source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	13557667	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B64,C24
typical_cds_rare	Chr3	13557667	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B64,C24
lof_cds	Chr3	13557668	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	38	B101,B103,B11,B117,B124,B13,B136,B15,B3,B30,B33,B34,B47,B56,B57,B7,B72,B73,B81,B96,B99,C1,C19,C22,C26,C30,C31,C44,C49,C5,C55,C63,C69,C72,C75,C86,C87,D10
typical_cds_rare	Chr3	13557787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B111
lof_cds	Chr3	13557812	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	8	B136,B50,B73,B89,C49,C58,C71,D8
typical_cds_rare	Chr3	13557872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	C17,C9
typical_cds_rare	Chr3	13557873	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B36
typical_cds_rare	Chr3	13557885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B132,B46,C60,D11
lof_cds	Chr3	13557901	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C55
typical_cds_rare	Chr3	13557901	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C55
typical_cds_rare	Chr3	13557904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A22,C31,C34,C63,C67
lof_cds	Chr3	13557915	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	18	A9,B114,B119,B135,B23,B46,B50,B6,B77,B89,C30,C49,C58,C60,C69,C71,D11,D3
lof_cds	Chr3	13557916	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	41	A10,A20,B101,B103,B104,B105,B107,B108,B122,B130,B18,B19,B20,B25,B29,B34,B35,B4,B45,B61,B65,B72,B86,B88,B96,B98,C12,C23,C27,C29,C39,C4,C41,C45,C48,C62,C65,C76,C78,C80,D7
typical_cds_rare	Chr3	13557931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	C55,C71
typical_cds_rare	Chr3	13557932	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B22,B54,C39
typical_cds_rare	Chr3	13557934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B102,B56
typical_cds_rare	Chr3	13557953	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B102,B56,C77
lof_cds	Chr3	13557983	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	117	A11,A14,A20,A21,A22,A25,A6,B101,B102,B104,B106,B107,B108,B111,B114,B115,B119,B120,B122,B125,B128,B129,B13,B130,B131,B136,B137,B140,B18,B2,B22,B24,B25,B26,B27,B28,B3,B33,B35,B36,B38,B39,B4,B42,B45,B47,B51,B52,B53,B54,B56,B58,B59,B6,B64,B65,B66,B67,B69,B73,B74,B76,B77,B81,B84,B89,B9,B91,B96,B97,B99,C1,C12,C14,C16,C17,C19,C2,C22,C23,C25,C26,C27,C30,C37,C38,C39,C4,C40,C41,C43,C44,C48,C49,C5,C50,C52,C55,C56,C57,C59,C6,C60,C62,C66,C69,C7,C71,C72,C73,C74,C8,C82,D11,D3,D7,D8
lof_cds	Chr3	13557987	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	112	A11,A14,A20,A21,A22,A25,A6,B101,B102,B104,B106,B107,B108,B111,B114,B115,B119,B120,B122,B125,B128,B129,B13,B130,B131,B136,B137,B140,B18,B2,B24,B25,B26,B27,B28,B3,B33,B35,B36,B38,B39,B4,B42,B45,B51,B52,B53,B56,B58,B59,B6,B64,B65,B66,B67,B69,B73,B74,B76,B77,B81,B84,B89,B9,B91,B96,B99,C1,C12,C14,C16,C17,C19,C2,C22,C23,C25,C26,C27,C30,C33,C37,C38,C4,C40,C41,C44,C48,C49,C5,C50,C52,C55,C56,C57,C59,C6,C60,C62,C66,C69,C7,C71,C72,C73,C74,C8,C82,D11,D3,D7,D8
lof_cds	Chr3	13557988	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	8	A15,B12,B123,B17,B21,B85,C58,D2
lof_cds	Chr3	13557991	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	47	A15,A2,B10,B101,B114,B12,B123,B126,B128,B133,B134,B137,B140,B15,B17,B20,B21,B22,B34,B37,B41,B48,B54,B64,B76,B81,B85,B86,B98,C10,C17,C39,C42,C45,C5,C58,C61,C78,C8,C80,C81,C82,D10,D2,D4,D5,D9
typical_cds_rare	Chr3	13558001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B102,B134,B2,C2,C60
typical_cds_rare	Chr3	13558046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B22,B92,D10
typical_cds_rare	Chr3	13558063	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C77
