source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	28723414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C20
typical_cds_rare	Chr3	28723423	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B104
typical_cds_rare	Chr3	28723429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	C31,C7,D11
lof_cds	Chr3	28723432	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	13	A22,B1,B113,B119,B35,B49,B51,B91,B94,B98,C38,C49,C70
typical_cds_rare	Chr3	28723455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B104,B67
typical_cds_rare	Chr3	28723473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B104
typical_cds_rare	Chr3	28723482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B104
typical_cds_rare	Chr3	28723487	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B104
typical_cds_rare	Chr3	28723496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B33,B71
typical_cds_rare	Chr3	28723508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B82
lof_cds	Chr3	28723520	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	58	A11,A18,A22,A23,A24,A7,A8,A9,B100,B105,B112,B113,B121,B125,B132,B134,B135,B137,B23,B38,B39,B45,B47,B48,B58,B62,B67,B83,B84,B87,B88,C14,C20,C25,C28,C3,C33,C34,C39,C4,C46,C47,C53,C56,C59,C60,C63,C65,C67,C72,C8,C80,C84,C86,D1,D3,D4,D9
typical_cds_rare	Chr3	28723532	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	A8,B126,B28,C6,D9
typical_cds_rare	Chr3	28723538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B139,B42,B5,B76,C50
typical_cds_rare	Chr3	28723551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B104
typical_cds_rare	Chr3	28723580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B114
typical_cds_rare	Chr3	28723588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B33
typical_cds_rare	Chr3	28723592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B123,B49,B79,C36
typical_cds_rare	Chr3	28723626	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	C31,C7,D11
typical_cds_rare	Chr3	28723648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C2
typical_cds_rare	Chr3	28723665	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	A15,B19,B61,C29
typical_cds_rare	Chr3	28723682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	C31,C7,D11
lof_cds	Chr3	28723691	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	33	A2,A24,A5,A7,B109,B110,B115,B139,B19,B32,B4,B41,B68,B79,B80,B86,B89,B93,B99,C12,C23,C3,C33,C4,C41,C42,C48,C51,C58,C61,C81,C86,C9
typical_cds_rare	Chr3	28723708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C1
typical_cds_rare	Chr3	28723722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B55,C1
typical_cds_rare	Chr3	28723723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	A21,B59,B63,C35
typical_cds_rare	Chr3	28723725	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B31,B74,C71,C76,C77
typical_cds_rare	Chr3	28723731	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B55,C1
typical_cds_rare	Chr3	28723814	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B66
typical_cds_rare	Chr3	28723819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B104,B26,B81,D11
typical_cds_rare	Chr3	28723833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B104,B26,B81,D11
typical_cds_rare	Chr3	28723839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B82,D2
typical_cds_rare	Chr3	28723842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B104,B26,B81,D10,D11
typical_cds_rare	Chr3	28723844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B119
typical_cds_rare	Chr3	28723909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B32,B95,C2,C68
typical_cds_rare	Chr3	28723925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B82,D2
lof_cds	Chr3	28723942	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	66	A10,A14,A15,A18,A20,A23,A8,B102,B103,B105,B109,B11,B114,B118,B120,B126,B129,B132,B135,B16,B17,B2,B20,B34,B4,B41,B47,B51,B52,B59,B61,B62,B64,B69,B72,B8,B80,B81,B82,B85,B86,B91,C12,C13,C14,C18,C29,C30,C32,C37,C4,C41,C42,C45,C46,C47,C49,C51,C60,C63,C68,C73,C80,C86,D11,D6
typical_cds_rare	Chr3	28723945	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B31,B74,C71,C76,C77
typical_cds_rare	Chr3	28723953	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	A22,B58
typical_cds_rare	Chr3	28723987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B128,C19,C32,D9
typical_cds_rare	Chr3	28723988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	A21,C35
typical_cds_rare	Chr3	28724001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	A9
lof_cds	Chr3	28724042	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	C63,C87
typical_cds_rare	Chr3	28724042	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	C63,C87
typical_cds_rare	Chr3	28724059	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C37
typical_cds_rare	Chr3	28724072	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B22
typical_cds_rare	Chr3	28724083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B11,B13
typical_cds_rare	Chr3	28724086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B6,C60
lof_cds	Chr3	28724087	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	10	A13,B102,B16,B3,B37,B53,B90,B92,C23,C24
typical_cds_rare	Chr3	28724112	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	A21,C38
typical_cds_rare	Chr3	28724113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B55,C7,D11
typical_cds_rare	Chr3	28724138	CA	*	INDEL	1bp_deletion	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	A20,B118,C54,C69,C75
typical_cds_rare	Chr3	28724254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B1,B135,B7
typical_cds_rare	Chr3	28724255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	A14,A24,B28,B95,D6
lof_cds	Chr3	28724261	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	9	A13,B100,B14,B25,B35,B68,B73,C11,C19
typical_cds_rare	Chr3	28724296	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C22
typical_cds_rare	Chr3	28724313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B114
typical_cds_rare	Chr3	28724317	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B104,B81
typical_cds_rare	Chr3	28724332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B108,B53,B62,B76,C67
typical_cds_rare	Chr3	28724338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B5,C62,C78
typical_cds_rare	Chr3	28724354	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B44
lof_cds	Chr3	28724355	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	8	A3,B137,B42,B60,B77,B97,C15,C45
typical_cds_rare	Chr3	28724369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	5	B137,B60,B77,B97,C45
typical_cds_rare	Chr3	28724373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B76,C67
typical_cds_rare	Chr3	28724395	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B42,B77
typical_cds_rare	Chr3	28724398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B29,C12,C30
typical_cds_rare	Chr3	28724412	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	B11,B123
typical_cds_rare	Chr3	28724415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B123,B49,C31
typical_cds_rare	Chr3	28724442	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C31
typical_cds_rare	Chr3	28724476	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B19,B59,C12,C34
typical_cds_rare	Chr3	28724495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	D7
typical_cds_rare	Chr3	28724512	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B140
typical_cds_rare	Chr3	28724533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	2	C60,C82
typical_cds_rare	Chr3	28724553	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	C23,C52,C64,D11
typical_cds_rare	Chr3	28724563	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B1,B102,C15
typical_cds_rare	Chr3	28724565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	4	B107,B48,B91,C24
typical_cds_rare	Chr3	28724581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C57
typical_cds_rare	Chr3	28724605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	D11
lof_cds	Chr3	28724626	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B73
typical_cds_rare	Chr3	28724626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B73
typical_cds_rare	Chr3	28724641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	A15
typical_cds_rare	Chr3	28724643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B79,C31,D11
typical_cds_rare	Chr3	28724653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C29
typical_cds_rare	Chr3	28724681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	B140
typical_cds_rare	Chr3	28724691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	1	C35
lof_cds	Chr3	28731462	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B73,C47,C86
typical_cds_rare	Chr3	28731462	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC131018623	SmilChr03G001979	131018623	rna-XM_057947338.1	3	B73,C47,C86