source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	13172750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C65
typical_cds_rare	Chr3	13172769	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B21
typical_cds_rare	Chr3	13172779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B50,C79
typical_cds_rare	Chr3	13172803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B47
typical_cds_rare	Chr3	13172827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B112,B14,C68
typical_cds_rare	Chr3	13172832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B126,B67,C60
typical_cds_rare	Chr3	13172862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B105,B17,C54,C9
typical_cds_rare	Chr3	13172874	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B130,C50
typical_cds_rare	Chr3	13172889	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B85,B97,C22
typical_cds_rare	Chr3	13172891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B74
typical_cds_rare	Chr3	13172896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B28,B4,B72,C62,C9
lof_cds	Chr3	13172908	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	29	A15,A2,A3,B11,B115,B123,B129,B131,B132,B18,B25,B35,B4,B70,B73,B74,B94,B97,B99,C10,C21,C22,C47,C67,C78,C82,C85,C86,D8
lof_cds	Chr3	13172917	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	10	A3,B114,B135,B16,B37,B72,C38,C66,C78,D11
typical_cds_rare	Chr3	13172927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A9,B22,B4,B91
typical_cds_rare	Chr3	13172933	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B67
lof_cds	Chr3	13172950	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	6	B28,B4,B69,B72,C38,C62
typical_cds_rare	Chr3	13172964	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C8
lof_cds	Chr3	13172977	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A22,C33
typical_cds_rare	Chr3	13172977	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A22,C33
typical_cds_rare	Chr3	13172979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A23,B69
typical_cds_rare	Chr3	13173005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B44
typical_cds_rare	Chr3	13173036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B44,B54,B67,C6,C60
typical_cds_rare	Chr3	13173047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	C20,C6
typical_cds_rare	Chr3	13173053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B113,B20
lof_cds	Chr3	13173076	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B135,B35
typical_cds_rare	Chr3	13173076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B135,B35
typical_cds_rare	Chr3	13173092	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	A13,B136,B71,C75,C86
typical_cds_rare	Chr3	13173093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B18,C47,C85
typical_cds_rare	Chr3	13173110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B101,B131
typical_cds_rare	Chr3	13173116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B122,B20,C43
typical_cds_rare	Chr3	13173118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B139,B45,C10,C41
typical_cds_rare	Chr3	13173125	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B81,C11,C69,D11
typical_cds_rare	Chr3	13173133	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B36,B47,B6,B91,C56
typical_cds_rare	Chr3	13173136	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B73,C34
lof_cds	Chr3	13173139	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A3,B137,B75,C41
typical_cds_rare	Chr3	13173139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A3,B137,B75,C41
typical_cds_rare	Chr3	13173144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B32,B78
typical_cds_rare	Chr3	13173149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B122,B81
typical_cds_rare	Chr3	13173151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	C15,C66
typical_cds_rare	Chr3	13173154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B127
typical_cds_rare	Chr3	13173157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B114,C57
typical_cds_rare	Chr3	13173159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	C32,C68
typical_cds_rare	Chr3	13173164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	A3,B137,B53,C37,C41
typical_cds_rare	Chr3	13173172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B131,B24,C19,C67
typical_cds_rare	Chr3	13173174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B12,C10,C32,C68
typical_cds_rare	Chr3	13173178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B40,B46
typical_cds_rare	Chr3	13173199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B38,C39,C59
typical_cds_rare	Chr3	13173208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B62,C39,C47,C59,D2
typical_cds_rare	Chr3	13173216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C50
typical_cds_rare	Chr3	13173218	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B47,C15
typical_cds_rare	Chr3	13173220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B50,C78
typical_cds_rare	Chr3	13173225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B27,B48
lof_cds	Chr3	13173249	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	6	B49,B96,C25,C32,C63,D6
