source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	33500507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	5	A3,B110,B32,B73,D2
typical_cds_rare	Chr3	33500522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	A22,B58,B64
typical_cds_rare	Chr3	33500536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B78
typical_cds_rare	Chr3	33500565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B15,B26,C1,D10
typical_cds_rare	Chr3	33500594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	2	B71,C70
lof_cds	Chr3	33500596	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	22	A3,B1,B118,B123,B137,B138,B16,B24,B38,B39,B47,B55,B57,B98,C19,C2,C25,C33,C4,C5,C74,D4
lof_cds	Chr3	33500598	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	200	A1,A10,A13,A14,A15,A16,A18,A2,A20,A22,A24,A3,A4,A5,A6,A8,A9,B1,B10,B102,B103,B104,B105,B108,B11,B110,B111,B112,B113,B114,B115,B117,B118,B121,B123,B126,B127,B129,B13,B130,B132,B133,B135,B137,B138,B139,B14,B140,B15,B16,B17,B19,B2,B20,B21,B23,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B36,B37,B38,B39,B40,B41,B42,B43,B44,B46,B47,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B62,B64,B65,B66,B67,B68,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B8,B80,B81,B82,B83,B84,B87,B88,B89,B90,B91,B92,B94,B96,B98,B99,C1,C10,C12,C13,C14,C16,C17,C18,C19,C2,C20,C21,C22,C23,C25,C26,C27,C28,C29,C30,C31,C32,C33,C34,C35,C37,C38,C39,C4,C40,C41,C43,C44,C45,C46,C48,C5,C50,C51,C52,C53,C54,C55,C56,C58,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C7,C70,C71,C72,C74,C75,C76,C77,C80,C81,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D4,D6,D8
lof_cds	Chr3	33500602	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B108,B33,C85
typical_cds_rare	Chr3	33500602	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B108,B33,C85
typical_cds_rare	Chr3	33500611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	5	B133,B42,B43,B90,B92
typical_cds_rare	Chr3	33500655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	2	B58,C31
typical_cds_rare	Chr3	33500676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C14
lof_cds	Chr3	33500749	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	115	A10,A13,A15,A20,A22,A24,A3,A5,A6,A8,A9,B105,B108,B11,B110,B111,B113,B114,B115,B118,B13,B130,B132,B133,B135,B137,B14,B140,B16,B2,B20,B23,B27,B28,B32,B33,B36,B37,B42,B43,B46,B5,B53,B54,B57,B59,B62,B64,B65,B67,B68,B70,B72,B75,B76,B77,B78,B82,B84,B87,B89,B90,B91,B92,B94,C1,C10,C13,C14,C16,C18,C19,C2,C20,C21,C22,C23,C25,C27,C28,C30,C32,C33,C34,C35,C37,C39,C4,C40,C45,C46,C5,C50,C51,C52,C54,C55,C56,C61,C62,C65,C68,C7,C71,C72,C74,C75,C80,C81,C82,C83,C84,D2,D3,D8
typical_cds_rare	Chr3	33500814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	5	B41,B71,B78,B89,C70
lof_cds	Chr3	33500851	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	12	A14,A19,A20,B10,B128,B50,B79,C22,C45,C46,C56,C86
typical_cds_rare	Chr3	33500854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C28
typical_cds_rare	Chr3	33500885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B108
typical_cds_rare	Chr3	33500909	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	A4,B113,B73,C47
lof_cds	Chr3	33500938	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	10	A19,A20,B10,B79,B94,C22,C45,C46,C79,C86
typical_cds_rare	Chr3	33500969	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B58
typical_cds_rare	Chr3	33501018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C14
typical_cds_rare	Chr3	33501020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B104,C26,C43,C46
typical_cds_rare	Chr3	33501021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C69
typical_cds_rare	Chr3	33501024	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B69,C38,D6
typical_cds_rare	Chr3	33501076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B91
typical_cds_rare	Chr3	33501101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B139,B73,C1,C78
typical_cds_rare	Chr3	33501109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B104,C26,C43,C46
typical_cds_rare	Chr3	33501125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B104,C26,C43,C46
lof_cds	Chr3	33501136	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	114	A1,A10,A11,A13,A16,A18,A19,A2,A23,A25,B100,B101,B106,B110,B114,B118,B119,B12,B121,B122,B123,B124,B125,B126,B13,B131,B135,B139,B16,B17,B20,B22,B25,B27,B29,B3,B30,B34,B4,B46,B49,B51,B52,B53,B56,B58,B59,B6,B62,B63,B65,B66,B68,B69,B7,B71,B73,B74,B76,B79,B83,B86,B87,B89,B9,B91,B93,B94,B95,B96,B97,B98,B99,C1,C11,C13,C15,C16,C17,C19,C23,C24,C28,C29,C30,C35,C36,C37,C38,C40,C41,C42,C44,C49,C56,C58,C61,C62,C64,C66,C7,C72,C73,C74,C76,C78,C8,C81,C83,C85,C87,D5,D6,D9
