source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	34901957	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	29	B103,B119,B128,B13,B133,B18,B35,B6,B70,B8,B81,B85,B87,C10,C22,C27,C31,C39,C41,C47,C49,C52,C55,C57,C67,C69,C70,D4,D8
lof_cds	Chr3	34901976	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	66	A1,A10,A14,A15,A2,A3,A4,A5,A6,A9,B10,B102,B117,B124,B127,B13,B130,B132,B136,B139,B15,B16,B20,B23,B29,B3,B30,B31,B34,B4,B41,B44,B48,B55,B56,B70,B71,B72,B73,B77,B84,B85,B88,B89,B9,B96,C15,C24,C29,C3,C39,C45,C49,C52,C54,C57,C59,C70,C71,C81,C86,C9,D2,D4,D8,D9
lof_cds	Chr3	34901986	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	7	A22,A9,B22,C16,C62,C71,C79
lof_cds	Chr3	34901990	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	7	A22,A9,B22,C16,C62,C71,C79
lof_cds	Chr3	34902001	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	C62
typical_cds_rare	Chr3	34902001	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	C62
typical_cds_rare	Chr3	34902014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B88
typical_cds_rare	Chr3	34902066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	C82
typical_cds_rare	Chr3	34902119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B15,C15
typical_cds_rare	Chr3	34902150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
typical_cds_rare	Chr3	34902172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
typical_cds_rare	Chr3	34902175	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B130,D9
typical_cds_rare	Chr3	34902232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	5	B109,B33,B64,B93,C21
lof_cds	Chr3	34902234	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	3	B38,B39,B78
typical_cds_rare	Chr3	34902234	C	CCG	INDEL	2bp_insertion	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	3	B38,B39,B78
lof_cds	Chr3	34902240	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	35	A10,A15,A20,A25,A8,B109,B118,B127,B134,B22,B33,B44,B47,B50,B53,B64,B71,B75,B76,B77,B81,B84,B9,B93,B94,C11,C16,C21,C42,C56,C62,C69,C77,C78,C79
lof_cds	Chr3	34902242	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	14	B112,B13,B29,B3,B31,B41,B71,B89,C3,C52,C70,C76,C86,D8
typical_cds_rare	Chr3	34902279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B127,B64
lof_cds	Chr3	34902282	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	40	A10,A15,A20,A22,A25,A8,B118,B127,B134,B22,B38,B39,B44,B47,B49,B50,B53,B59,B64,B71,B75,B76,B77,B78,B81,B84,B9,B93,B94,C11,C16,C42,C56,C58,C62,C69,C71,C77,C78,C79
lof_cds	Chr3	34902286	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	40	A10,A15,A20,A22,A25,A8,B118,B127,B134,B22,B38,B39,B44,B47,B49,B50,B53,B59,B64,B71,B75,B76,B77,B78,B81,B84,B9,B93,B94,C11,C16,C42,C56,C58,C62,C69,C71,C77,C78,C79
lof_cds	Chr3	34902291	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	16	A25,B109,B11,B113,B28,B3,B31,B33,B62,B93,C12,C21,C29,C63,C71,C83
lof_cds	Chr3	34902309	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	61	A13,A16,A2,A3,A9,B10,B100,B11,B110,B113,B117,B118,B119,B121,B128,B134,B137,B138,B25,B29,B31,B4,B40,B45,B47,B55,B56,B6,B60,B7,B72,B73,B77,B8,B80,B83,B86,B94,B95,B96,B98,C1,C12,C20,C23,C26,C3,C30,C34,C38,C44,C47,C5,C56,C58,C59,C67,C72,C78,D2,D8
lof_cds	Chr3	34902318	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	C85
typical_cds_rare	Chr3	34902318	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	C85
typical_cds_rare	Chr3	34902323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B130,D9
lof_cds	Chr3	34902329	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	8	A15,B71,B84,B93,B94,C56,C62,C77
lof_cds	Chr3	34902332	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	10	A15,B110,B71,B84,B93,B94,C56,C62,C77,C85
typical_cds_rare	Chr3	34902358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B110,C85
lof_cds	Chr3	34902382	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	14	B112,B13,B29,B3,B31,B41,B71,B89,C3,C52,C70,C76,C86,D2
typical_cds_rare	Chr3	34902387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B110,C85
lof_cds	Chr3	34902401	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
typical_cds_rare	Chr3	34902401	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
lof_cds	Chr3	34902422	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	4	A2,A8,C58,C78
typical_cds_rare	Chr3	34902422	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	4	A2,A8,C58,C78
typical_cds_rare	Chr3	34902529	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
typical_cds_rare	Chr3	34902542	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B15,C15
typical_cds_rare	Chr3	34902545	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	3	B10,B15,C15
typical_cds_rare	Chr3	34902565	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B107,B140
typical_cds_rare	Chr3	34902579	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B1
lof_cds	Chr3	34902620	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	6	B82,B83,C10,C15,C5,C84
lof_cds	Chr3	34902629	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	11	A10,A14,A5,A6,A9,B34,B56,B84,C45,C49,C54
typical_cds_rare	Chr3	34902644	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	4	B38,B49,B64,C16
typical_cds_rare	Chr3	34902658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B40
typical_cds_rare	Chr3	34902707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B64,B93
typical_cds_rare	Chr3	34902715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	2	B15,C15
typical_cds_rare	Chr3	34902819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B117
typical_cds_rare	Chr3	34902820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016440	SmilChr03G002215	131016440	rna-XM_057945132.1	1	B89