lof_cds	Chr3	13558064	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	134	A1,A11,A13,A14,A20,A22,A25,A6,A9,B1,B101,B102,B104,B105,B106,B107,B108,B111,B113,B114,B117,B119,B120,B121,B122,B125,B126,B128,B131,B136,B137,B139,B140,B17,B18,B2,B22,B25,B26,B3,B33,B35,B36,B38,B39,B4,B42,B44,B45,B52,B53,B54,B56,B58,B59,B6,B61,B64,B65,B66,B69,B7,B70,B73,B74,B76,B77,B8,B81,B82,B84,B86,B89,B9,B94,B97,B99,C1,C11,C12,C13,C14,C16,C17,C2,C22,C23,C25,C26,C27,C29,C30,C33,C34,C37,C38,C39,C4,C41,C43,C45,C46,C48,C49,C5,C50,C52,C53,C56,C57,C58,C59,C6,C60,C62,C63,C65,C66,C67,C69,C7,C71,C72,C73,C74,C76,C80,C82,C85,C86,D11,D3,D7,D8
lof_cds	Chr3	13558065	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	94	A10,A11,A13,A14,A22,A25,B101,B102,B104,B105,B106,B107,B108,B111,B113,B114,B119,B121,B122,B136,B137,B139,B140,B2,B26,B3,B33,B35,B36,B38,B39,B4,B42,B44,B45,B52,B53,B56,B58,B59,B6,B61,B69,B73,B74,B76,B77,B81,B84,B86,B89,B9,B94,B99,C1,C11,C13,C14,C16,C2,C22,C23,C26,C29,C33,C37,C38,C39,C4,C45,C48,C49,C5,C50,C53,C56,C57,C58,C6,C60,C62,C63,C65,C66,C67,C69,C7,C72,C73,C80,C82,D11,D7,D8
lof_cds	Chr3	13558067	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	134	A1,A10,A11,A13,A14,A20,A22,A25,A6,A9,B1,B101,B102,B103,B104,B105,B106,B107,B108,B111,B113,B114,B117,B119,B120,B121,B122,B125,B126,B128,B131,B136,B137,B139,B140,B17,B18,B2,B22,B25,B26,B3,B33,B35,B36,B38,B39,B4,B42,B44,B45,B52,B53,B54,B56,B58,B59,B6,B61,B64,B65,B69,B7,B70,B73,B74,B76,B77,B8,B81,B82,B84,B86,B89,B9,B94,B97,B99,C1,C11,C12,C13,C14,C16,C17,C2,C22,C23,C25,C26,C27,C29,C30,C33,C37,C38,C39,C4,C41,C43,C45,C46,C48,C49,C5,C50,C52,C53,C56,C57,C58,C59,C6,C60,C62,C63,C65,C66,C67,C69,C7,C71,C72,C73,C74,C76,C80,C82,C85,C86,D11,D3,D7,D8
typical_cds_rare	Chr3	13558076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B65,C28,D2
lof_cds	Chr3	13558084	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	58	A1,A10,A15,A16,A18,A20,A23,A24,A6,A8,B110,B114,B12,B120,B125,B13,B131,B17,B18,B19,B21,B25,B31,B35,B52,B58,B65,B66,B69,B73,B84,B91,B97,C1,C13,C17,C24,C27,C28,C37,C40,C46,C48,C5,C52,C59,C62,C64,C65,C7,C70,C73,C74,C76,C78,C86,D2,D3
typical_cds_rare	Chr3	13558093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B108,B98
typical_cds_rare	Chr3	13558101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B74,C14
lof_cds	Chr3	13558147	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	140	A11,A13,A18,A21,A4,A5,A7,A8,A9,B1,B101,B102,B103,B106,B108,B110,B114,B115,B119,B12,B123,B124,B125,B126,B13,B132,B133,B135,B136,B137,B139,B14,B140,B15,B17,B2,B22,B25,B26,B29,B3,B30,B31,B32,B33,B35,B38,B39,B40,B42,B47,B48,B5,B50,B52,B53,B55,B58,B60,B61,B65,B67,B68,B7,B70,B74,B76,B77,B8,B81,B82,B84,B85,B87,B88,B89,B9,B91,B92,B93,B94,B96,B97,B99,C1,C11,C12,C14,C17,C18,C19,C2,C20,C21,C22,C26,C28,C29,C3,C30,C31,C32,C33,C36,C37,C38,C39,C41,C42,C44,C45,C48,C49,C5,C51,C52,C55,C56,C57,C60,C61,C62,C63,C65,C67,C68,C69,C7,C70,C71,C77,C82,C83,C87,D10,D11,D6,D7,D8,D9
typical_cds_rare	Chr3	13558150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C78
lof_cds	Chr3	13558211	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	24	A2,A8,B10,B114,B12,B128,B133,B25,B41,B52,B55,B62,B66,B83,B88,B90,B97,C28,C32,C37,C68,C81,C87,D10
lof_cds	Chr3	13558231	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C57
typical_cds_rare	Chr3	13558231	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C57
typical_cds_rare	Chr3	13558243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B93
typical_cds_rare	Chr3	13558299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B2,B74,C14,C2,C30
lof_cds	Chr3	13558336	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	8	B127,B128,B37,B63,B95,C1,C54,C79
lof_cds	Chr3	13558343	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A1,B51,B58,C17,C87
typical_cds_rare	Chr3	13558343	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A1,B51,B58,C17,C87
