source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	12884798	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B40,C58
typical_cds_rare	Chr3	12884799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	4	B130,B31,B6,C19
lof_cds	Chr3	12885163	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B6,B7,B74,C19,C77
typical_cds_rare	Chr3	12885163	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B6,B7,B74,C19,C77
lof_cds	Chr3	12885198	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B6,B7,B74,C19,C77
typical_cds_rare	Chr3	12885198	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B6,B7,B74,C19,C77
typical_cds_rare	Chr3	12885240	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B121,C77
typical_cds_rare	Chr3	12885276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	A11,B19,B21,B71,C62
typical_cds_rare	Chr3	12885304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B121,C53,C77
typical_cds_rare	Chr3	12885334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B63,B83,C32,C68,D6
typical_cds_rare	Chr3	12885374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	4	A24,B60,C52,C74
lof_cds	Chr3	12885395	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B121,C53,C77
typical_cds_rare	Chr3	12885395	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B121,C53,C77
lof_cds	Chr3	12885443	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B108,C36
typical_cds_rare	Chr3	12885443	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B108,C36
typical_cds_rare	Chr3	12885516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B10,B98,C18
typical_cds_rare	Chr3	12885540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B86
typical_cds_rare	Chr3	12885582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B122,D11
typical_cds_rare	Chr3	12885627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B41,B86,C29
typical_cds_rare	Chr3	12885697	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	A8,B30,B48
typical_cds_rare	Chr3	12885717	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	A11,B19,B21,B71,C62
typical_cds_rare	Chr3	12885779	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B30
lof_cds	Chr3	12885801	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	A8,B30,C28
typical_cds_rare	Chr3	12885801	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	A8,B30,C28
typical_cds_rare	Chr3	12885813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B122,B28
typical_cds_rare	Chr3	12885822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	A23
lof_cds	Chr3	12885868	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	56	A1,A10,A14,A16,A19,A22,A23,A4,B1,B10,B102,B112,B115,B130,B131,B133,B139,B14,B18,B2,B30,B31,B37,B41,B58,B6,B64,B7,B73,B74,B86,B88,B99,C10,C13,C18,C19,C20,C25,C28,C29,C46,C52,C53,C56,C63,C64,C66,C67,C70,C75,C76,C84,C9,D3,D6
lof_cds	Chr3	12885869	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	19	A11,B105,B11,B121,B128,B17,B21,B48,B59,B62,B76,B8,C30,C45,C53,C74,C77,C80,D10
lof_cds	Chr3	12885875	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	15	B101,B105,B108,B126,B27,B51,B65,B84,B91,C14,C2,C43,C70,D2,D8
typical_cds_rare	Chr3	12885976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B104
lof_cds	Chr3	12885996	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B100
typical_cds_rare	Chr3	12885996	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B100
lof_cds	Chr3	12886005	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	A8,C28
typical_cds_rare	Chr3	12886005	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	A8,C28
lof_cds	Chr3	12886024	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	84	A1,A10,A11,A14,A16,A19,A22,A23,A4,B1,B10,B102,B105,B112,B115,B117,B12,B121,B128,B130,B131,B133,B138,B139,B14,B17,B18,B2,B21,B29,B30,B31,B41,B42,B43,B48,B58,B59,B6,B63,B64,B7,B73,B74,B76,B8,B81,B86,B88,B99,C10,C13,C16,C19,C20,C25,C28,C29,C3,C30,C4,C41,C45,C46,C50,C52,C53,C56,C63,C64,C67,C70,C73,C74,C75,C77,C80,C84,C9,D10,D11,D2,D3,D6
