source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	16494305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	3	B56,B98,C69
typical_cds_rare	Chr3	16494357	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C69
typical_cds_rare	Chr3	16494360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	5	A14,A24,B46,B50,D3
typical_cds_rare	Chr3	16494385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C69
typical_cds_rare	Chr3	16494387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C69
typical_cds_rare	Chr3	16494417	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	2	C79,C82
lof_cds	Chr3	16494451	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C69
typical_cds_rare	Chr3	16494451	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C69
typical_cds_rare	Chr3	16494536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	3	B47,B78,C87
lof_cds	Chr3	16494711	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	53	A19,A25,A4,A5,B100,B113,B115,B119,B122,B124,B127,B128,B130,B139,B14,B19,B29,B31,B46,B5,B52,B55,B56,B57,B62,B63,B7,B71,B75,B76,B79,B8,B82,B83,B90,B92,B98,C11,C29,C34,C37,C40,C43,C44,C59,C62,C63,C69,C77,C79,C8,C9,D4
typical_cds_rare	Chr3	16494801	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	D4
lof_cds	Chr3	16495216	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	8	B103,B128,B81,B97,C31,C49,C55,C57
typical_cds_rare	Chr3	16495354	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B107
typical_cds_rare	Chr3	16495365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	3	A23,C16,C31
typical_cds_rare	Chr3	16495405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	2	B120,C43
typical_cds_rare	Chr3	16495425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	5	B120,B122,B55,C43,C77
typical_cds_rare	Chr3	16495482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	A9
typical_cds_rare	Chr3	16495526	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B74
typical_cds_rare	Chr3	16495553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B10
typical_cds_rare	Chr3	16495619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	3	B129,B2,C37
lof_cds	Chr3	16495656	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	65	A13,A14,A2,A25,A3,B108,B113,B120,B122,B128,B13,B130,B133,B134,B139,B19,B20,B22,B29,B32,B35,B49,B5,B50,B52,B53,B56,B60,B68,B7,B70,B73,B75,B77,B78,B79,B81,B82,B84,B87,B92,B96,B97,B99,C11,C14,C15,C23,C28,C3,C40,C43,C47,C49,C50,C54,C56,C6,C60,C61,C68,C74,C84,C9,D10
lof_cds	Chr3	16495690	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	12	A2,A22,A25,A3,B35,B49,B53,B79,B81,B87,C49,C56
lof_cds	Chr3	16495694	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B2
typical_cds_rare	Chr3	16495694	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B2
lof_cds	Chr3	16495710	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	78	A10,A14,A15,A16,A23,A9,B100,B103,B104,B106,B114,B121,B122,B123,B130,B131,B137,B138,B16,B23,B28,B3,B30,B34,B35,B38,B39,B42,B43,B44,B45,B5,B50,B54,B56,B60,B61,B62,B67,B72,B76,B8,B80,B81,B85,B86,B87,B88,B89,B9,B90,B91,B92,B96,C11,C24,C26,C31,C36,C39,C40,C41,C42,C45,C47,C52,C53,C56,C57,C65,C66,C69,C72,C84,C86,D10,D3,D6
typical_cds_rare	Chr3	16495783	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	B28
typical_cds_rare	Chr3	16495799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	3	A13,B75,C4
lof_cds	Chr3	16495837	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	38	A1,A15,A18,A5,A8,B101,B108,B122,B125,B129,B14,B16,B27,B28,B41,B54,B77,B95,B99,C10,C12,C17,C22,C24,C27,C29,C3,C30,C33,C40,C47,C48,C58,C62,C7,C78,C80,C87