typical_cds_rare	Chr3	13558346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B102,B2,B74,C2
typical_cds_rare	Chr3	13558349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B11,B14,B15,B22
typical_cds_rare	Chr3	13558373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B1,B68,B78,C77,D11
typical_cds_rare	Chr3	13558382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B140
lof_cds	Chr3	13558395	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C71
typical_cds_rare	Chr3	13558395	A	ATG	INDEL	2bp_insertion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C71
typical_cds_rare	Chr3	13558402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B140
typical_cds_rare	Chr3	13558414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B22
lof_cds	Chr3	13558426	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	78	A14,A15,A16,A20,A21,A7,A8,B100,B101,B108,B11,B110,B111,B119,B12,B120,B122,B133,B137,B138,B17,B21,B23,B24,B25,B27,B31,B33,B38,B4,B40,B41,B43,B45,B46,B58,B6,B62,B66,B67,B78,B82,B84,B85,B89,B90,B91,B92,B94,B96,B97,C15,C16,C25,C27,C28,C3,C31,C34,C35,C38,C4,C41,C42,C43,C44,C52,C6,C61,C7,C71,C73,C75,C76,C78,C82,D3,D7
lof_cds	Chr3	13558434	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	74	A14,A15,A16,A20,A21,A7,A8,B100,B101,B108,B110,B119,B12,B120,B122,B133,B137,B138,B17,B21,B23,B24,B25,B27,B31,B33,B38,B4,B40,B41,B43,B45,B46,B58,B6,B62,B66,B67,B78,B82,B84,B85,B89,B90,B91,B92,B94,B96,B97,C15,C16,C25,C27,C28,C3,C31,C34,C35,C4,C41,C42,C43,C44,C52,C6,C7,C71,C73,C75,C76,C78,C82,D3,D7
lof_cds	Chr3	13558437	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	71	A14,A15,A16,A20,A21,A7,A8,B100,B101,B108,B11,B110,B111,B119,B120,B122,B133,B137,B138,B17,B21,B23,B24,B25,B27,B31,B33,B38,B4,B40,B41,B43,B45,B58,B62,B66,B67,B78,B82,B84,B85,B89,B90,B91,B92,B94,B96,B97,C16,C25,C27,C28,C3,C31,C34,C35,C4,C41,C42,C43,C52,C6,C7,C71,C73,C75,C76,C78,C82,D3,D7
lof_cds	Chr3	13558448	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	66	A14,A15,A16,A20,A21,A7,A8,B101,B108,B11,B110,B12,B120,B122,B133,B138,B17,B21,B23,B24,B25,B31,B33,B38,B4,B40,B41,B43,B45,B58,B62,B66,B67,B78,B82,B84,B85,B89,B90,B91,B92,B94,B96,B97,C15,C16,C25,C27,C28,C3,C31,C34,C35,C38,C4,C41,C42,C43,C52,C6,C7,C71,C73,C75,C76,C82
lof_cds	Chr3	13558459	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	113	A10,A14,A15,A16,A20,A21,A22,A23,A24,A25,A7,A8,B1,B101,B104,B107,B108,B109,B11,B110,B111,B115,B117,B12,B120,B122,B133,B137,B138,B140,B17,B18,B21,B22,B23,B24,B25,B31,B33,B38,B4,B40,B41,B42,B43,B45,B51,B54,B55,B57,B58,B6,B62,B65,B66,B67,B68,B78,B79,B81,B82,B84,B85,B88,B89,B9,B90,B91,B92,B93,B94,B96,B97,C12,C15,C16,C20,C25,C27,C28,C3,C31,C34,C35,C38,C4,C41,C42,C43,C46,C52,C55,C59,C6,C61,C62,C7,C71,C73,C75,C76,C77,C78,C81,C82,C85,C9,D11,D2,D3,D6,D7,D8
typical_cds_rare	Chr3	13558465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B102,B2,B74,C2,D10
typical_cds_rare	Chr3	13558468	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B1,C24,C55,C71,D8
lof_cds	Chr3	13558478	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	6	B100,B110,B119,B27,B97,C76
typical_cds_rare	Chr3	13558500	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	A5,C37,C74,C79
typical_cds_rare	Chr3	13558511	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B113,B47,B87,C49
typical_cds_rare	Chr3	13558573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B135,B50,C21
typical_cds_rare	Chr3	13558631	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B99
typical_cds_rare	Chr3	13558638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B73,B84,B95,C43
typical_cds_rare	Chr3	13558694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C30
typical_cds_rare	Chr3	13558719	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C8