typical_cds_rare	Chr3	13173255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B78
typical_cds_rare	Chr3	13173267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B101,B105,B140,C67
typical_cds_rare	Chr3	13173283	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A13,B69,C68,C86
typical_cds_rare	Chr3	13173286	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B126,C40
typical_cds_rare	Chr3	13173299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B125,B129,B43,B45,D7
typical_cds_rare	Chr3	13173323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B105,B62,B99
typical_cds_rare	Chr3	13173331	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B78,D10
lof_cds	Chr3	13173346	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A25,C57
typical_cds_rare	Chr3	13173346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A25,C57
typical_cds_rare	Chr3	13173369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B134,B46,C44
typical_cds_rare	Chr3	13173374	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B24
typical_cds_rare	Chr3	13173405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B104,C20,C62
typical_cds_rare	Chr3	13173424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	A19,B131,B135,B33,C76
typical_cds_rare	Chr3	13173465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B101,B38,B79,C50,C55
lof_cds	Chr3	13173505	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	10	B117,B135,B40,B59,B70,B82,B99,C1,D3,D5
typical_cds_rare	Chr3	13173514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B34,B90
typical_cds_rare	Chr3	13173521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	C47,C86
typical_cds_rare	Chr3	13173535	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B54
lof_cds	Chr3	13173544	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	15	A1,A25,B10,B111,B133,B20,B30,B41,B44,B71,B91,C10,C62,C68,C74
typical_cds_rare	Chr3	13173550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	B22,B76,C57,C78
typical_cds_rare	Chr3	13173561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B81,D2
lof_cds	Chr3	13173562	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	A7,B135,B138,B67,C60
typical_cds_rare	Chr3	13173562	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	A7,B135,B138,B67,C60
typical_cds_rare	Chr3	13173568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C57
typical_cds_rare	Chr3	13173572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A3,B130,B134,B90
typical_cds_rare	Chr3	13173574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A19,C69
typical_cds_rare	Chr3	13173575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B125,B128,B69,C71,C87
typical_cds_rare	Chr3	13173592	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B15,B18,B5,B57,C66
typical_cds_rare	Chr3	13173612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	4	A7,A8,B118,B63
typical_cds_rare	Chr3	13173613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	5	B17,B52,B73,C54,C9
typical_cds_rare	Chr3	13173621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B1,B106,B136
typical_cds_rare	Chr3	13173632	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B11,D8
typical_cds_rare	Chr3	13173634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	A7,C71
lof_cds	Chr3	13173638	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C58
typical_cds_rare	Chr3	13173638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C58
typical_cds_rare	Chr3	13173672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B118
typical_cds_rare	Chr3	13173684	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C53
typical_cds_rare	Chr3	13173693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	B111
typical_cds_rare	Chr3	13173724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B11,B35,C58
typical_cds_rare	Chr3	13173799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B1,B140,B69
typical_cds_rare	Chr3	13173800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	2	B52,C9
lof_cds	Chr3	13173817	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	44	A19,A22,A24,A5,A7,B100,B112,B113,B121,B135,B19,B20,B28,B3,B34,B41,B47,B61,B64,B66,B73,B78,B83,C15,C20,C21,C24,C29,C3,C31,C36,C38,C47,C50,C51,C61,C64,C69,C78,C81,C9,D2,D5,D9
lof_cds	Chr3	13173820	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	64	A1,A10,A19,A5,A6,A9,B1,B100,B105,B109,B11,B12,B120,B125,B132,B133,B138,B140,B25,B29,B45,B46,B50,B53,B56,B58,B66,B67,B68,B69,B71,B74,B8,B9,B90,B93,B95,B97,C2,C20,C21,C26,C29,C36,C47,C5,C55,C56,C58,C59,C6,C64,C68,C70,C74,C80,C81,C82,C85,C86,D10,D6,D8,D9
lof_cds	Chr3	13173828	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	A21
typical_cds_rare	Chr3	13173828	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	A21
typical_cds_rare	Chr3	13173830	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B82,C12,D1
typical_cds_rare	Chr3	13173839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	3	B17,B43,C72
typical_cds_rare	Chr3	13173858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	C68
lof_cds	Chr3	13173865	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	A7
typical_cds_rare	Chr3	13173865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018367	SmilChr03G001142	131018367	rna-XM_057947096.1	1	A7