source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	15226210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15226329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15226360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15226425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15226524	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B136,B52,C72
typical_cds_rare	Chr3	15226537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B125,B54,B86,C73
typical_cds_rare	Chr3	15226543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15226643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C71
lof_cds	Chr3	15226651	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C71
typical_cds_rare	Chr3	15226651	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C71
typical_cds_rare	Chr3	15226678	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B140,C56
typical_cds_rare	Chr3	15226701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	A18,B136,B52,C72
typical_cds_rare	Chr3	15226714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C37
typical_cds_rare	Chr3	15226762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B125,B54,B86,C73
typical_cds_rare	Chr3	15226799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B131,B72,B73,C56,C86
typical_cds_rare	Chr3	15226811	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B98
typical_cds_rare	Chr3	15226857	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B105,C32,C68
lof_cds	Chr3	15226947	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B136,B52,C72
typical_cds_rare	Chr3	15226947	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B136,B52,C72
lof_cds	Chr3	15226949	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
typical_cds_rare	Chr3	15226949	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
lof_cds	Chr3	15226950	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
typical_cds_rare	Chr3	15226950	CTG	C	INDEL	2bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
lof_cds	Chr3	15226958	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
typical_cds_rare	Chr3	15226958	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B87,C26
typical_cds_rare	Chr3	15226976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A20,B134,B25,B47,D8
typical_cds_rare	Chr3	15226999	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B19,D4
typical_cds_rare	Chr3	15227032	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B14
lof_cds	Chr3	15227046	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B128,C26,D3
typical_cds_rare	Chr3	15227046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B128,C26,D3
lof_cds	Chr3	15227047	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	7	A15,B128,B134,C26,C6,C63,D3
typical_cds_rare	Chr3	15227057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B121,B25,D1
lof_cds	Chr3	15227085	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B19,B22,B31,B89,C45
typical_cds_rare	Chr3	15227085	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B19,B22,B31,B89,C45
typical_cds_rare	Chr3	15227106	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B106,B109
typical_cds_rare	Chr3	15227114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	A16,B19,C57,C82
typical_cds_rare	Chr3	15227123	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B19,B22,B31,B89,C45
lof_cds	Chr3	15227136	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227136	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
lof_cds	Chr3	15227139	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227139	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B37
typical_cds_rare	Chr3	15227144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B121,B129
typical_cds_rare	Chr3	15227170	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B120,B65,B68,B91,C75
typical_cds_rare	Chr3	15227174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B78
lof_cds	Chr3	15227187	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	17	A15,B1,B101,B107,B113,B127,B128,B91,B97,B98,C26,C27,C6,C63,C69,C74,C83
