source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	39982392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B94
typical_cds_rare	Chr3	39982439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B65,C49,D4
typical_cds_rare	Chr3	39982480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B65,C49,C74
typical_cds_rare	Chr3	39982481	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B20
typical_cds_rare	Chr3	39982488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B20
typical_cds_rare	Chr3	39982555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	C19
lof_cds	Chr3	39982633	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B13,B56,B69
typical_cds_rare	Chr3	39982633	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B13,B56,B69
typical_cds_rare	Chr3	39982685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	C47
lof_cds	Chr3	39985055	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	9	A20,B109,B125,B131,B40,B44,B53,C69,C78
lof_cds	Chr3	39985058	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	9	A20,B109,B125,B131,B40,B44,B53,C69,C78
typical_cds_rare	Chr3	39985113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B40
typical_cds_rare	Chr3	39985145	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B40
typical_cds_rare	Chr3	39985163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B131,B75,C57
typical_cds_rare	Chr3	39985210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B131,B75,C57
typical_cds_rare	Chr3	39985276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	A13,A4
typical_cds_rare	Chr3	39985295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	B108,B123,B88,C46,C62
typical_cds_rare	Chr3	39985424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B12,B32,C73
typical_cds_rare	Chr3	39985492	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
lof_cds	Chr3	39985528	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B104,B44,D1
typical_cds_rare	Chr3	39985528	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B104,B44,D1
lof_cds	Chr3	39985531	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B104,B44,D1
typical_cds_rare	Chr3	39985531	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B104,B44,D1
typical_cds_rare	Chr3	39985609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39985629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B109,B120,C41
typical_cds_rare	Chr3	39985630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	A19,C40
typical_cds_rare	Chr3	39985669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	B67,B7,C33
lof_cds	Chr3	39985714	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	64	A19,A2,A20,A24,A25,A4,A5,A7,A9,B10,B102,B103,B104,B121,B125,B126,B129,B130,B131,B16,B17,B25,B27,B37,B42,B43,B44,B46,B52,B53,B67,B68,B69,B7,B79,B80,B81,B82,B88,B90,B92,B95,C1,C11,C13,C15,C2,C21,C24,C28,C30,C33,C36,C42,C45,C47,C53,C55,C58,C78,C9,D1,D4,D5
lof_cds	Chr3	39985735	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	117	A11,A13,A15,A16,A19,A2,A21,A22,A23,A25,A4,A5,A7,A8,A9,B101,B103,B104,B105,B106,B107,B110,B111,B112,B114,B12,B122,B123,B132,B133,B134,B136,B14,B15,B23,B25,B33,B35,B36,B4,B41,B47,B48,B49,B5,B50,B53,B55,B56,B6,B60,B67,B69,B70,B71,B72,B73,B76,B77,B78,B79,B80,B84,B89,B9,B93,B95,B96,B98,C1,C11,C15,C19,C20,C29,C3,C30,C31,C32,C35,C36,C38,C39,C4,C40,C41,C42,C44,C45,C46,C50,C53,C54,C56,C57,C61,C62,C63,C65,C68,C69,C7,C70,C71,C72,C74,C83,C84,C86,C87,C9,D1,D10,D4,D6,D8,D9
typical_cds_rare	Chr3	39985836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	B7,C33
lof_cds	Chr3	39985865	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	69	A19,A2,A20,A24,A25,A4,A5,A7,B10,B100,B102,B103,B104,B11,B114,B121,B125,B126,B129,B130,B131,B16,B17,B27,B37,B42,B43,B44,B52,B53,B55,B62,B65,B69,B7,B79,B80,B81,B84,B88,B92,B95,B97,C1,C11,C13,C15,C2,C21,C24,C28,C30,C33,C35,C36,C42,C53,C55,C58,C59,C6,C69,C78,C85,C9,D1,D4,D5,D6
lof_cds	Chr3	39985866	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	66	A19,A2,A20,A24,A25,A4,A5,A7,B10,B100,B102,B103,B104,B11,B114,B121,B125,B126,B129,B131,B16,B17,B27,B37,B42,B43,B44,B52,B53,B62,B69,B7,B79,B80,B81,B84,B88,B92,B95,B97,C1,C11,C13,C15,C2,C21,C24,C28,C30,C33,C35,C36,C42,C53,C55,C58,C59,C6,C69,C78,C85,C9,D1,D4,D5,D6
