source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	12794936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	3	A24,B108,C15
typical_cds_rare	Chr3	12794937	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B2
lof_cds	Chr3	12794943	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	22	A2,A3,B100,B103,B11,B119,B126,B13,B138,B17,B20,B32,B33,B38,B39,B5,B54,B93,C14,C19,C49,C53
lof_cds	Chr3	12794951	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	22	A2,A3,B100,B103,B11,B119,B126,B13,B138,B17,B20,B32,B33,B38,B39,B5,B54,B93,C14,C19,C49,C53
lof_cds	Chr3	12794958	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B108,C15
typical_cds_rare	Chr3	12794958	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B108,C15
typical_cds_rare	Chr3	12794968	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	4	B63,B83,C32,C68
lof_cds	Chr3	12794977	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B108,C15
typical_cds_rare	Chr3	12794977	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B108,C15
typical_cds_rare	Chr3	12795011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	3	B111,B2,C15
typical_cds_rare	Chr3	12795019	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B94
lof_cds	Chr3	12795028	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B131
typical_cds_rare	Chr3	12795028	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B131
typical_cds_rare	Chr3	12795068	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	3	C21,C4,C60
typical_cds_rare	Chr3	12795164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B22,C39
typical_cds_rare	Chr3	12795171	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B138,B17
lof_cds	Chr3	12795174	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795174	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
lof_cds	Chr3	12795175	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795175	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
lof_cds	Chr3	12795181	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795181	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
lof_cds	Chr3	12795188	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795188	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
lof_cds	Chr3	12795193	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795193	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B14
typical_cds_rare	Chr3	12795214	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	C42,D10
lof_cds	Chr3	12795232	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	48	A23,A25,A5,A6,B10,B103,B104,B105,B11,B111,B112,B120,B122,B127,B128,B133,B15,B18,B28,B37,B49,B5,B57,B58,B62,B63,B7,B75,B77,B84,B88,B95,B97,B98,C1,C16,C18,C3,C32,C34,C39,C5,C54,C57,C68,C83,C9,D11
lof_cds	Chr3	12795255	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	4	B63,B83,C32,C68
typical_cds_rare	Chr3	12795255	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	4	B63,B83,C32,C68
typical_cds_rare	Chr3	12795314	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	A20
typical_cds_rare	Chr3	12795320	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	A20,B81
lof_cds	Chr3	12795352	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B43
typical_cds_rare	Chr3	12795352	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	B43
typical_cds_rare	Chr3	12795373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	2	B2,B31
lof_cds	Chr3	12795398	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	5	B138,B14,B3,B84,C56
typical_cds_rare	Chr3	12795398	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	5	B138,B14,B3,B84,C56
lof_cds	Chr3	12795399	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	5	B138,B14,B3,B84,C56
typical_cds_rare	Chr3	12795399	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	5	B138,B14,B3,B84,C56
lof_cds	Chr3	12795462	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	C21
typical_cds_rare	Chr3	12795462	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	C21
lof_cds	Chr3	12795466	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	D2
typical_cds_rare	Chr3	12795466	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	1	D2
lof_cds	Chr3	12795577	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	8	A22,B82,C21,C31,C34,C4,C60,C63
lof_cds	Chr3	12795580	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	81	A11,A18,A22,A23,A25,A5,A6,B10,B103,B104,B105,B11,B111,B112,B119,B120,B126,B127,B128,B13,B133,B137,B138,B14,B15,B17,B18,B28,B3,B32,B33,B37,B42,B47,B49,B5,B54,B56,B57,B58,B62,B63,B7,B75,B77,B82,B84,B88,B93,B95,B96,B97,B98,C1,C12,C16,C18,C19,C21,C3,C30,C31,C32,C34,C39,C4,C5,C53,C54,C56,C57,C60,C63,C67,C68,C80,C83,C84,C9,D11,D5
lof_cds	Chr3	12795582	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018356	SmilChr03G001110	131018356	rna-XM_057947086.1	81	A11,A18,A22,A23,A25,A5,A6,B10,B103,B104,B105,B11,B111,B112,B119,B120,B126,B127,B128,B13,B133,B137,B138,B14,B15,B17,B18,B28,B3,B32,B33,B37,B42,B47,B49,B5,B54,B56,B57,B58,B62,B63,B7,B75,B77,B82,B84,B88,B93,B95,B96,B97,B98,C1,C12,C16,C18,C19,C21,C3,C30,C31,C32,C34,C39,C4,C5,C53,C54,C56,C57,C60,C63,C67,C68,C80,C83,C84,C9,D11,D5