lof_cds	Chr3	15227190	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	27	A1,A19,A21,A25,A5,A6,B104,B108,B121,B126,B20,B3,B46,B5,B70,B81,B86,B95,B97,C10,C15,C3,C49,C58,C60,D3,D8
lof_cds	Chr3	15227194	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	45	A1,A15,A19,A21,A25,A6,B1,B101,B104,B107,B108,B113,B120,B121,B126,B127,B128,B20,B3,B46,B5,B68,B70,B81,B86,B91,B95,B97,B98,C10,C15,C26,C27,C3,C49,C58,C6,C60,C63,C69,C74,C75,C83,D3,D8
typical_cds_rare	Chr3	15227197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B120,B68,B91,C75
typical_cds_rare	Chr3	15227237	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B30,B52,C37,D6
lof_cds	Chr3	15227238	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A3,B45,B89,C10,C48
typical_cds_rare	Chr3	15227238	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A3,B45,B89,C10,C48
typical_cds_rare	Chr3	15227272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B120,B91
lof_cds	Chr3	15227285	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B120
typical_cds_rare	Chr3	15227285	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B120
typical_cds_rare	Chr3	15227286	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	A9,B35,C82
lof_cds	Chr3	15227289	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	36	A24,B1,B110,B114,B115,B120,B126,B132,B137,B25,B29,B30,B34,B35,B4,B46,B63,B65,B72,B77,B79,B99,C10,C2,C26,C28,C30,C31,C40,C41,C47,C55,C56,C60,C80,C85
lof_cds	Chr3	15227291	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	35	A24,B1,B114,B115,B120,B126,B132,B137,B25,B29,B30,B34,B35,B4,B46,B63,B65,B72,B77,B79,B99,C10,C2,C26,C28,C30,C31,C40,C41,C47,C55,C56,C60,C80,C85
lof_cds	Chr3	15227319	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A19,B71,C40,C55,C57
typical_cds_rare	Chr3	15227319	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A19,B71,C40,C55,C57
typical_cds_rare	Chr3	15227333	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	A19,B71,C40,C57
lof_cds	Chr3	15227336	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	7	A19,B64,B73,B84,C25,C80,C84
typical_cds_rare	Chr3	15227339	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B127,B98,C60,C83
typical_cds_rare	Chr3	15227356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B120,B72,C21,C70
typical_cds_rare	Chr3	15227357	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
lof_cds	Chr3	15227375	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A3,B45,B89,C10,C72
typical_cds_rare	Chr3	15227375	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A3,B45,B89,C10,C72
typical_cds_rare	Chr3	15227376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B101,B118,B25
typical_cds_rare	Chr3	15227382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B32,B33,B54,C1,C28
typical_cds_rare	Chr3	15227387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	A3,B45,B89,C10,C72
lof_cds	Chr3	15227397	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	10	A15,A19,B110,B130,B33,B71,B78,B86,B97,C57
typical_cds_rare	Chr3	15227413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B21
typical_cds_rare	Chr3	15227421	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C16
lof_cds	Chr3	15227452	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	151	A1,A11,A15,A16,A19,A2,A23,A24,A25,A4,A6,B1,B10,B101,B104,B105,B106,B109,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B124,B126,B128,B129,B130,B132,B133,B134,B135,B137,B14,B140,B15,B16,B17,B18,B19,B2,B21,B22,B25,B26,B27,B28,B30,B31,B32,B33,B35,B37,B4,B46,B5,B52,B53,B54,B55,B56,B57,B59,B60,B61,B63,B67,B68,B69,B70,B71,B72,B73,B74,B78,B79,B8,B80,B82,B83,B84,B86,B87,B9,B91,B96,B97,B98,B99,C10,C14,C16,C18,C19,C2,C21,C22,C23,C24,C26,C27,C28,C29,C30,C31,C34,C35,C36,C37,C39,C4,C40,C41,C42,C44,C46,C47,C48,C53,C54,C55,C56,C59,C60,C64,C65,C66,C7,C72,C77,C78,C79,C8,C81,C82,C85,C86,C87,C9,D1,D11,D4,D6,D8
lof_cds	Chr3	15227460	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	11	B1,B101,B111,B118,B123,B135,B25,C31,C39,C40,C85
