source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	16499317	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	12	B11,B138,B20,B21,B42,B43,B6,B63,B98,C49,C53,D2
lof_cds	Chr3	16499323	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	14	B11,B138,B20,B21,B42,B43,B6,B63,B98,C16,C49,C53,C65,D2
lof_cds	Chr3	16499446	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	18	A23,B108,B11,B118,B20,B42,B43,B6,B63,B69,B71,B98,C16,C49,C56,C65,C66,D2
lof_cds	Chr3	16499449	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B108,B118,B71,C56,C66
typical_cds_rare	Chr3	16499449	T	TGC	INDEL	2bp_insertion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B108,B118,B71,C56,C66
typical_cds_rare	Chr3	16499481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	B20,B43
lof_cds	Chr3	16499486	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	9	B104,B14,B47,B78,B89,C18,C29,C33,C87
typical_cds_rare	Chr3	16499489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B20
typical_cds_rare	Chr3	16499552	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C19
typical_cds_rare	Chr3	16499602	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	A4
typical_cds_rare	Chr3	16499702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	C58,C85
typical_cds_rare	Chr3	16499705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	B2,C12
typical_cds_rare	Chr3	16499710	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	B2,C12
typical_cds_rare	Chr3	16499716	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	B138,C59
typical_cds_rare	Chr3	16499725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	B15,B98
typical_cds_rare	Chr3	16499815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B11,B68,C19
typical_cds_rare	Chr3	16499832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B11,B37,B68,C19,C63
typical_cds_rare	Chr3	16499876	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B138
typical_cds_rare	Chr3	16499924	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	A23,B8,C2,C49
typical_cds_rare	Chr3	16499950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B107
typical_cds_rare	Chr3	16499952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	A8,B135,B2,C12,C65
lof_cds	Chr3	16499979	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B2
typical_cds_rare	Chr3	16499979	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B2
lof_cds	Chr3	16500152	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B20
typical_cds_rare	Chr3	16500152	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B20
typical_cds_rare	Chr3	16500159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B20
lof_cds	Chr3	16500168	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	17	B100,B136,B52,B64,B84,B94,C13,C34,C4,C45,C47,C58,C63,C72,C80,C84,D5
typical_cds_rare	Chr3	16500196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	A14,B17,C54,C9
typical_cds_rare	Chr3	16500211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B27
typical_cds_rare	Chr3	16500212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	B120,B27,B42,C3
typical_cds_rare	Chr3	16500225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C60
lof_cds	Chr3	16500258	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C3
typical_cds_rare	Chr3	16500258	G	GTC	INDEL	2bp_insertion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C3
lof_cds	Chr3	16500260	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C3
typical_cds_rare	Chr3	16500260	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C3
lof_cds	Chr3	16500296	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	7	B14,B27,B78,B89,C18,C29,C87
typical_cds_rare	Chr3	16500361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	A23,B10,B113,B41,C47
lof_cds	Chr3	16500381	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	B27,B78,C18,C33
typical_cds_rare	Chr3	16500381	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	B27,B78,C18,C33
lof_cds	Chr3	16500433	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	6	B17,B77,B90,B99,C55,C61
lof_cds	Chr3	16500488	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	13	B108,B125,B129,B18,B25,B39,B53,C25,C3,C51,C58,C77,C78
lof_cds	Chr3	16500492	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	A1,B105,B46,C54
typical_cds_rare	Chr3	16500492	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	A1,B105,B46,C54
lof_cds	Chr3	16500493	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	23	A8,B107,B135,B2,B21,B30,B44,B53,B54,B59,B83,B98,C12,C22,C30,C47,C49,C53,C59,C78,C85,C86,D2
typical_cds_rare	Chr3	16500549	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B125
lof_cds	Chr3	16500580	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	8	A7,B136,B26,B40,B45,C42,C53,C60
lof_cds	Chr3	16500621	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B119,B6,B81
typical_cds_rare	Chr3	16500621	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B119,B6,B81
lof_cds	Chr3	16500632	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	69	A2,A23,A8,A9,B10,B100,B102,B107,B11,B111,B113,B119,B120,B138,B139,B17,B2,B20,B21,B26,B29,B3,B30,B32,B34,B41,B42,B43,B44,B5,B53,B54,B59,B6,B63,B64,B65,B69,B79,B8,B81,B83,B93,B97,B98,C12,C13,C18,C2,C22,C24,C26,C30,C39,C47,C49,C53,C56,C57,C59,C60,C65,C74,C77,C86,C87,D11,D2,D7
lof_cds	Chr3	16500633	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	69	A2,A23,A8,A9,B10,B100,B102,B107,B11,B111,B113,B119,B120,B138,B139,B17,B2,B20,B21,B26,B29,B3,B30,B32,B34,B41,B42,B43,B44,B5,B53,B54,B59,B6,B63,B64,B65,B69,B79,B8,B81,B83,B93,B97,B98,C12,C13,C18,C2,C22,C24,C26,C30,C39,C47,C49,C53,C56,C57,C59,C60,C65,C74,C77,C86,C87,D11,D2,D7
typical_cds_rare	Chr3	16500641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B114,B137,B59,B85,C19
typical_cds_rare	Chr3	16500715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B114,B137,B59,B85,C19
typical_cds_rare	Chr3	16500717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	D10
typical_cds_rare	Chr3	16500719	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	2	C38,C68
typical_cds_rare	Chr3	16500747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	5	B65,B74,C18,C2,D11
lof_cds	Chr3	16500793	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B108,B125,B74
typical_cds_rare	Chr3	16500793	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B108,B125,B74
typical_cds_rare	Chr3	16500803	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C31
lof_cds	Chr3	16500841	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B63
typical_cds_rare	Chr3	16500841	CCA	C	INDEL	2bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B63
lof_cds	Chr3	16500916	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	24	A8,B102,B11,B113,B135,B138,B2,B20,B27,B29,B30,B32,B41,B42,B43,B53,B63,C2,C30,C49,C59,C74,C85,C87
lof_cds	Chr3	16500917	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	24	A8,B102,B11,B113,B135,B138,B2,B20,B27,B29,B30,B32,B41,B42,B43,B53,B63,C2,C30,C49,C59,C74,C85,C87
typical_cds_rare	Chr3	16500938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B33,C54,C82
lof_cds	Chr3	16500964	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B113,B41,B63
typical_cds_rare	Chr3	16500964	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B113,B41,B63
lof_cds	Chr3	16500969	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B113,B41,B63
typical_cds_rare	Chr3	16500969	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B113,B41,B63
typical_cds_rare	Chr3	16500979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	3	B113,B41,B63
typical_cds_rare	Chr3	16501020	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B33
typical_cds_rare	Chr3	16501172	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	B106
lof_cds	Chr3	16501241	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	11	A7,B136,B20,B24,B26,B40,B45,B8,C42,C53,C60
typical_cds_rare	Chr3	16501292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	1	C76
typical_cds_rare	Chr3	16501364	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	B123,B13,C28,C76
typical_cds_rare	Chr3	16501374	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018462	SmilChr03G001391	131018462	rna-XM_057947181.1	4	B123,B13,C28,C76