source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	27727298	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B108,B22
lof_cds	Chr3	27727327	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	10	B113,B122,B125,B126,B65,B79,C11,C3,C52,D6
lof_cds	Chr3	27727331	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	11	B113,B122,B125,B126,B42,B65,B79,C11,C3,C52,D6
typical_cds_rare	Chr3	27727337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B140
typical_cds_rare	Chr3	27727342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C38
lof_cds	Chr3	27727344	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C68
typical_cds_rare	Chr3	27727344	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C68
typical_cds_rare	Chr3	27727353	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B78
lof_cds	Chr3	27727375	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	37	A16,A3,B101,B103,B109,B112,B117,B12,B120,B136,B137,B14,B140,B21,B43,B45,B47,B53,B65,B67,B73,B8,B80,B85,B90,B92,B94,C10,C21,C52,C6,C60,C68,C75,C78,D5,D6
lof_cds	Chr3	27727376	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	37	A16,A3,B101,B103,B109,B112,B117,B12,B120,B136,B137,B14,B140,B21,B43,B45,B47,B53,B65,B67,B73,B8,B80,B85,B90,B92,B94,C10,C21,C52,C6,C60,C68,C75,C78,D5,D6
typical_cds_rare	Chr3	27727381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B123
lof_cds	Chr3	27727383	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	52	A16,A3,A6,B101,B103,B106,B109,B112,B113,B117,B12,B120,B122,B123,B125,B126,B129,B136,B137,B14,B140,B21,B25,B35,B42,B43,B45,B47,B53,B65,B67,B73,B79,B8,B80,B85,B90,B92,B94,C10,C21,C52,C6,C60,C64,C66,C68,C75,C78,C83,D5,D6
lof_cds	Chr3	27727384	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	20	B103,B113,B25,B33,B34,B36,B46,B64,B78,C10,C14,C17,C25,C27,C30,C38,C5,C6,D7,D8
typical_cds_rare	Chr3	27727411	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B22
typical_cds_rare	Chr3	27727438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B20,B58,B96
typical_cds_rare	Chr3	27727440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C65
typical_cds_rare	Chr3	27727480	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B20,B58,B96
typical_cds_rare	Chr3	27729564	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C87
lof_cds	Chr3	27729594	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	18	A21,B131,B18,B19,B26,B47,B6,B79,C14,C21,C25,C26,C37,C42,C56,C63,D6,D7
typical_cds_rare	Chr3	27729597	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B60
lof_cds	Chr3	27729599	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B139
typical_cds_rare	Chr3	27729599	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B139
typical_cds_rare	Chr3	27729611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	B24,C4,C56,C59
typical_cds_rare	Chr3	27729618	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C74
typical_cds_rare	Chr3	27729621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C74
lof_cds	Chr3	27729640	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B109,C9
typical_cds_rare	Chr3	27729640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B109,C9
lof_cds	Chr3	27729641	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B60,C83
typical_cds_rare	Chr3	27729641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B60,C83
typical_cds_rare	Chr3	27729650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	A1,A7,C78
lof_cds	Chr3	27729651	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C83
typical_cds_rare	Chr3	27729651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C83
typical_cds_rare	Chr3	27729656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	A7,C78
typical_cds_rare	Chr3	27729657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	A1,C74,C83
typical_cds_rare	Chr3	27729870	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B72,B86,C1
typical_cds_rare	Chr3	27729872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B131
typical_cds_rare	Chr3	27729926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B2,C52
typical_cds_rare	Chr3	27729958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B53,D8
lof_cds	Chr3	27729967	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B80
typical_cds_rare	Chr3	27729967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B80
typical_cds_rare	Chr3	27729969	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B21
typical_cds_rare	Chr3	27730011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B80
typical_cds_rare	Chr3	27730036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C26,C67
typical_cds_rare	Chr3	27730038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C26,C67
typical_cds_rare	Chr3	27730040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B118
typical_cds_rare	Chr3	27730049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C26,C67
typical_cds_rare	Chr3	27730050	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	D11
typical_cds_rare	Chr3	27730056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B113,B79,B86
lof_cds	Chr3	27730143	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B118
typical_cds_rare	Chr3	27730143	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B118
typical_cds_rare	Chr3	27730221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	D3
typical_cds_rare	Chr3	27730229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C36