lof_cds	Chr3	15227465	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	155	A1,A11,A15,A16,A18,A19,A2,A23,A24,A25,A3,A4,A6,B1,B10,B101,B104,B105,B106,B109,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B124,B126,B128,B129,B130,B132,B133,B134,B135,B137,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B25,B26,B27,B28,B30,B31,B32,B33,B35,B37,B4,B46,B5,B52,B53,B54,B55,B56,B57,B59,B60,B61,B63,B67,B68,B69,B7,B70,B71,B72,B73,B74,B78,B79,B8,B80,B82,B83,B84,B86,B87,B9,B91,B96,B97,B98,B99,C10,C14,C16,C18,C19,C2,C21,C22,C23,C24,C26,C27,C28,C29,C30,C31,C34,C35,C36,C37,C39,C4,C40,C41,C42,C44,C46,C47,C48,C53,C54,C55,C56,C59,C60,C64,C65,C66,C7,C72,C77,C78,C79,C8,C81,C82,C85,C86,C87,C9,D1,D11,D4,D6,D8
lof_cds	Chr3	15227472	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B26,B4,B61
typical_cds_rare	Chr3	15227472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B26,B4,B61
lof_cds	Chr3	15227473	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	44	A11,A16,A25,A6,B10,B101,B111,B115,B117,B132,B135,B137,B14,B15,B17,B19,B20,B28,B35,B56,B57,B70,B72,B79,B8,B9,C10,C14,C16,C18,C19,C26,C28,C39,C4,C41,C44,C46,C47,C65,C72,C8,D1,D8
typical_cds_rare	Chr3	15227495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B117,B70,C28,C65
typical_cds_rare	Chr3	15227504	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	A10,C43,C78
lof_cds	Chr3	15227507	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B41,B44
typical_cds_rare	Chr3	15227507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B41,B44
lof_cds	Chr3	15227514	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	20	A1,A7,B100,B113,B114,B120,B129,B6,B69,B90,B94,C20,C21,C47,C7,C70,C73,C8,C87,D2
lof_cds	Chr3	15227516	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	167	A1,A11,A15,A16,A18,A19,A2,A22,A23,A24,A25,A3,A4,A5,A6,A7,B1,B10,B100,B101,B104,B105,B106,B109,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B126,B128,B129,B13,B130,B131,B133,B134,B135,B137,B139,B15,B16,B17,B18,B19,B2,B20,B22,B25,B26,B27,B28,B30,B31,B32,B33,B34,B35,B4,B44,B45,B46,B5,B52,B53,B54,B55,B56,B57,B59,B6,B60,B61,B62,B63,B64,B67,B68,B69,B7,B70,B71,B72,B74,B78,B79,B8,B82,B83,B85,B86,B87,B88,B9,B90,B91,B94,B96,B97,B98,B99,C10,C12,C14,C16,C18,C2,C20,C21,C22,C23,C24,C26,C27,C28,C29,C30,C31,C34,C35,C36,C4,C40,C41,C42,C44,C46,C47,C48,C53,C54,C55,C56,C59,C60,C61,C64,C65,C66,C68,C7,C70,C72,C73,C77,C78,C79,C8,C81,C82,C85,C86,C87,C9,D1,D11,D2,D4,D6,D8
lof_cds	Chr3	15227521	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	156	A1,A11,A15,A16,A18,A19,A2,A22,A23,A24,A25,A3,A4,A5,A6,B1,B10,B101,B104,B105,B106,B109,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B126,B128,B129,B13,B130,B131,B133,B134,B135,B137,B139,B15,B16,B17,B18,B19,B2,B20,B22,B25,B26,B27,B28,B30,B31,B32,B33,B34,B35,B4,B44,B45,B46,B5,B52,B53,B54,B55,B56,B57,B59,B60,B61,B62,B63,B64,B67,B68,B69,B7,B70,B71,B72,B74,B78,B79,B8,B82,B83,B85,B86,B87,B9,B91,B96,B97,B98,B99,C10,C12,C14,C16,C18,C2,C21,C22,C23,C24,C26,C27,C28,C29,C30,C31,C34,C35,C36,C4,C40,C41,C42,C44,C46,C47,C48,C50,C53,C54,C55,C56,C59,C60,C64,C65,C66,C68,C7,C72,C77,C78,C79,C81,C82,C85,C86,C87,C9,D1,D11,D4,D6,D8
typical_cds_rare	Chr3	15227543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C9
typical_cds_rare	Chr3	15227545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B101,B16,B33,B74,C24
typical_cds_rare	Chr3	15227551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C56
typical_cds_rare	Chr3	15227555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B9
lof_cds	Chr3	15227565	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C9
typical_cds_rare	Chr3	15227565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C9
typical_cds_rare	Chr3	15227575	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B131,B73,C56
lof_cds	Chr3	15227583	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B30
typical_cds_rare	Chr3	15227583	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B30