lof_cds	Chr3	12886026	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	84	A1,A10,A11,A14,A16,A19,A22,A23,A4,B1,B10,B102,B105,B112,B115,B117,B12,B121,B128,B130,B131,B133,B138,B139,B14,B17,B18,B2,B21,B29,B30,B31,B41,B42,B43,B48,B58,B59,B6,B63,B64,B7,B73,B74,B76,B8,B81,B86,B88,B99,C10,C13,C16,C19,C20,C25,C28,C29,C3,C30,C4,C41,C45,C46,C50,C52,C53,C56,C63,C64,C67,C70,C73,C74,C75,C77,C80,C84,C9,D10,D11,D2,D3,D6
lof_cds	Chr3	12886054	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	33	A1,A10,A16,A23,B10,B102,B112,B115,B133,B139,B14,B29,B30,B31,B32,B58,B81,C10,C20,C25,C28,C41,C46,C52,C56,C64,C70,C73,C75,C84,C9,D3,D6
lof_cds	Chr3	12886095	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	A2,B140,B41,C10,C74
typical_cds_rare	Chr3	12886095	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	A2,B140,B41,C10,C74
lof_cds	Chr3	12886241	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	51	A11,A14,A19,A22,A23,A4,A9,B1,B105,B11,B12,B128,B130,B131,B17,B18,B2,B21,B41,B57,B59,B6,B62,B63,B64,B7,B73,B74,B76,B8,B86,B96,B99,C13,C16,C18,C19,C29,C3,C30,C33,C45,C53,C63,C65,C67,C74,C77,C80,C85,D11
lof_cds	Chr3	12886248	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	35	A14,A19,A22,A23,A4,A9,B1,B12,B130,B131,B18,B2,B41,B57,B6,B64,B7,B73,B74,B86,B99,C13,C16,C18,C19,C29,C3,C33,C53,C63,C65,C67,C77,C85,D11
lof_cds	Chr3	12886266	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	76	A1,A10,A14,A16,A19,A20,A22,A23,A3,A4,A9,B1,B10,B102,B115,B117,B12,B127,B130,B133,B139,B14,B140,B2,B29,B30,B31,B32,B35,B41,B42,B43,B48,B57,B58,B6,B64,B7,B73,B74,B81,B86,B90,B99,C1,C13,C16,C18,C19,C20,C25,C28,C29,C3,C33,C41,C46,C50,C52,C53,C56,C63,C64,C65,C66,C67,C70,C75,C76,C77,C84,C85,C9,D11,D3,D6
lof_cds	Chr3	12886275	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	89	A1,A10,A14,A16,A19,A20,A22,A23,A3,A4,A9,B1,B10,B101,B102,B105,B108,B115,B12,B126,B127,B130,B133,B139,B14,B140,B2,B27,B29,B30,B31,B32,B35,B41,B42,B43,B48,B54,B57,B58,B6,B64,B65,B7,B73,B74,B81,B84,B86,B90,B91,B99,C1,C13,C14,C16,C18,C19,C2,C20,C25,C28,C29,C3,C33,C41,C43,C46,C50,C52,C53,C56,C63,C64,C65,C66,C67,C70,C75,C76,C77,C84,C85,C9,D11,D2,D3,D6,D8
lof_cds	Chr3	12886281	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	71	A1,A10,A14,A19,A20,A23,A3,A4,A9,B1,B10,B102,B115,B12,B127,B133,B139,B14,B140,B17,B2,B29,B30,B31,B32,B35,B41,B42,B43,B57,B58,B6,B64,B7,B73,B74,B81,B86,B90,B99,C1,C13,C16,C18,C19,C20,C25,C28,C29,C3,C33,C41,C46,C50,C52,C53,C56,C63,C64,C65,C66,C67,C70,C75,C76,C77,C84,C85,C9,D3,D6
lof_cds	Chr3	12886285	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	73	A1,A10,A14,A19,A20,A23,A3,A4,A9,B1,B10,B102,B115,B12,B127,B130,B133,B139,B14,B140,B2,B29,B30,B31,B32,B35,B41,B42,B43,B57,B58,B6,B64,B7,B73,B74,B81,B86,B90,B99,C1,C13,C16,C18,C19,C20,C25,C28,C29,C3,C33,C41,C46,C50,C52,C53,C56,C63,C64,C65,C66,C67,C70,C75,C76,C77,C84,C85,C9,D10,D11,D3,D6
typical_cds_rare	Chr3	12886331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	C53,C77
typical_cds_rare	Chr3	12886340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B101,B40,C8
typical_cds_rare	Chr3	12886415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	5	B103,B105,B130,D10,D11
typical_cds_rare	Chr3	12886424	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	2	B131,B44
typical_cds_rare	Chr3	12886476	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	4	A8,B30,B48,C28
typical_cds_rare	Chr3	12886520	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	1	B123
typical_cds_rare	Chr3	12886550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017547	SmilChr03G001117	131017547	rna-XM_057946342.1	3	B81,B96,C70