typical_cds_rare	Chr3	27730232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B113,B118,B52,B72,C58
lof_cds	Chr3	27730254	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B113,B52,B73,C3,C71
typical_cds_rare	Chr3	27730254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B113,B52,B73,C3,C71
typical_cds_rare	Chr3	27730259	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B65,C14
lof_cds	Chr3	27730283	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C23,C26
typical_cds_rare	Chr3	27730283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C23,C26
typical_cds_rare	Chr3	27730292	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B64,C17,C23,C26,C75
typical_cds_rare	Chr3	27730301	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	B65,B90,B92,C14
lof_cds	Chr3	27730302	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	17	A9,B108,B12,B16,B32,B50,B65,B74,B90,B92,C14,C2,C64,C82,C83,C87,D8
typical_cds_rare	Chr3	27730311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	A13,B113,C20,C25,C5
typical_cds_rare	Chr3	27730320	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B72
typical_cds_rare	Chr3	27730326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B36
typical_cds_rare	Chr3	27730332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	C36,C59,C78
typical_cds_rare	Chr3	27730358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B108,B82,C36
typical_cds_rare	Chr3	27730368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C18
typical_cds_rare	Chr3	27730384	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	A13,B133,B4,B46
typical_cds_rare	Chr3	27730391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B12,B55,C32,C68,C8
typical_cds_rare	Chr3	27730409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	A2,B90
typical_cds_rare	Chr3	27730410	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	A19,B128,C40,C49
typical_cds_rare	Chr3	27730418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C37
typical_cds_rare	Chr3	27730428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B69,B79,C8
typical_cds_rare	Chr3	27730433	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B121,B29,B54
lof_cds	Chr3	27730448	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C65
typical_cds_rare	Chr3	27730448	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C65
typical_cds_rare	Chr3	27730450	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B110,B2,B20,B99,C60
typical_cds_rare	Chr3	27730457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B108,B22
typical_cds_rare	Chr3	27730473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B98
typical_cds_rare	Chr3	27730491	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B16,B78,C14,C48,C67
lof_cds	Chr3	27730501	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	35	A20,A22,B109,B11,B110,B117,B122,B130,B132,B136,B138,B30,B32,B48,B57,B58,B62,B64,B65,B67,B68,B75,B83,B92,B98,C19,C24,C42,C62,C63,C64,C74,C84,C87,D5
typical_cds_rare	Chr3	27730527	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B108,B125,B22,B92,C87
typical_cds_rare	Chr3	27730536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B54,C16
typical_cds_rare	Chr3	27730538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	A18,C25,C30
typical_cds_rare	Chr3	27730542	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B101,B25
typical_cds_rare	Chr3	27730543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	B68,B78,B79,B90
typical_cds_rare	Chr3	27730622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B118,D10
typical_cds_rare	Chr3	27730625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	C27
typical_cds_rare	Chr3	27730626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	B3,B58,C26,C52
typical_cds_rare	Chr3	27730637	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	B74,C69
typical_cds_rare	Chr3	27730655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B21,B36,B85,C6,D3
typical_cds_rare	Chr3	27730670	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	A6,B5,B7,C3
typical_cds_rare	Chr3	27730671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	B114,B42,B7,B88
typical_cds_rare	Chr3	27730679	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B114,B42,B88
lof_cds	Chr3	27730692	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B128,C22,C69,C70,D4
typical_cds_rare	Chr3	27730692	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B128,C22,C69,C70,D4
typical_cds_rare	Chr3	27730695	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	C14,C37,C38,C71
typical_cds_rare	Chr3	27730709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B77,C45,C87
typical_cds_rare	Chr3	27730739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	5	B18,C40,C43,C60,C85
typical_cds_rare	Chr3	27730748	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	4	A11,B121,C36,C56
typical_cds_rare	Chr3	27730769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C14,C5
typical_cds_rare	Chr3	27730770	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	3	B125,B92,C87
typical_cds_rare	Chr3	27730827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B120
typical_cds_rare	Chr3	27730840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	D11
typical_cds_rare	Chr3	27730858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	1	B49
typical_cds_rare	Chr3	27730861	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018610	SmilChr03G001945	131018610	rna-XM_057947325.1	2	C12,C23