source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	38902587	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	B114,B58,B97,C64
typical_cds_rare	Chr3	38903004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	3	B125,B90,B92
typical_cds_rare	Chr3	38903015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	B136,B64,B91,C5,C82
typical_cds_rare	Chr3	38903019	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	B32,B73,C31,C62,C75
typical_cds_rare	Chr3	38903040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	D10
lof_cds	Chr3	38903051	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	25	A25,B107,B109,B119,B122,B126,B36,B50,B59,B63,B77,B83,B94,C18,C29,C4,C5,C53,C54,C59,C6,C67,C86,C87,D4
typical_cds_rare	Chr3	38903077	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	A21,B105,B27,B75
typical_cds_rare	Chr3	38903099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B117,D1
lof_cds	Chr3	38903102	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	17	A1,A20,A24,B104,B110,B14,B27,B45,B51,B89,B97,C10,C17,C29,C60,C74,C87
typical_cds_rare	Chr3	38903121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C81
lof_cds	Chr3	38903150	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C64
typical_cds_rare	Chr3	38903150	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C64
lof_cds	Chr3	38903151	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B97
typical_cds_rare	Chr3	38903151	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B97
typical_cds_rare	Chr3	38903160	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B104
typical_cds_rare	Chr3	38903179	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	A2,C74
typical_cds_rare	Chr3	38903181	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B125,B92
lof_cds	Chr3	38903209	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	16	A13,A23,B100,B111,B13,B131,B132,B35,B41,B75,B86,C1,C11,C28,C76,D7
typical_cds_rare	Chr3	38903234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B47,D11
typical_cds_rare	Chr3	38903241	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	3	A11,B14,B20
typical_cds_rare	Chr3	38903298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B71
lof_cds	Chr3	38903337	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	16	A1,A20,A24,B14,B45,B65,B89,B97,C10,C17,C21,C29,C60,C70,C74,C87
lof_cds	Chr3	38903341	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	36	A11,A13,A14,A18,A2,A4,A6,B102,B110,B123,B130,B140,B16,B3,B33,B41,B63,B64,B66,B79,B8,B85,B99,C16,C17,C24,C33,C34,C4,C45,C52,C55,C79,C9,D1,D9
typical_cds_rare	Chr3	38903457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	D10
lof_cds	Chr3	38903471	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B5,B57
typical_cds_rare	Chr3	38903471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B5,B57
typical_cds_rare	Chr3	38903518	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B46
typical_cds_rare	Chr3	38903543	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	B109,C17,C48,D11
typical_cds_rare	Chr3	38903550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	B136,B58,B95,C27
lof_cds	Chr3	38903564	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	17	A19,B18,B23,B38,B41,B5,B65,B74,B77,B89,C19,C3,C37,C42,C54,C87,D11
typical_cds_rare	Chr3	38903573	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	A1,B131,B15,C11
lof_cds	Chr3	38903578	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	16	A19,B18,B23,B41,B5,B65,B74,B89,C19,C3,C37,C4,C42,C54,C87,D11
typical_cds_rare	Chr3	38903580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	A2,B115
lof_cds	Chr3	38903585	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B77
typical_cds_rare	Chr3	38903585	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B77
lof_cds	Chr3	38903587	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B77
typical_cds_rare	Chr3	38903587	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B77
typical_cds_rare	Chr3	38903597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C85
typical_cds_rare	Chr3	38903601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	A2,B115
lof_cds	Chr3	38903613	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	17	A19,B18,B23,B38,B41,B5,B58,B59,B65,B74,B89,C19,C3,C37,C54,C87,D11
typical_cds_rare	Chr3	38903617	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	B73,C46,C68,D10
lof_cds	Chr3	38903618	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	18	A19,B18,B23,B38,B41,B5,B58,B59,B65,B74,B89,C18,C19,C3,C37,C54,C87,D11
lof_cds	Chr3	38903619	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	19	A19,B18,B23,B38,B41,B42,B5,B58,B59,B65,B74,B89,C18,C19,C3,C37,C54,C87,D11
typical_cds_rare	Chr3	38903628	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	A21,B105,B132,B27,B75
