source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	25588957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	A4,B137,B16,C19
typical_cds_rare	Chr3	25588981	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	A4,B137,B16,C19
typical_cds_rare	Chr3	25588983	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	A4,B137,B16,C19
typical_cds_rare	Chr3	25588985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	B139,C60,D7
lof_cds	Chr3	25588996	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	16	B1,B115,B120,B122,B127,B138,B28,B30,B37,C3,C32,C38,C68,C85,D4,D7
typical_cds_rare	Chr3	25589000	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	B14,B87,C65,D1
typical_cds_rare	Chr3	25589021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	D3
typical_cds_rare	Chr3	25589028	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	B106
typical_cds_rare	Chr3	25589033	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	B9
lof_cds	Chr3	25589046	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	19	B103,B110,B125,B13,B30,B36,B40,B65,B92,C17,C30,C35,C5,C50,C68,C7,C75,C76,D4
typical_cds_rare	Chr3	25589055	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	B32,B73,B74,C50,C78
typical_cds_rare	Chr3	25589060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	D2
typical_cds_rare	Chr3	25589061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	C64,C66
typical_cds_rare	Chr3	25589062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	C62
typical_cds_rare	Chr3	25589083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	D11
typical_cds_rare	Chr3	25589098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	B125,C52,C64,C66
lof_cds	Chr3	25589120	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	C16,C5,C79
typical_cds_rare	Chr3	25589120	C	CGG	INDEL	2bp_insertion	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	C16,C5,C79
lof_cds	Chr3	25589124	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	C16,C5,C79
typical_cds_rare	Chr3	25589124	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	C16,C5,C79
typical_cds_rare	Chr3	25589164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B131,C16
typical_cds_rare	Chr3	25589195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A7,B40,C1,C2,C37
typical_cds_rare	Chr3	25589222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A13,B122,B31,B6,C11
lof_cds	Chr3	25589223	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	24	A23,A9,B111,B121,B122,B128,B21,B35,B49,B5,B54,B76,B85,B87,B92,C3,C37,C60,C81,C83,C85,D1,D11,D5
typical_cds_rare	Chr3	25589225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	C62,C80
typical_cds_rare	Chr3	25589236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	B35,B78,C14,D1
typical_cds_rare	Chr3	25589240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	B68,B69,B91,C61,D3
typical_cds_rare	Chr3	25589267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A10,A7,C1,C2,C37
typical_cds_rare	Chr3	25589270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	B114,B43,B60,B90
typical_cds_rare	Chr3	25589287	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B19,C26
typical_cds_rare	Chr3	25589288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	A5
typical_cds_rare	Chr3	25589302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A4,B137,B16,B81,C19
typical_cds_rare	Chr3	25589313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	A10,B48,D5
typical_cds_rare	Chr3	25589322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B140,C62
lof_cds	Chr3	25589356	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B104,D11
typical_cds_rare	Chr3	25589356	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B104,D11
typical_cds_rare	Chr3	25589359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	A6
lof_cds	Chr3	25589362	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A24,B102,B32,B36,D10
typical_cds_rare	Chr3	25589362	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A24,B102,B32,B36,D10
lof_cds	Chr3	25589377	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A14,A24,B28,B50,D3
typical_cds_rare	Chr3	25589377	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A14,A24,B28,B50,D3
typical_cds_rare	Chr3	25589427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	D11
lof_cds	Chr3	25589439	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	18	A10,A13,A14,A2,A9,B108,B111,B12,B123,B31,B35,B39,B46,B59,B66,C23,C70,D11
typical_cds_rare	Chr3	25589447	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	5	A8,B81,C10,C24,C85
typical_cds_rare	Chr3	25589467	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	3	B125,B48,C56
lof_cds	Chr3	25589562	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	13	A16,A22,B13,B139,B64,B87,C24,C34,C42,C6,C63,C67,C72
typical_cds_rare	Chr3	25589584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	1	C65
typical_cds_rare	Chr3	25589588	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	2	B13,B53
typical_cds_rare	Chr3	25589590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018583	SmilChr03G001856	131018583	rna-XM_057947297.1	4	B73,B74,C50,C78