source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	13099553	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	D10
lof_cds	Chr3	13099705	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	18	B135,B31,B35,B46,B50,B6,B60,B93,C10,C2,C21,C48,C58,C61,C64,C66,C67,C83
typical_cds_rare	Chr3	13099713	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	D10
lof_cds	Chr3	13099808	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	16	A5,B109,B37,B54,B62,B63,B7,B82,B83,B88,C3,C32,C34,C43,C77,C83
typical_cds_rare	Chr3	13099845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B122
typical_cds_rare	Chr3	13099847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B104,B60
typical_cds_rare	Chr3	13099848	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B57,C30
typical_cds_rare	Chr3	13099862	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C30
typical_cds_rare	Chr3	13099874	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B117,B85,C85
typical_cds_rare	Chr3	13099888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C53
typical_cds_rare	Chr3	13099900	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	A2,B41,C10,C74
lof_cds	Chr3	13099904	A	AAT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	20	A9,B109,B37,B62,B63,B7,B8,B82,B83,B88,B97,C3,C32,C34,C42,C43,C47,C60,C68,C77
typical_cds_rare	Chr3	13100000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B104,C64,C66
typical_cds_rare	Chr3	13100005	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	D10
typical_cds_rare	Chr3	13100007	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B104
lof_cds	Chr3	13100309	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	8	B109,B63,B77,B83,B88,B97,B99,C34
typical_cds_rare	Chr3	13100359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B137,B8,C42,C47,C53
typical_cds_rare	Chr3	13100362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	A9,C77,D10
typical_cds_rare	Chr3	13100373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B35
typical_cds_rare	Chr3	13100407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B63,B83,C32,C68
typical_cds_rare	Chr3	13100445	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B102,B131,B2,B74,C2
typical_cds_rare	Chr3	13100447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B133
typical_cds_rare	Chr3	13100455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	A2,B41,C10,C74
lof_cds	Chr3	13100533	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B102,B124,B136,B61
typical_cds_rare	Chr3	13100533	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B102,B124,B136,B61
typical_cds_rare	Chr3	13100554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C87
typical_cds_rare	Chr3	13100569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B22,B8,C42,C47,C60
lof_cds	Chr3	13100572	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B1,C80
typical_cds_rare	Chr3	13100572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B1,C80
typical_cds_rare	Chr3	13100597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B118,B127,B22,B54,B71
typical_cds_rare	Chr3	13101674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B19,B21,C62
typical_cds_rare	Chr3	13101734	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B100,B8,C42,C47,C60
lof_cds	Chr3	13101762	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	39	A11,B102,B103,B115,B119,B124,B126,B132,B136,B140,B3,B38,B39,B47,B53,B56,B61,B7,B76,B77,B81,B9,B96,B99,C1,C11,C14,C19,C22,C26,C33,C41,C44,C5,C55,C57,C63,C69,D7
typical_cds_rare	Chr3	13101778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	A9,B99
lof_cds	Chr3	13101791	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B19,B21,C62
typical_cds_rare	Chr3	13101791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B19,B21,C62
typical_cds_rare	Chr3	13102013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A9,B63,B83,C32,C68
typical_cds_rare	Chr3	13102015	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B75
lof_cds	Chr3	13102022	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	10	B37,B57,B77,B82,B83,C3,C32,C34,C77,C83
typical_cds_rare	Chr3	13102064	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B123,B75,B99
typical_cds_rare	Chr3	13102067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B123,B5,B57,B75
typical_cds_rare	Chr3	13102070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B99
typical_cds_rare	Chr3	13102092	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B36,B83,C59,D10
typical_cds_rare	Chr3	13102094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C30
typical_cds_rare	Chr3	13102095	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	A9,B22,B99
typical_cds_rare	Chr3	13102120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B22
typical_cds_rare	Chr3	13102129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B22
lof_cds	Chr3	13102147	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	C30,D11
typical_cds_rare	Chr3	13102147	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	C30,D11
typical_cds_rare	Chr3	13102226	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A1,A18,B123,B41,B55
typical_cds_rare	Chr3	13102260	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C39
typical_cds_rare	Chr3	13102274	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B19,B21,C62
typical_cds_rare	Chr3	13102306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B75
typical_cds_rare	Chr3	13102316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	A9
typical_cds_rare	Chr3	13102328	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A10,A16,B26,B48,D5
typical_cds_rare	Chr3	13102340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B75
typical_cds_rare	Chr3	13102400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B123,B75,B99,C30
typical_cds_rare	Chr3	13102421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	C15,C3,C52
lof_cds	Chr3	13102437	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	13	B109,B54,B57,B63,B8,B88,B97,C3,C42,C43,C47,C60,C77
typical_cds_rare	Chr3	13102458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B30
typical_cds_rare	Chr3	13102502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B8,C30,C42,C47,C60
lof_cds	Chr3	13102503	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B99
typical_cds_rare	Chr3	13102503	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B99
typical_cds_rare	Chr3	13102517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	C79
lof_cds	Chr3	13102632	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A5,B87,B98,C32,C68
typical_cds_rare	Chr3	13102632	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A5,B87,B98,C32,C68
lof_cds	Chr3	13102675	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	25	A4,B135,B28,B35,B46,B50,B6,B60,B64,B93,C10,C18,C19,C2,C21,C24,C42,C48,C58,C61,C64,C66,C67,C71,C83
typical_cds_rare	Chr3	13102678	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B99
lof_cds	Chr3	13102682	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B113,B32,B78,C45,C68
typical_cds_rare	Chr3	13102682	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	B113,B32,B78,C45,C68
typical_cds_rare	Chr3	13102692	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B123
typical_cds_rare	Chr3	13102709	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B99
typical_cds_rare	Chr3	13102723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B140
typical_cds_rare	Chr3	13102745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B8,C42,C47,C60
typical_cds_rare	Chr3	13102748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B75
typical_cds_rare	Chr3	13102776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	A2,B41,C10,C74
typical_cds_rare	Chr3	13102779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B22
lof_cds	Chr3	13102801	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	21	A5,B109,B123,B37,B54,B62,B75,B77,B8,B97,B99,C3,C32,C34,C42,C43,C47,C60,C68,C77,C83
typical_cds_rare	Chr3	13102823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B75
typical_cds_rare	Chr3	13102858	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	2	B123,B75
typical_cds_rare	Chr3	13102875	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	A11,A5,B78,B87
typical_cds_rare	Chr3	13102881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B1,B87,D8
typical_cds_rare	Chr3	13102882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	5	A18,B8,C42,C47,C60
typical_cds_rare	Chr3	13102895	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B75
typical_cds_rare	Chr3	13102921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	4	B8,C42,C47,C60
typical_cds_rare	Chr3	13102936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	3	B123,B75,B99
typical_cds_rare	Chr3	13102959	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017537	SmilChr03G001138	131017537	rna-XM_057946325.1	1	B22