source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	17526617	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	60	A11,A13,A2,B104,B105,B11,B112,B120,B122,B140,B16,B20,B21,B27,B29,B3,B30,B34,B35,B44,B45,B47,B50,B55,B57,B6,B62,B64,B68,B69,B73,B78,B85,B89,B93,B97,C10,C2,C27,C28,C31,C35,C45,C48,C50,C51,C53,C56,C58,C60,C62,C63,C65,C67,C75,C81,C82,C85,D1,D8
typical_cds_rare	Chr3	17526650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17526651	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17526671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B108,B41,C15
lof_cds	Chr3	17526672	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B104
typical_cds_rare	Chr3	17526672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B104
lof_cds	Chr3	17526684	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C15
typical_cds_rare	Chr3	17526684	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C15
typical_cds_rare	Chr3	17526702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B74,B75,B77,C59,D6
typical_cds_rare	Chr3	17526744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C2
lof_cds	Chr3	17526750	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17526750	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
lof_cds	Chr3	17526769	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B68,D10
typical_cds_rare	Chr3	17526769	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B68,D10
lof_cds	Chr3	17526773	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B68,D10
typical_cds_rare	Chr3	17526773	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B68,D10
typical_cds_rare	Chr3	17526777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17526791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A8,B119,B68,D10,D11
typical_cds_rare	Chr3	17526794	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A8,B119,B68,D10
lof_cds	Chr3	17526802	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A8,B119,B68,D10
typical_cds_rare	Chr3	17526802	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A8,B119,B68,D10
lof_cds	Chr3	17526804	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A8,B119,B68,D10
typical_cds_rare	Chr3	17526804	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A8,B119,B68,D10
typical_cds_rare	Chr3	17526809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B67,B69
typical_cds_rare	Chr3	17526817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B119,B68,D10
typical_cds_rare	Chr3	17526828	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B121,B33,C61
typical_cds_rare	Chr3	17526836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D9
typical_cds_rare	Chr3	17526843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C11,C69
typical_cds_rare	Chr3	17526845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A6,B120,C33,C35,D1
typical_cds_rare	Chr3	17526846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17526913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C2
typical_cds_rare	Chr3	17526937	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B74,B75,B77,C59,D6
typical_cds_rare	Chr3	17526957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A6,B120,C33,C35,D1
typical_cds_rare	Chr3	17526977	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A22,B110,B122,B93,D6
typical_cds_rare	Chr3	17527027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A6,B59,B94,D4
typical_cds_rare	Chr3	17527046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C71
typical_cds_rare	Chr3	17527065	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A6,B120,C33,C35,D1
typical_cds_rare	Chr3	17527071	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17527113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17527114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D9
typical_cds_rare	Chr3	17527128	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B74,B75,B77,C59,D6
typical_cds_rare	Chr3	17527142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B74,B75,B77,C59,D6
lof_cds	Chr3	17527151	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	130	A10,A11,A13,A14,A15,A18,A19,A2,A22,A25,A7,A9,B103,B104,B105,B108,B109,B11,B110,B111,B112,B114,B12,B120,B122,B123,B127,B132,B133,B137,B138,B140,B16,B20,B21,B27,B28,B29,B3,B30,B32,B34,B35,B36,B44,B45,B47,B50,B55,B57,B59,B6,B60,B62,B64,B66,B68,B69,B71,B72,B73,B74,B75,B76,B77,B78,B79,B81,B85,B88,B89,B9,B93,B94,B97,B99,C1,C10,C11,C12,C14,C15,C17,C2,C22,C23,C27,C28,C30,C31,C34,C35,C39,C41,C43,C45,C46,C48,C49,C5,C50,C51,C53,C56,C57,C58,C59,C60,C62,C63,C64,C66,C67,C71,C73,C74,C75,C76,C8,C81,C82,C85,C86,C87,C9,D1,D10,D6,D8,D9
typical_cds_rare	Chr3	17527203	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B41
typical_cds_rare	Chr3	17527220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A20,B24,B31,C30
typical_cds_rare	Chr3	17527238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A20,B24,B31,B51
typical_cds_rare	Chr3	17527242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B24,B31,B51
typical_cds_rare	Chr3	17527252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	B113,B126,B52,C55