lof_cds	Chr3	38903636	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	21	A19,B18,B23,B38,B41,B42,B5,B57,B58,B59,B65,B74,B89,C18,C19,C25,C3,C37,C54,C87,D11
lof_cds	Chr3	38903639	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	21	A19,B18,B23,B38,B41,B42,B5,B57,B58,B59,B65,B74,B89,C18,C19,C25,C3,C37,C54,C87,D11
typical_cds_rare	Chr3	38903643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	A2,C4
typical_cds_rare	Chr3	38903652	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	A2
typical_cds_rare	Chr3	38903657	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	3	A2,C31,C4
lof_cds	Chr3	38903673	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B105,B75
typical_cds_rare	Chr3	38903673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B105,B75
typical_cds_rare	Chr3	38903694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	B133,B136,B58,B95,C27
typical_cds_rare	Chr3	38903700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	C1,C17,C31,C4
typical_cds_rare	Chr3	38903727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	B107,B130,C31,C4,D11
typical_cds_rare	Chr3	38903742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B63,C78
typical_cds_rare	Chr3	38903773	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B15,C11
typical_cds_rare	Chr3	38903777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B104
typical_cds_rare	Chr3	38903808	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	5	C1,C17,C31,C4,C49
typical_cds_rare	Chr3	38903809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	A14,C23
lof_cds	Chr3	38903810	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C81
typical_cds_rare	Chr3	38903810	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	C81
typical_cds_rare	Chr3	38903839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B140
typical_cds_rare	Chr3	38903844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	1	B48
typical_cds_rare	Chr3	38903850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	C1,C31,C4,C49
typical_cds_rare	Chr3	38903860	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	3	A11,B2,B53
lof_cds	Chr3	38903879	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	25	A19,B132,B18,B38,B42,B5,B52,B57,B58,B59,B65,B74,B77,B89,C18,C19,C25,C3,C31,C37,C4,C42,C54,C74,C87
lof_cds	Chr3	38903882	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	24	A19,B132,B18,B38,B42,B5,B52,B57,B58,B59,B65,B74,B77,B89,C18,C19,C3,C31,C37,C4,C42,C54,C74,C87
typical_cds_rare	Chr3	38903885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	4	A16,B32,B75,C9
typical_cds_rare	Chr3	38903903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	3	B139,C31,C4
typical_cds_rare	Chr3	38903906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	C31,C4
lof_cds	Chr3	38903911	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B107,B35
typical_cds_rare	Chr3	38903911	T	TGG	INDEL	2bp_insertion	CDS_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	2	B107,B35
lof_cds	Chr3	38903912	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	66	A10,A16,A2,A22,A24,A25,A5,B10,B100,B105,B106,B118,B12,B126,B134,B137,B138,B140,B17,B2,B24,B26,B27,B32,B34,B38,B44,B46,B52,B59,B61,B64,B69,B71,B72,B74,B80,B84,B93,C11,C12,C17,C19,C22,C23,C24,C36,C38,C43,C45,C47,C49,C50,C53,C61,C62,C64,C67,C76,C78,C8,C85,C9,D2,D6,D9
lof_cds	Chr3	38903913	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	63	A11,A13,A2,A23,A25,A7,A8,A9,B100,B102,B109,B111,B121,B122,B123,B125,B128,B13,B131,B133,B136,B137,B18,B21,B24,B25,B26,B29,B31,B32,B34,B35,B41,B45,B5,B6,B7,B73,B75,B8,B85,B86,B88,B93,B94,B97,C11,C12,C15,C17,C27,C28,C41,C53,C61,C67,C69,C75,C76,C78,D2,D7,D8
lof_cds	Chr3	38903914	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	128	A1,A10,A11,A13,A15,A19,A20,A23,A24,A4,A6,A7,A8,A9,B1,B101,B102,B104,B109,B110,B111,B112,B115,B117,B121,B122,B123,B125,B128,B129,B13,B131,B132,B133,B135,B136,B14,B140,B18,B19,B20,B21,B24,B25,B29,B31,B32,B34,B38,B40,B41,B42,B43,B45,B47,B48,B5,B51,B53,B55,B56,B57,B58,B6,B62,B63,B65,B66,B7,B71,B73,B75,B77,B78,B79,B8,B82,B85,B86,B88,B89,B9,B90,B92,B94,B96,C11,C15,C16,C17,C18,C19,C20,C21,C27,C28,C29,C3,C34,C37,C41,C44,C45,C46,C53,C54,C56,C60,C65,C69,C7,C70,C72,C74,C75,C77,C79,C80,C81,C86,C87,D10,D2,D3,D4,D5,D7,D8
lof_cds	Chr3	38903918	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	100	A1,A11,A15,A16,A23,A24,A4,A5,A6,A7,A8,A9,B101,B103,B11,B111,B112,B117,B118,B124,B135,B138,B139,B14,B15,B19,B22,B23,B24,B26,B28,B30,B32,B37,B40,B48,B5,B50,B52,B53,B59,B60,B61,B62,B67,B68,B69,B7,B70,B71,B75,B76,B79,B80,B84,B86,B9,B90,B91,B96,B98,C11,C14,C15,C18,C19,C20,C25,C29,C30,C32,C40,C42,C43,C45,C48,C50,C51,C53,C55,C56,C57,C61,C64,C68,C69,C7,C70,C75,C76,C77,C78,C79,C82,C83,C84,D2,D4,D5,D9
lof_cds	Chr3	38903925	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131018782	SmilChr03G002455	131018782	rna-XM_057947488.1	18	B132,B18,B42,B5,B52,B58,B59,B65,B74,B77,B89,C19,C31,C37,C4,C54,C74,C87