lof_cds	Chr3	13558731	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	8	B102,B126,B132,B38,C1,C26,C5,D7
lof_cds	Chr3	13558736	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	10	B102,B126,B132,B136,B38,C1,C26,C41,C5,D7
typical_cds_rare	Chr3	13558773	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B130,C47
typical_cds_rare	Chr3	13558808	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B20,B72,C36,C65
lof_cds	Chr3	13558822	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B48,C65,D11
typical_cds_rare	Chr3	13558822	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B48,C65,D11
typical_cds_rare	Chr3	13558833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B20,B53,B72,C70,D5
typical_cds_rare	Chr3	13558839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	A7,B111,C82
typical_cds_rare	Chr3	13558902	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B140
typical_cds_rare	Chr3	13558954	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B37,C77,C83
lof_cds	Chr3	13558979	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	80	A1,A14,A15,A19,A20,A4,A5,A7,B1,B108,B111,B120,B125,B126,B131,B137,B138,B15,B17,B22,B23,B24,B37,B39,B4,B41,B42,B45,B54,B57,B58,B59,B6,B62,B65,B66,B67,B68,B75,B78,B8,B80,B84,B89,B90,B91,B96,C15,C16,C17,C2,C24,C25,C27,C3,C31,C35,C38,C39,C40,C41,C42,C46,C47,C52,C53,C59,C6,C60,C61,C62,C7,C74,C75,C77,C86,D2,D6,D7,D9
lof_cds	Chr3	13558985	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	79	A1,A14,A15,A19,A20,A4,A5,A7,B1,B108,B111,B120,B125,B126,B131,B137,B138,B15,B17,B22,B23,B24,B37,B39,B4,B41,B42,B45,B54,B57,B58,B59,B6,B62,B65,B66,B67,B68,B75,B78,B8,B80,B84,B89,B90,B91,B96,C15,C16,C17,C2,C24,C25,C27,C3,C31,C35,C38,C39,C40,C41,C42,C46,C47,C52,C53,C59,C6,C60,C61,C62,C7,C74,C75,C77,C86,D2,D6,D7
lof_cds	Chr3	13558988	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	82	A1,A14,A15,A19,A20,A4,A7,B108,B111,B120,B125,B126,B131,B137,B138,B15,B17,B22,B23,B24,B35,B37,B39,B4,B41,B42,B45,B46,B54,B57,B58,B59,B6,B60,B62,B65,B66,B67,B68,B75,B78,B8,B80,B84,B89,B91,B96,C15,C16,C17,C19,C2,C24,C25,C27,C3,C31,C35,C38,C39,C40,C41,C42,C46,C47,C48,C52,C53,C59,C6,C61,C62,C64,C66,C7,C74,C77,C83,C86,D2,D6,D7
typical_cds_rare	Chr3	13559091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B57,B97,C43,C83
typical_cds_rare	Chr3	13559097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B8,C60
typical_cds_rare	Chr3	13559104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B111
typical_cds_rare	Chr3	13559113	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B101
typical_cds_rare	Chr3	13559115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C13
typical_cds_rare	Chr3	13559132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B14,B27,B58,C87
lof_cds	Chr3	13559146	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B101,B91
typical_cds_rare	Chr3	13559146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B101,B91
typical_cds_rare	Chr3	13559170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	A11,B1,B11,C87
lof_cds	Chr3	13559174	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B13,B73,C86
typical_cds_rare	Chr3	13559174	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B13,B73,C86
typical_cds_rare	Chr3	13559240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	A11
typical_cds_rare	Chr3	13559266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B123,B99,D10
typical_cds_rare	Chr3	13559285	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B36,C33,C80,D11
lof_cds	Chr3	13559314	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	35	A1,A14,B104,B113,B115,B120,B122,B129,B13,B134,B137,B24,B27,B30,B45,B58,B59,B60,B69,B73,B79,B81,B87,B93,B94,C47,C55,C57,C7,C72,C73,C74,C86,D8,D9
typical_cds_rare	Chr3	13559322	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B122,B30,B4,C77
