source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	37977989	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	18	A10,A3,B1,B10,B18,B29,B31,B48,B83,B91,C11,C35,C46,C62,C65,C69,C76,C85
typical_cds_rare	Chr3	37978023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B97,C1
typical_cds_rare	Chr3	37978032	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	A9
lof_cds	Chr3	37978055	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	29	B105,B109,B112,B12,B129,B15,B19,B31,B42,B43,B55,B78,B83,B9,B90,B92,C11,C18,C2,C27,C35,C48,C59,C63,C64,C66,C69,C79,C9
lof_cds	Chr3	37978061	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	7	B114,B25,B68,B88,D2,D3,D9
typical_cds_rare	Chr3	37978066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	B64,C39,C6
lof_cds	Chr3	37978067	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B140
typical_cds_rare	Chr3	37978067	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B140
lof_cds	Chr3	37978097	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B32,C64
typical_cds_rare	Chr3	37978097	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B32,C64
typical_cds_rare	Chr3	37978104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B140,D10
lof_cds	Chr3	37978120	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	12	A19,A25,A6,B100,B123,B36,B39,B96,C10,C44,C5,C9
lof_cds	Chr3	37978121	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	13	A19,A25,A6,B100,B123,B36,B39,B86,B96,C10,C44,C5,C9
typical_cds_rare	Chr3	37978137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B100
lof_cds	Chr3	37978148	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	20	A19,A25,A6,B100,B123,B124,B128,B139,B2,B24,B55,B57,B82,B96,C10,C44,C5,C59,D1,D10
typical_cds_rare	Chr3	37978153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	A13,B112,C21
lof_cds	Chr3	37978165	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	21	A18,A20,A9,B10,B106,B114,B16,B29,B3,B34,B40,B42,B43,B47,B82,C35,C44,C64,C66,D11,D8
typical_cds_rare	Chr3	37978167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B94
lof_cds	Chr3	37978196	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	22	A10,A14,A4,A7,B114,B115,B125,B127,B130,B134,B36,B43,B45,B48,B76,C20,C37,C51,C73,C81,D5,D8
typical_cds_rare	Chr3	37978217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	5	B138,B95,B98,C84,D2
typical_cds_rare	Chr3	37978400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	C1
typical_cds_rare	Chr3	37978434	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	5	B124,B8,B88,C22,C67
typical_cds_rare	Chr3	37978469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B104
typical_cds_rare	Chr3	37978486	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B124,B88
lof_cds	Chr3	37978513	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	195	A1,A10,A13,A14,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A7,A8,B1,B10,B100,B101,B102,B103,B104,B106,B107,B109,B110,B111,B114,B115,B117,B119,B12,B120,B121,B122,B123,B124,B125,B128,B13,B130,B131,B134,B135,B137,B138,B139,B14,B140,B16,B17,B18,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B35,B36,B38,B39,B4,B40,B41,B45,B46,B47,B49,B5,B50,B51,B53,B54,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B68,B69,B7,B70,B71,B72,B73,B74,B75,B77,B78,B79,B8,B81,B82,B84,B85,B86,B87,B88,B89,B9,B91,B94,B97,B99,C1,C10,C12,C13,C15,C16,C17,C19,C22,C24,C26,C27,C28,C29,C3,C30,C31,C33,C34,C36,C37,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C5,C50,C51,C52,C53,C54,C56,C57,C58,C6,C60,C61,C62,C64,C7,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,D1,D10,D11,D2,D3,D5,D6,D7,D8,D9
lof_cds	Chr3	37978523	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	7	A13,A16,B112,B131,B31,C17,C21
typical_cds_rare	Chr3	37978529	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B104,B140
typical_cds_rare	Chr3	37978530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	B50,B60,B72
typical_cds_rare	Chr3	37978551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	D10
typical_cds_rare	Chr3	37978561	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B130,C80
lof_cds	Chr3	37978579	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	C83
typical_cds_rare	Chr3	37978579	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	C83
lof_cds	Chr3	37978581	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	5	A2,B37,B38,C31,C75
typical_cds_rare	Chr3	37978581	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	5	A2,B37,B38,C31,C75
lof_cds	Chr3	37978636	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	71	A10,A14,A15,A8,B102,B105,B106,B11,B113,B114,B117,B119,B122,B123,B125,B126,B132,B14,B15,B17,B18,B19,B20,B34,B40,B43,B44,B45,B46,B49,B51,B56,B58,B64,B80,B87,B91,B99,C1,C10,C12,C15,C20,C25,C26,C27,C33,C38,C41,C52,C59,C60,C63,C64,C65,C66,C67,C7,C71,C72,C73,C76,C81,C82,C87,C9,D3,D4,D5,D7,D8
