source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	20012129	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	D1
typical_cds_rare	Chr3	20012135	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	A11,B104,B2,C74
typical_cds_rare	Chr3	20012139	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B118,B126,B24
lof_cds	Chr3	20012157	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A2,B109,B119,C12,C57
typical_cds_rare	Chr3	20012157	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A2,B109,B119,C12,C57
typical_cds_rare	Chr3	20012158	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B78,B81,C63
lof_cds	Chr3	20012159	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A2,B109,B119,C12,C57
typical_cds_rare	Chr3	20012159	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A2,B109,B119,C12,C57
typical_cds_rare	Chr3	20012163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	A24,A6,D7
typical_cds_rare	Chr3	20012195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B104
typical_cds_rare	Chr3	20012196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B132,B43
typical_cds_rare	Chr3	20012200	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B123,B31
typical_cds_rare	Chr3	20012260	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A11,B131,B4,C18,C86
typical_cds_rare	Chr3	20012272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A9,B16,C12,C39,C67
lof_cds	Chr3	20012284	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	15	A14,A22,B105,B108,B136,B44,B55,B58,B7,C16,C38,C47,C61,C65,C80
lof_cds	Chr3	20012285	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	7	A23,A7,B122,B21,C78,C79,C9
typical_cds_rare	Chr3	20012295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B104
typical_cds_rare	Chr3	20012299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	B120,B66,B73,B83
typical_cds_rare	Chr3	20012300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B87
typical_cds_rare	Chr3	20012303	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B87,C45,C55
typical_cds_rare	Chr3	20012304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A19,B100,B27,C56,C9
typical_cds_rare	Chr3	20012320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B110,B132,B5
typical_cds_rare	Chr3	20012323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B138,B140,B56
typical_cds_rare	Chr3	20012332	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B131,C82
typical_cds_rare	Chr3	20012334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	B106,B49,B60,B92
lof_cds	Chr3	20012368	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	18	B101,B110,B13,B33,B39,B78,B82,C12,C14,C23,C29,C30,C51,C59,C71,C73,C75,C78
typical_cds_rare	Chr3	20012369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B122,B52
typical_cds_rare	Chr3	20012371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	D4
typical_cds_rare	Chr3	20012391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	C30,C51,C73
typical_cds_rare	Chr3	20012395	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B93
lof_cds	Chr3	20013392	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B44,B56
typical_cds_rare	Chr3	20013392	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B44,B56
typical_cds_rare	Chr3	20013400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B2,B84
typical_cds_rare	Chr3	20013466	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B37,B51,C72
typical_cds_rare	Chr3	20013492	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B23
typical_cds_rare	Chr3	20013546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	B31,B54,B85,C23,C64
lof_cds	Chr3	20013549	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B130,B55
typical_cds_rare	Chr3	20013549	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B130,B55
typical_cds_rare	Chr3	20013565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B100
typical_cds_rare	Chr3	20013574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	C4
lof_cds	Chr3	20013581	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B128,B52,B80
typical_cds_rare	Chr3	20013581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B128,B52,B80
typical_cds_rare	Chr3	20013582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	A5,C7
typical_cds_rare	Chr3	20013588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B80
lof_cds	Chr3	20013593	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	8	A14,A19,B120,B13,B42,C59,C64,C67
lof_cds	Chr3	20013607	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	C52,C77
typical_cds_rare	Chr3	20013607	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	C52,C77
typical_cds_rare	Chr3	20013608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	A8
typical_cds_rare	Chr3	20013642	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B139,B30
typical_cds_rare	Chr3	20013654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B139,C25
typical_cds_rare	Chr3	20013655	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	A11,B112,C48
typical_cds_rare	Chr3	20013659	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	A16,B128
typical_cds_rare	Chr3	20013672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B126,B134,B98
lof_cds	Chr3	20013685	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	8	A1,A4,A5,B137,B139,B45,C12,D6
typical_cds_rare	Chr3	20013698	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	B122,C25
typical_cds_rare	Chr3	20013711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	1	B124
lof_cds	Chr3	20013723	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	12	B17,B2,B49,B50,B60,B83,B98,C15,C17,C48,C6,C61
lof_cds	Chr3	20013734	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	106	A10,A11,A14,A21,A4,A5,A6,A7,A8,B1,B10,B101,B104,B111,B118,B12,B120,B121,B124,B125,B126,B129,B132,B138,B14,B15,B17,B18,B19,B2,B21,B22,B24,B3,B37,B4,B41,B42,B45,B48,B49,B5,B50,B53,B56,B58,B60,B62,B66,B67,B68,B71,B72,B73,B77,B78,B79,B80,B81,B83,B90,B91,B92,B94,B97,B98,C11,C13,C14,C15,C17,C2,C24,C25,C27,C29,C3,C32,C34,C38,C39,C40,C41,C45,C48,C49,C5,C52,C56,C57,C59,C6,C61,C63,C67,C68,C7,C75,C77,C79,C82,C83,C87,D5,D7,D9
lof_cds	Chr3	20013737	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	11	A10,A14,A15,B109,B138,B66,B73,B76,B78,C17,C49
typical_cds_rare	Chr3	20013746	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	A8,C15,D9
lof_cds	Chr3	20013755	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	40	A18,A19,A2,A7,B100,B108,B11,B122,B127,B135,B137,B138,B14,B140,B17,B2,B34,B35,B40,B41,B50,B56,B58,B66,B7,B74,B84,B88,B89,C10,C26,C3,C34,C44,C69,C81,C82,D10,D6,D7
lof_cds	Chr3	20013758	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	6	B24,B76,C11,C45,C61,C69
typical_cds_rare	Chr3	20013776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	2	C51,C6
typical_cds_rare	Chr3	20013788	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B108,B122,B58
lof_cds	Chr3	20013825	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	14	A11,A9,B17,B20,B52,B6,B83,B94,B98,C19,C30,C31,C39,C53
typical_cds_rare	Chr3	20013855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	A10,A24,B139,D6
lof_cds	Chr3	20013857	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	15	A10,A22,A23,B23,B29,B30,B46,B50,B59,B63,B73,B78,C1,C27,C66
lof_cds	Chr3	20013862	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A23,B46,B59,B63,B78
typical_cds_rare	Chr3	20013862	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	5	A23,B46,B59,B63,B78
typical_cds_rare	Chr3	20013885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	3	B107,B133,B31
typical_cds_rare	Chr3	20013888	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	A3,B39,B44,B97
lof_cds	Chr3	20013907	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	B11,B34,C12,C26
typical_cds_rare	Chr3	20013907	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131018504	SmilChr03G001582	131018504	rna-XM_057947223.1	4	B11,B34,C12,C26