typical_cds_rare	Chr3	13559335	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	C34,C63
lof_cds	Chr3	13559355	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B42
typical_cds_rare	Chr3	13559355	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B42
typical_cds_rare	Chr3	13559414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C30
typical_cds_rare	Chr3	13559424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	B28,B64,B99,C42,C71
typical_cds_rare	Chr3	13559428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B92,C18
typical_cds_rare	Chr3	13559447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C30
typical_cds_rare	Chr3	13559449	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B137,B2,C15,D9
typical_cds_rare	Chr3	13559451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C79
lof_cds	Chr3	13559454	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	65	A15,A18,A20,A21,A23,A6,A7,B104,B109,B114,B12,B120,B122,B126,B13,B18,B24,B25,B36,B37,B40,B42,B43,B44,B45,B46,B49,B5,B54,B56,B57,B58,B65,B67,B68,B80,B93,B94,B96,C12,C16,C20,C25,C26,C27,C3,C35,C44,C47,C53,C58,C59,C62,C64,C7,C70,C74,C76,C81,C82,C84,C86,D11,D2,D3
typical_cds_rare	Chr3	13559485	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	3	B2,B25,B74
lof_cds	Chr3	13559507	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	88	A10,A11,A13,A14,A18,A19,A2,A22,A3,A8,A9,B1,B101,B103,B105,B11,B110,B111,B113,B117,B121,B122,B123,B132,B138,B14,B15,B17,B23,B29,B30,B31,B32,B33,B34,B37,B41,B42,B43,B44,B46,B48,B49,B53,B54,B59,B61,B62,B64,B78,B79,B82,B85,B87,B89,B98,C10,C13,C15,C16,C20,C21,C23,C28,C3,C30,C31,C32,C33,C37,C39,C40,C45,C51,C52,C54,C6,C61,C65,C67,C69,C77,C79,C85,C87,C9,D10,D5
typical_cds_rare	Chr3	13559566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	C50,C61
typical_cds_rare	Chr3	13559568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C77
lof_cds	Chr3	13559605	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	14	B102,B115,B132,B136,B3,B77,B9,B96,B99,C22,C33,C56,C57,C69
typical_cds_rare	Chr3	13559609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B2,B25
typical_cds_rare	Chr3	13559633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A25,B21,B83,B94,C29
typical_cds_rare	Chr3	13559641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	A4,C55
typical_cds_rare	Chr3	13559688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B16,B32
typical_cds_rare	Chr3	13559697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B16,B32
typical_cds_rare	Chr3	13559770	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B123,B35,B46,D8
typical_cds_rare	Chr3	13560021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B10
typical_cds_rare	Chr3	13560025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B10
lof_cds	Chr3	13560049	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A7,B103,B17,B20,C23
typical_cds_rare	Chr3	13560049	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	5	A7,B103,B17,B20,C23
typical_cds_rare	Chr3	13560114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B22
typical_cds_rare	Chr3	13560164	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	2	B22,B66
typical_cds_rare	Chr3	13560245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	B22
typical_cds_rare	Chr3	13560250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	4	B22,B66,C24,C73
typical_cds_rare	Chr3	13560268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C55
typical_cds_rare	Chr3	13560358	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C59
typical_cds_rare	Chr3	13560400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C73
typical_cds_rare	Chr3	13560440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C55
typical_cds_rare	Chr3	13560445	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017497	SmilChr03G001181	131017497	rna-XM_057946252.1	1	C55