lof_cds	Chr3	33501139	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	75	A1,A10,A11,A13,A2,B100,B101,B106,B110,B114,B118,B119,B12,B124,B126,B13,B135,B16,B17,B20,B25,B27,B34,B49,B51,B52,B53,B56,B58,B6,B62,B65,B66,B68,B69,B7,B71,B74,B79,B86,B87,B89,B91,B93,B94,B95,B96,B98,B99,C1,C13,C19,C23,C24,C29,C33,C36,C37,C38,C39,C40,C41,C42,C44,C49,C61,C64,C66,C8,C81,C83,C87,D5,D6,D9
typical_cds_rare	Chr3	33501141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	A8
lof_cds	Chr3	33501157	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	34	A24,A3,A6,B102,B108,B11,B110,B138,B140,B2,B21,B23,B42,B43,B47,B5,B55,B56,B64,B71,B75,B78,B82,B89,B98,C16,C26,C48,C50,C52,C62,C81,C82,C85
typical_cds_rare	Chr3	33501164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B118,B16,B24,C19
lof_cds	Chr3	33501168	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B69,B91,C38,D6
typical_cds_rare	Chr3	33501168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B69,B91,C38,D6
typical_cds_rare	Chr3	33501184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B139,B73,B74,C78
lof_cds	Chr3	33501193	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	9	A19,B122,B131,B22,B63,B79,B83,C58,C85
typical_cds_rare	Chr3	33501194	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B110,B118,B24,C19
lof_cds	Chr3	33501202	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	14	A10,B20,B52,B53,B55,B62,B66,B88,C40,C44,C64,C66,C77,D2
typical_cds_rare	Chr3	33501226	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	C4,C83,D10
lof_cds	Chr3	33501239	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B101
typical_cds_rare	Chr3	33501239	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B101
typical_cds_rare	Chr3	33501284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B125,B51,C41
lof_cds	Chr3	33501295	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	88	A14,A16,A22,A23,A25,A5,A6,A7,A8,B101,B102,B103,B107,B109,B117,B119,B127,B128,B131,B134,B136,B137,B138,B16,B18,B25,B26,B29,B3,B32,B35,B37,B40,B41,B44,B45,B48,B5,B50,B54,B6,B60,B61,B62,B69,B70,B8,B80,B81,B83,B84,B85,B95,C11,C14,C15,C2,C22,C23,C25,C26,C27,C31,C34,C37,C38,C43,C46,C47,C49,C50,C51,C52,C55,C57,C60,C61,C67,C69,C70,C71,C75,C76,C79,C83,D2,D4,D9
lof_cds	Chr3	33501299	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	87	A14,A16,A22,A23,A25,A5,A6,A7,A8,B101,B102,B103,B107,B109,B117,B119,B127,B128,B131,B134,B136,B137,B138,B16,B18,B25,B26,B29,B3,B32,B35,B37,B40,B41,B44,B45,B48,B5,B50,B6,B60,B61,B62,B69,B70,B8,B80,B81,B83,B84,B85,B95,C11,C14,C15,C2,C22,C23,C25,C26,C27,C31,C34,C37,C38,C43,C46,C47,C49,C50,C51,C52,C55,C57,C60,C61,C67,C69,C70,C71,C75,C76,C79,C83,D2,D4,D9
typical_cds_rare	Chr3	33501304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	2	B68,D9
typical_cds_rare	Chr3	33501318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B78
typical_cds_rare	Chr3	33501326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	5	B15,B26,C1,D10,D11
typical_cds_rare	Chr3	33501368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B16,C11,C60,C69
typical_cds_rare	Chr3	33501401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	4	B108,B33,C23,C42
lof_cds	Chr3	33501491	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	8	A4,B102,B113,B139,B73,B74,C78,D11
typical_cds_rare	Chr3	33501513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B136,C1,C73
typical_cds_rare	Chr3	33501515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	D10
typical_cds_rare	Chr3	33501526	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B4
typical_cds_rare	Chr3	33501528	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	A8
lof_cds	Chr3	33501534	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B71,B89,C70
typical_cds_rare	Chr3	33501534	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B71,B89,C70
lof_cds	Chr3	33501567	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	24	A14,A16,A18,A25,A5,A7,B123,B130,B136,B138,B26,B32,B40,B46,B63,B73,B84,C11,C16,C26,C37,C69,C73,C84
typical_cds_rare	Chr3	33501604	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C23
typical_cds_rare	Chr3	33501613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	C23
typical_cds_rare	Chr3	33501616	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	2	A14,B50
typical_cds_rare	Chr3	33501622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B104,C26,C43
typical_cds_rare	Chr3	33501623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B68
typical_cds_rare	Chr3	33501624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B17
typical_cds_rare	Chr3	33501628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	1	B15
typical_cds_rare	Chr3	33501631	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	3	B22,B63,C85
typical_cds_rare	Chr3	33501677	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018680	SmilChr03G002154	131018680	rna-XM_057947393.1	5	B19,B47,B72,B82,B98