lof_cds	Chr3	37978637	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	84	A10,A16,A18,A2,A22,A25,A4,A5,B1,B100,B101,B107,B110,B119,B12,B120,B121,B122,B124,B130,B131,B135,B136,B17,B22,B23,B26,B27,B35,B46,B49,B5,B50,B53,B54,B57,B58,B59,B6,B60,B63,B68,B69,B7,B72,B73,B75,B78,B79,B8,B82,B83,B84,B85,B86,B88,B96,B97,B99,C1,C13,C16,C24,C26,C28,C3,C34,C37,C4,C40,C42,C48,C52,C54,C57,C58,C62,C72,C8,C84,C85,C86,D5,D6
typical_cds_rare	Chr3	37978638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	B33,B80,B99
typical_cds_rare	Chr3	37978652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	A18,C6
typical_cds_rare	Chr3	37978667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	C80
typical_cds_rare	Chr3	37978707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	B124,B88,C22
typical_cds_rare	Chr3	37978732	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	B124,B88,C22
lof_cds	Chr3	37978766	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	4	A14,B102,B43,C38
typical_cds_rare	Chr3	37978766	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	4	A14,B102,B43,C38
typical_cds_rare	Chr3	37978772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B98,C68
lof_cds	Chr3	37978778	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	111	A1,A10,A11,A13,A14,A15,A19,A23,A7,A8,A9,B10,B100,B102,B105,B106,B11,B113,B114,B117,B119,B121,B122,B125,B126,B127,B13,B132,B134,B14,B15,B17,B18,B19,B20,B21,B3,B30,B32,B33,B34,B36,B4,B40,B43,B44,B45,B46,B48,B49,B50,B56,B58,B63,B64,B75,B77,B78,B79,B84,B86,B87,B89,B9,B91,B92,B95,C10,C12,C15,C16,C19,C20,C23,C26,C27,C29,C33,C34,C35,C38,C39,C4,C41,C46,C47,C51,C52,C56,C57,C59,C60,C63,C64,C65,C66,C67,C7,C71,C72,C73,C81,C82,C83,C87,C9,D3,D4,D5,D7,D8
lof_cds	Chr3	37978781	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	111	A1,A10,A11,A13,A14,A15,A19,A23,A7,A8,A9,B10,B100,B102,B105,B106,B11,B113,B114,B117,B119,B121,B125,B126,B127,B13,B132,B134,B14,B15,B17,B18,B19,B20,B21,B3,B30,B32,B33,B34,B36,B4,B40,B43,B44,B45,B46,B48,B49,B50,B56,B58,B63,B64,B75,B77,B78,B79,B84,B86,B87,B89,B9,B91,B92,B95,C10,C12,C15,C16,C19,C20,C23,C26,C27,C28,C29,C33,C34,C35,C38,C39,C4,C41,C46,C47,C51,C52,C56,C57,C59,C60,C63,C64,C65,C66,C67,C7,C71,C72,C73,C81,C82,C83,C87,C9,D3,D4,D5,D7,D8
typical_cds_rare	Chr3	37978790	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	4	B101,B54,B86,B98
typical_cds_rare	Chr3	37978846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	3	A14,B102,B43
typical_cds_rare	Chr3	37978850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B104,B140
lof_cds	Chr3	37978856	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	215	A1,A10,A11,A13,A15,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A6,A8,A9,B1,B100,B101,B104,B105,B106,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B122,B123,B124,B125,B126,B127,B128,B129,B130,B131,B132,B133,B135,B136,B137,B138,B140,B15,B16,B17,B18,B2,B20,B21,B22,B24,B25,B26,B29,B30,B31,B32,B33,B34,B35,B36,B38,B39,B4,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B51,B52,B53,B54,B55,B56,B59,B6,B60,B61,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B74,B75,B76,B77,B78,B79,B80,B81,B82,B83,B84,B85,B87,B88,B9,B90,B91,B92,B93,B94,B95,B96,B98,B99,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C69,C7,C70,C71,C72,C74,C75,C78,C79,C80,C81,C82,C83,C84,C85,C86,C9,D1,D11,D2,D4,D6,D7,D8,D9
typical_cds_rare	Chr3	37978865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B140
typical_cds_rare	Chr3	37978870	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B4,C80
lof_cds	Chr3	37978901	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	7	B11,B125,B127,B64,C3,C54,C83
lof_cds	Chr3	37978904	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	7	B11,B125,B127,B64,C3,C54,C83
lof_cds	Chr3	37978927	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B64,C54
typical_cds_rare	Chr3	37978927	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B64,C54
typical_cds_rare	Chr3	37978928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	4	B11,B127,C3,C83
typical_cds_rare	Chr3	37978961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	C22
typical_cds_rare	Chr3	37979005	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B104
lof_cds	Chr3	37979021	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B75
typical_cds_rare	Chr3	37979021	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B75
typical_cds_rare	Chr3	37979035	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	4	B11,B129,B131,C61
lof_cds	Chr3	37979036	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B66,C5
typical_cds_rare	Chr3	37979036	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B66,C5
typical_cds_rare	Chr3	37979043	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	2	B131,B99
typical_cds_rare	Chr3	37979089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	1	B99
typical_cds_rare	Chr3	37979101	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018757	SmilChr03G002396	131018757	rna-XM_057947461.1	5	A20,A8,C1,C13,C87