source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	21501953	T	TGA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A7,B8,C35
typical_cds_rare	Chr3	21501953	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A7,B8,C35
lof_cds	Chr3	21501954	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A7,B8,C35
typical_cds_rare	Chr3	21501954	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A7,B8,C35
typical_cds_rare	Chr3	21502005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B137,C19
typical_cds_rare	Chr3	21502007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	B13
typical_cds_rare	Chr3	21502023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B14,D1
typical_cds_rare	Chr3	21502028	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	C79
typical_cds_rare	Chr3	21502029	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B108,C36,C45
typical_cds_rare	Chr3	21502115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	C58,C85
typical_cds_rare	Chr3	21502122	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	C49
lof_cds	Chr3	21502152	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	D5
typical_cds_rare	Chr3	21502152	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	D5
typical_cds_rare	Chr3	21502174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	C28
typical_cds_rare	Chr3	21502186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A21,B102,C72
typical_cds_rare	Chr3	21502196	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	C27
lof_cds	Chr3	21502348	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A10,B12,B14,B34
typical_cds_rare	Chr3	21502348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A10,B12,B14,B34
typical_cds_rare	Chr3	21502349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	B40
typical_cds_rare	Chr3	21502365	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	B118,B68,C28,C82
typical_cds_rare	Chr3	21502372	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	5	A25,B63,C58,C66,C83
lof_cds	Chr3	21502385	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	218	A1,A10,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B100,B101,B102,B103,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B128,B131,B132,B133,B134,B135,B136,B137,B139,B14,B140,B15,B16,B17,B18,B19,B2,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B52,B53,B54,B55,B56,B58,B59,B60,B61,B63,B64,B65,B67,B69,B7,B70,B71,B72,B73,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B90,B91,B92,B93,B94,B95,B97,B98,B99,C10,C11,C13,C15,C16,C17,C2,C21,C22,C23,C24,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C42,C43,C44,C45,C46,C49,C51,C52,C53,C54,C55,C57,C58,C59,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C70,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D7,D8,D9
typical_cds_rare	Chr3	21502400	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B140,B33,C82
typical_cds_rare	Chr3	21502401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	C9
lof_cds	Chr3	21502404	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	7	A14,A22,A24,B46,B50,C27,D3
typical_cds_rare	Chr3	21502409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A25,B63,C83
typical_cds_rare	Chr3	21502433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
typical_cds_rare	Chr3	21502453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	D7
lof_cds	Chr3	21502458	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	26	A14,A20,B100,B108,B16,B17,B2,B32,B33,B40,B49,B54,B56,B72,B75,B9,B97,C10,C23,C29,C40,C42,C45,C46,C73,C77
lof_cds	Chr3	21502459	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
typical_cds_rare	Chr3	21502459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
lof_cds	Chr3	21502466	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	30	A10,A23,A6,B103,B105,B120,B131,B139,B14,B21,B38,B52,B64,B76,B98,C11,C13,C21,C31,C36,C39,C48,C52,C55,C57,C67,C69,C75,C86,D3
typical_cds_rare	Chr3	21502550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B137,C19
typical_cds_rare	Chr3	21502565	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	B20
typical_cds_rare	Chr3	21502567	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
typical_cds_rare	Chr3	21502584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	C32,C68
typical_cds_rare	Chr3	21502649	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B12,B35,B55
typical_cds_rare	Chr3	21502664	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A9,C18,C49
lof_cds	Chr3	21502810	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	13	B124,B139,B31,B4,B41,B49,B59,B79,B87,B98,C55,C72,D8
lof_cds	Chr3	21502834	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	C77,D10
typical_cds_rare	Chr3	21502834	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	C77,D10
typical_cds_rare	Chr3	21502850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B14,D1
lof_cds	Chr3	21502876	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A9,C18,C49
typical_cds_rare	Chr3	21502876	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A9,C18,C49
typical_cds_rare	Chr3	21502912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
typical_cds_rare	Chr3	21502916	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B14,D1
typical_cds_rare	Chr3	21502943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A25,B93,C23,C64
typical_cds_rare	Chr3	21502958	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	B55,B77,B99,C26
typical_cds_rare	Chr3	21502965	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	A21,B66
typical_cds_rare	Chr3	21502988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B93,C23,C64
typical_cds_rare	Chr3	21502999	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B110,C76
lof_cds	Chr3	21503009	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A13,C13,C25,C5
typical_cds_rare	Chr3	21503009	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A13,C13,C25,C5
lof_cds	Chr3	21503013	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	77	A16,A18,A19,A2,A22,A7,B101,B104,B108,B109,B112,B114,B115,B12,B120,B125,B129,B132,B135,B136,B15,B19,B2,B20,B21,B25,B26,B35,B40,B45,B53,B55,B56,B58,B59,B62,B64,B65,B66,B68,B73,B74,B75,B8,B82,B88,B94,B96,C1,C10,C11,C12,C20,C23,C24,C34,C35,C40,C41,C42,C44,C45,C47,C52,C56,C6,C62,C63,C67,C69,C76,C80,C81,C84,C86,D1,D2
typical_cds_rare	Chr3	21503636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	B125,B47,B92,C87
typical_cds_rare	Chr3	21503659	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	D10
typical_cds_rare	Chr3	21503687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B83,C58
typical_cds_rare	Chr3	21503768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B4,B98,C39
typical_cds_rare	Chr3	21503783	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	2	B15,C81
lof_cds	Chr3	21503803	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	29	A21,B102,B105,B112,B120,B13,B131,B19,B22,B33,B4,B7,B83,B98,C11,C15,C31,C34,C42,C48,C52,C55,C57,C69,C72,C74,C77,C84,D5
typical_cds_rare	Chr3	21503817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	A10,B14,B34
lof_cds	Chr3	21503840	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	10	A14,B35,B50,B59,C20,C31,C35,C6,C9,D2
typical_cds_rare	Chr3	21503976	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	4	A21,B66,C58,C85
typical_cds_rare	Chr3	21503999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	1	B79
typical_cds_rare	Chr3	21504007	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018523	SmilChr03G001654	131018523	rna-XM_057947241.1	3	B102,C31,C84