lof_cds	Chr3	15227604	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	A15,A7,B127
typical_cds_rare	Chr3	15227604	C	CGG	INDEL	2bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	A15,A7,B127
typical_cds_rare	Chr3	15227628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B122,C60,C66
typical_cds_rare	Chr3	15227644	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	B52,C37,D6
typical_cds_rare	Chr3	15227729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	C54
lof_cds	Chr3	15227732	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	14	A24,A7,B100,B105,B112,B42,B55,B67,C22,C52,C58,C71,C78,D5
typical_cds_rare	Chr3	15227781	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B9
typical_cds_rare	Chr3	15227784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B55,C58,C78,D5
typical_cds_rare	Chr3	15227795	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B31,B71,C16,C61
lof_cds	Chr3	15227823	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	8	B101,B31,B71,C16,C18,C2,C32,C61
lof_cds	Chr3	15227827	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	8	B101,B31,B71,C16,C18,C2,C32,C61
lof_cds	Chr3	15227828	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	25	A5,B105,B124,B137,B138,B139,B140,B17,B27,B57,B62,B64,B74,C1,C12,C18,C21,C27,C29,C45,C48,C53,C55,C66,C87
lof_cds	Chr3	15227875	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	14	A22,B101,B127,B2,B27,B30,B77,C18,C2,C27,C49,C54,C79,D1
lof_cds	Chr3	15227880	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	11	B127,B2,B27,B30,C18,C2,C27,C49,C54,C79,D1
lof_cds	Chr3	15227906	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	11	B113,B114,B134,B31,B71,C16,C29,C57,C61,C64,C80
lof_cds	Chr3	15227999	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	C52,C78,C82
typical_cds_rare	Chr3	15227999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	3	C52,C78,C82
typical_cds_rare	Chr3	15228034	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	5	B14,B27,B47,C18,C29
lof_cds	Chr3	15228037	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	6	A19,B64,B73,B84,C80,C84
lof_cds	Chr3	15228110	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	6	A7,B6,C10,C20,C39,D3
lof_cds	Chr3	15228180	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	D8
typical_cds_rare	Chr3	15228180	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	D8
lof_cds	Chr3	15228237	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	27	A16,A25,A8,B1,B102,B106,B117,B127,B13,B15,B48,B6,B60,B63,B78,B81,B94,B99,C10,C15,C16,C26,C34,C51,C79,C87,D8
typical_cds_rare	Chr3	15228245	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B5,B57
typical_cds_rare	Chr3	15228254	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B9
lof_cds	Chr3	15228278	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	24	A16,A25,A8,B1,B102,B106,B127,B13,B15,B48,B6,B60,B63,B78,B81,B94,B99,C15,C26,C34,C51,C79,C87,D8
lof_cds	Chr3	15228282	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	22	A16,A25,A8,B1,B102,B106,B127,B13,B15,B48,B6,B60,B63,B78,B81,B94,C15,C26,C51,C79,C87,D8
lof_cds	Chr3	15228288	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	22	A16,A25,A8,B1,B102,B106,B127,B13,B15,B48,B6,B60,B63,B78,B81,B94,C15,C26,C51,C79,C87,D8
lof_cds	Chr3	15228291	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	21	A16,A25,A8,B1,B102,B106,B127,B13,B48,B6,B60,B63,B78,B81,B94,C15,C26,C51,C79,C87,D8
lof_cds	Chr3	15228327	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B106,B127,B81,C26
typical_cds_rare	Chr3	15228327	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B106,B127,B81,C26
lof_cds	Chr3	15228329	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B106,B127,B81,C26
typical_cds_rare	Chr3	15228329	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	4	B106,B127,B81,C26
typical_cds_rare	Chr3	15228334	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	1	B65
typical_cds_rare	Chr3	15228368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018431	SmilChr03G001301	131018431	rna-XM_057947154.1	2	B136,C72