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	A20,B59,D3
typical_cds_rare	Chr3	12576442	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B87
typical_cds_rare	Chr3	12576465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	C37,C54
typical_cds_rare	Chr3	12576483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	2	B15,C77
typical_cds_rare	Chr3	12576506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B122
lof_cds	Chr3	12576545	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B56
typical_cds_rare	Chr3	12576545	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B56
lof_cds	Chr3	12576546	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B109
typical_cds_rare	Chr3	12576546	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	1	B109
typical_cds_rare	Chr3	12576558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	3	B23,C30,C65
typical_cds_rare	Chr3	12576586	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	5	B6,C10,C2,C64,C83
typical_cds_rare	Chr3	12576617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	4	B27,C38,C74,C84
lof_cds	Chr3	12576665	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	78	A10,A18,A19,A2,A20,A23,A24,A3,B1,B10,B102,B103,B104,B11,B111,B113,B114,B119,B122,B125,B126,B129,B132,B134,B136,B14,B15,B18,B20,B21,B23,B28,B29,B3,B39,B44,B45,B47,B48,B52,B57,B60,B61,B66,B69,B75,B8,B83,B87,B88,B94,B95,B96,C14,C16,C22,C27,C34,C40,C41,C43,C45,C49,C53,C56,C59,C60,C62,C73,C74,C77,C78,C79,C86,D10,D5,D7,D8
lof_cds	Chr3	12576672	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018345	SmilChr03G001087	131018345	rna-XM_057947072.1	14	A22,B104,B121,B128,B134,B39,B77,B83,B92,B94,B98,C26,C61,D5