source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	20257766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	A6
typical_cds_rare	Chr3	20257780	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	B77
typical_cds_rare	Chr3	20257927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	C17
typical_cds_rare	Chr3	20257940	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	A13,B30,B91
lof_cds	Chr3	20257947	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	5	A1,B129,B132,B2,C12
typical_cds_rare	Chr3	20257947	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	5	A1,B129,B132,B2,C12
typical_cds_rare	Chr3	20258000	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	C83
typical_cds_rare	Chr3	20258003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B52,B9
lof_cds	Chr3	20258026	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	A13
typical_cds_rare	Chr3	20258026	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	A13
typical_cds_rare	Chr3	20258128	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	A2,B108,B122
typical_cds_rare	Chr3	20258132	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	C49,C5,C62
typical_cds_rare	Chr3	20258137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B75,B97,C38,D6
typical_cds_rare	Chr3	20258186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	B22
lof_cds	Chr3	20258188	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B4,B95
typical_cds_rare	Chr3	20258188	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B4,B95
typical_cds_rare	Chr3	20258208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B134,B24,C3
typical_cds_rare	Chr3	20258236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B82,B95,C70,C77
lof_cds	Chr3	20258238	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B102,B46,C46,C63
typical_cds_rare	Chr3	20258238	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B102,B46,C46,C63
typical_cds_rare	Chr3	20258260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	5	B52,B72,B73,C72,C86
typical_cds_rare	Chr3	20258291	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	5	B10,B101,B41,C7,D4
lof_cds	Chr3	20258296	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	67	A1,A10,A11,A2,A24,A25,A3,A6,B10,B117,B118,B120,B130,B14,B20,B21,B23,B25,B27,B29,B3,B4,B44,B48,B49,B50,B51,B62,B69,B73,B79,B80,B82,B89,B91,B92,B94,B95,B97,B98,C10,C17,C25,C27,C29,C31,C41,C44,C46,C47,C51,C53,C54,C55,C60,C61,C63,C65,C68,C7,C77,C79,C80,C81,C87,D5,D8
typical_cds_rare	Chr3	20258301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	C28
lof_cds	Chr3	20258314	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	22	A16,A18,B11,B129,B131,B30,B46,B52,B53,B68,B72,B73,B87,B91,C28,C30,C34,C35,C44,C72,C83,C86
lof_cds	Chr3	20258320	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	13	A23,B130,B136,B33,B4,B6,C19,C31,C39,C56,C58,C60,C75
typical_cds_rare	Chr3	20258326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B129,B68,B87,C35
typical_cds_rare	Chr3	20258332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B140,B26
lof_cds	Chr3	20258344	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	8	A14,B115,B3,B37,C38,C79,C87,C9
typical_cds_rare	Chr3	20258345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B134,B24,C8
lof_cds	Chr3	20258365	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	27	A2,B10,B106,B118,B120,B136,B20,B25,B3,B49,B50,B51,B58,B85,B91,B94,B97,C10,C12,C27,C36,C5,C58,C63,C7,C74,C81
lof_cds	Chr3	20258371	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	124	A1,A13,A15,A16,A20,A21,A23,A24,A3,A4,A5,A7,A8,A9,B10,B102,B103,B107,B11,B111,B113,B114,B115,B117,B119,B12,B128,B130,B133,B134,B135,B136,B137,B139,B15,B16,B17,B19,B23,B25,B27,B30,B32,B33,B34,B36,B38,B39,B4,B40,B41,B42,B44,B54,B56,B57,B58,B59,B6,B60,B61,B62,B65,B66,B68,B7,B72,B73,B75,B77,B78,B79,B87,B88,B89,B95,B96,C12,C13,C14,C15,C16,C19,C20,C22,C23,C25,C30,C31,C32,C34,C37,C39,C40,C43,C45,C49,C5,C51,C54,C56,C58,C59,C60,C62,C64,C67,C68,C70,C71,C72,C73,C75,C78,C83,C84,C85,D1,D2,D3,D5,D6,D8,D9
lof_cds	Chr3	20258372	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	124	A1,A13,A15,A16,A20,A21,A23,A24,A3,A4,A5,A7,A8,A9,B10,B102,B103,B107,B11,B111,B113,B114,B115,B117,B119,B12,B128,B130,B133,B134,B135,B136,B137,B139,B15,B16,B17,B19,B23,B25,B27,B30,B32,B33,B34,B36,B38,B39,B4,B40,B41,B42,B44,B54,B56,B57,B58,B59,B6,B60,B61,B62,B65,B66,B68,B7,B72,B73,B75,B77,B78,B79,B87,B88,B89,B95,B96,C12,C13,C14,C15,C16,C19,C20,C22,C23,C25,C30,C31,C32,C34,C37,C39,C40,C43,C45,C49,C5,C51,C54,C56,C58,C59,C60,C62,C64,C67,C68,C70,C71,C72,C73,C74,C75,C78,C83,C84,C85,D1,D2,D3,D5,D6,D9
typical_cds_rare	Chr3	20258378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B129,B18,B68,B87
typical_cds_rare	Chr3	20258386	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	1	D6
lof_cds	Chr3	20258398	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	198	A1,A10,A13,A15,A16,A2,A20,A21,A23,A24,A3,A4,A6,A7,A8,A9,B10,B100,B101,B102,B103,B106,B107,B108,B11,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B122,B123,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B15,B16,B17,B19,B2,B20,B21,B23,B24,B25,B26,B27,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B44,B45,B46,B47,B48,B49,B5,B50,B51,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B67,B68,B7,B72,B74,B75,B77,B78,B79,B8,B80,B81,B82,B83,B85,B86,B87,B88,B89,B91,B93,B94,B95,B96,B97,B99,C10,C11,C12,C13,C14,C15,C16,C17,C19,C20,C21,C22,C23,C25,C26,C27,C28,C30,C31,C32,C34,C35,C36,C37,C39,C40,C43,C44,C45,C46,C47,C48,C5,C50,C51,C53,C54,C55,C56,C58,C59,C60,C62,C63,C64,C67,C68,C69,C7,C71,C72,C73,C74,C75,C78,C8,C80,C81,C82,C83,C84,C85,C86,C9,D1,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	20258405	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B1,B122
typical_cds_rare	Chr3	20258405	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	2	B1,B122
typical_cds_rare	Chr3	20258407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B117,B135,B2
typical_cds_rare	Chr3	20258409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	4	B129,B18,B68,B87
lof_cds	Chr3	20258428	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	17	A10,B111,B123,B129,B133,B2,B29,B36,B81,B83,B88,B95,C17,C26,C27,C53,C9
lof_cds	Chr3	20258431	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	A11,A21,B13
typical_cds_rare	Chr3	20258431	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	A11,A21,B13
lof_cds	Chr3	20258440	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	6	B110,B12,B2,B31,C48,C82
lof_cds	Chr3	20258455	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B138,C3,C55
typical_cds_rare	Chr3	20258455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B138,C3,C55
typical_cds_rare	Chr3	20258479	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B11,C28,C44
typical_cds_rare	Chr3	20258495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	5	A1,B129,B132,B2,C12
typical_cds_rare	Chr3	20258499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	B4,B40,C47
typical_cds_rare	Chr3	20258507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	3	C12,C27,C46
lof_cds	Chr3	20258511	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018051	SmilChr03G001595	131018051	rna-XM_057946786.1	22	A7,A8,B103,B134,B21,B27,B43,B5,B6,B62,B64,B66,B82,B87,C11,C12,C36,C6,C62,C67,C69,D4