lof_cds	Chr3	16495858	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	139	A13,A14,A15,A2,A21,A24,A25,A3,A5,A9,B1,B102,B105,B111,B113,B114,B117,B120,B121,B122,B123,B124,B125,B126,B127,B13,B132,B133,B134,B135,B138,B139,B15,B16,B17,B18,B19,B2,B20,B21,B25,B28,B29,B30,B31,B32,B34,B37,B39,B40,B42,B44,B46,B47,B48,B49,B5,B51,B53,B54,B56,B58,B59,B6,B60,B64,B66,B68,B69,B7,B70,B73,B75,B76,B77,B78,B79,B82,B84,B85,B87,B88,B90,B91,B99,C1,C10,C11,C13,C14,C18,C2,C20,C22,C23,C24,C25,C28,C29,C3,C31,C36,C38,C4,C40,C44,C47,C48,C50,C51,C56,C57,C58,C6,C60,C61,C63,C64,C66,C67,C69,C70,C72,C74,C75,C76,C77,C78,C84,C9,D1,D10,D11,D2,D4,D5,D7,D8,D9
lof_cds	Chr3	16495864	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	139	A13,A14,A15,A2,A21,A24,A25,A3,A5,A9,B1,B102,B104,B105,B111,B113,B114,B117,B120,B121,B122,B123,B124,B125,B126,B127,B13,B132,B133,B134,B135,B138,B139,B15,B16,B17,B18,B19,B2,B20,B21,B25,B28,B29,B30,B31,B32,B34,B37,B39,B40,B42,B44,B46,B47,B48,B49,B5,B51,B53,B54,B56,B58,B59,B6,B60,B64,B66,B68,B69,B7,B70,B73,B75,B76,B77,B78,B79,B82,B84,B85,B87,B88,B90,B91,B99,C1,C10,C11,C13,C14,C18,C2,C20,C22,C23,C24,C25,C28,C29,C3,C31,C38,C4,C40,C44,C47,C48,C50,C51,C56,C57,C58,C6,C60,C61,C63,C64,C66,C67,C69,C70,C72,C74,C75,C76,C77,C78,C84,C9,D1,D10,D11,D2,D4,D5,D7,D8,D9
lof_cds	Chr3	16495867	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	2	C33,D3
typical_cds_rare	Chr3	16495867	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	2	C33,D3
lof_cds	Chr3	16495868	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	55	A1,A15,A18,A5,A8,B101,B108,B109,B122,B125,B129,B139,B14,B16,B27,B28,B32,B38,B41,B42,B54,B56,B67,B72,B77,B87,B88,B90,B95,B99,C10,C12,C16,C17,C22,C24,C25,C27,C29,C3,C30,C31,C40,C47,C48,C51,C53,C58,C62,C69,C7,C72,C78,C80,C87
lof_cds	Chr3	16495886	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	9	B126,B28,B6,B60,B77,B84,C64,C67,C72
lof_cds	Chr3	16495967	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	6	B130,B135,B28,B82,C12,C83
typical_cds_rare	Chr3	16495988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	2	A15,B54
lof_cds	Chr3	16496005	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C63
typical_cds_rare	Chr3	16496005	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	C63
lof_cds	Chr3	16496008	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	11	A3,B114,B132,B140,B29,B33,B69,B79,C13,C14,C15
lof_cds	Chr3	16496011	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	10	A3,B132,B140,B29,B33,B69,B79,C13,C14,C15
lof_cds	Chr3	16496012	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	70	A1,A11,A21,A25,A5,A8,B101,B102,B107,B109,B111,B117,B118,B122,B124,B125,B127,B129,B139,B16,B18,B2,B27,B28,B31,B37,B43,B53,B54,B55,B56,B62,B66,B75,B77,B78,B85,B87,B89,B90,B92,B94,B95,B99,C10,C16,C17,C18,C20,C22,C24,C25,C29,C3,C30,C33,C43,C47,C48,C5,C51,C61,C62,C63,C7,C74,C77,C78,C80,C87
typical_cds_rare	Chr3	16496027	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	1	A15
lof_cds	Chr3	16496061	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	48	A11,A15,A21,A25,A5,A8,B107,B109,B111,B117,B118,B122,B127,B129,B139,B16,B18,B31,B37,B55,B62,B66,B7,B75,B77,B89,B94,B99,C17,C18,C20,C29,C3,C30,C33,C43,C47,C5,C61,C62,C7,C74,C77,C78,C8,C80,C87,C9
lof_cds	Chr3	16496063	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	48	A11,A15,A21,A25,A5,A8,B107,B109,B111,B118,B122,B127,B129,B139,B16,B18,B2,B28,B31,B37,B62,B66,B7,B75,B77,B89,B94,B99,C17,C18,C20,C29,C3,C30,C33,C43,C47,C5,C61,C62,C7,C74,C77,C78,C8,C80,C87,C9
lof_cds	Chr3	16496082	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	38	A21,A25,A5,A8,B107,B109,B117,B118,B122,B127,B129,B16,B18,B28,B37,B55,B62,B66,B7,B75,B89,B94,B99,C18,C20,C3,C30,C43,C48,C5,C7,C74,C77,C78,C8,C80,C87,C9
lof_cds	Chr3	16496085	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018460	SmilChr03G001390	131018460	rna-XM_057947180.1	37	A21,A25,A5,A8,B107,B109,B117,B118,B122,B127,B129,B16,B18,B28,B37,B55,B62,B66,B7,B75,B89,B94,B99,C18,C3,C30,C43,C48,C5,C7,C74,C77,C78,C8,C80,C87,C9