lof_cds	Chr3	17527258	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	7	A20,A21,B24,B31,B51,B67,C77
lof_cds	Chr3	17527265	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	9	A20,A21,B131,B22,B24,B31,B51,B67,C77
typical_cds_rare	Chr3	17527267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	A4,B71
typical_cds_rare	Chr3	17527300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	A21
typical_cds_rare	Chr3	17527303	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B53,C11,C69
lof_cds	Chr3	17527332	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	13	A1,A21,B101,B2,B22,B52,B53,C44,C58,C6,C77,D11,D3
lof_cds	Chr3	17527334	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B45,C34,C7,C72,D8
typical_cds_rare	Chr3	17527334	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B45,C34,C7,C72,D8
typical_cds_rare	Chr3	17527339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	B59,B94,D4
typical_cds_rare	Chr3	17527347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B51
lof_cds	Chr3	17527371	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	44	A1,A2,A20,A21,A24,A5,B1,B101,B106,B107,B124,B131,B135,B139,B2,B22,B24,B31,B35,B51,B52,B53,B54,B57,B61,B67,B7,B85,C19,C20,C24,C25,C44,C46,C51,C52,C58,C6,C62,C74,C77,C82,D3,D4
typical_cds_rare	Chr3	17527385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B15,B19
lof_cds	Chr3	17527433	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B107
typical_cds_rare	Chr3	17527433	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B107
lof_cds	Chr3	17527451	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	10	A18,A23,A7,B10,B107,B113,B137,B24,B52,C85
lof_cds	Chr3	17527455	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	39	A18,A21,A24,A9,B100,B101,B102,B111,B126,B127,B133,B136,B23,B26,B37,B4,B41,B50,B55,B57,B60,B70,B77,B9,C16,C17,C2,C20,C21,C27,C36,C40,C5,C54,C55,C65,C72,C74,D8
lof_cds	Chr3	17527476	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	A23,A7,B107
typical_cds_rare	Chr3	17527476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	A23,A7,B107
typical_cds_rare	Chr3	17527495	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B23,D3
typical_cds_rare	Chr3	17527500	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C26
typical_cds_rare	Chr3	17527533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B23,D3
typical_cds_rare	Chr3	17527546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B45,C34,C7,C72,D8
typical_cds_rare	Chr3	17527572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	3	C11,C69,D11
lof_cds	Chr3	17527612	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B28,B32
typical_cds_rare	Chr3	17527612	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B28,B32
typical_cds_rare	Chr3	17527698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B67,B69
typical_cds_rare	Chr3	17527709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C23,C39
typical_cds_rare	Chr3	17527725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C32,C68
typical_cds_rare	Chr3	17527735	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	D11
typical_cds_rare	Chr3	17527765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	B20,B3,C45,C85
typical_cds_rare	Chr3	17527766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C11,C69
typical_cds_rare	Chr3	17527928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	A6,B59,B94,D4
typical_cds_rare	Chr3	17527942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	B45,C34,C7,C72,D8
typical_cds_rare	Chr3	17528029	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C11,C69
typical_cds_rare	Chr3	17528048	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	B120,B62
lof_cds	Chr3	17528086	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B21
typical_cds_rare	Chr3	17528086	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B21
typical_cds_rare	Chr3	17528103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	B130,B136,B14,C33
typical_cds_rare	Chr3	17528104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B57
lof_cds	Chr3	17528111	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	A6,B94
typical_cds_rare	Chr3	17528111	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	A6,B94
typical_cds_rare	Chr3	17528112	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	5	A19,B11,B113,B30,C31
typical_cds_rare	Chr3	17528121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	C2
typical_cds_rare	Chr3	17528130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	4	B125,B81,C41,C6
typical_cds_rare	Chr3	17528166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	1	B93
lof_cds	Chr3	17528186	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	50	A1,A3,B101,B110,B112,B121,B125,B134,B140,B16,B18,B22,B27,B3,B33,B40,B45,B47,B53,B7,B72,B86,B88,B9,B90,C11,C12,C15,C2,C20,C22,C3,C34,C35,C38,C44,C47,C49,C50,C61,C69,C7,C72,C80,C86,D11,D2,D6,D8,D9
typical_cds_rare	Chr3	17528199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131017932	SmilChr03G001465	131017932	rna-XM_057946678.1	2	C11,C69