typical_cds_rare	Chr3	39985917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C19,C6
typical_cds_rare	Chr3	39985931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	C42
typical_cds_rare	Chr3	39985947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C19,C6
lof_cds	Chr3	39986017	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	13	A2,B121,B27,B69,B7,B80,B90,B92,B97,C1,C6,C78,D5
lof_cds	Chr3	39986020	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	70	A2,A20,A24,A25,A5,A7,A9,B10,B100,B102,B103,B104,B109,B11,B121,B125,B126,B129,B131,B16,B17,B25,B27,B37,B42,B43,B44,B46,B52,B53,B62,B67,B68,B69,B7,B80,B81,B82,B84,B88,B90,B92,B95,B97,C11,C13,C15,C2,C21,C24,C25,C28,C30,C33,C34,C35,C36,C42,C45,C47,C55,C58,C59,C69,C85,C9,D1,D4,D5,D6
lof_cds	Chr3	39986057	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C1,C6
typical_cds_rare	Chr3	39986057	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C1,C6
lof_cds	Chr3	39986063	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	117	A11,A13,A15,A16,A19,A2,A21,A22,A23,A25,A4,A5,A7,A8,A9,B101,B103,B104,B105,B106,B107,B109,B110,B111,B112,B114,B12,B122,B123,B132,B133,B134,B136,B14,B15,B23,B25,B33,B35,B36,B4,B41,B47,B48,B49,B5,B50,B53,B55,B56,B6,B60,B67,B69,B71,B72,B73,B76,B77,B78,B79,B80,B84,B89,B9,B93,B95,B96,B98,C1,C11,C15,C19,C20,C29,C3,C30,C31,C32,C35,C36,C38,C39,C4,C40,C41,C42,C44,C45,C46,C50,C53,C54,C56,C57,C61,C62,C63,C65,C68,C69,C7,C70,C71,C72,C74,C83,C84,C86,C87,C9,D1,D10,D4,D6,D8,D9
typical_cds_rare	Chr3	39986091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	C1,C19,C6
lof_cds	Chr3	39986100	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39986100	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39986111	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	C1,C19,C6
typical_cds_rare	Chr3	39986121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	3	C1,C19,C6
typical_cds_rare	Chr3	39986156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
lof_cds	Chr3	39986192	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39986192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39986197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	A7,B126,B44,C30,C42
typical_cds_rare	Chr3	39986202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C1,C19
typical_cds_rare	Chr3	39986232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	C21,C29
typical_cds_rare	Chr3	39986233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B124
typical_cds_rare	Chr3	39986289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B132,C1,C19,C6
lof_cds	Chr3	39986300	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	B27,B44,B97,C42,C85
typical_cds_rare	Chr3	39986300	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	B27,B44,B97,C42,C85
lof_cds	Chr3	39986308	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	B27,B44,B97,C42,C85
typical_cds_rare	Chr3	39986308	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	5	B27,B44,B97,C42,C85
typical_cds_rare	Chr3	39986332	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B44,B97,C42,C85
typical_cds_rare	Chr3	39986348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	B44,C85
typical_cds_rare	Chr3	39986355	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B132,C1,C19,C6
typical_cds_rare	Chr3	39986371	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	D4
typical_cds_rare	Chr3	39986373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	B91,C71
lof_cds	Chr3	39986382	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B132,C1,C19,C6
typical_cds_rare	Chr3	39986382	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B132,C1,C19,C6
typical_cds_rare	Chr3	39986398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B44
lof_cds	Chr3	39986421	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	82	A13,A15,A16,A19,A21,A4,A5,A9,B101,B104,B105,B106,B109,B110,B111,B112,B114,B12,B122,B123,B133,B134,B136,B14,B15,B23,B35,B41,B48,B49,B50,B55,B56,B6,B60,B67,B69,B70,B71,B72,B73,B76,B77,B80,B84,B93,B95,B96,B98,C1,C19,C20,C29,C3,C30,C31,C32,C35,C36,C39,C4,C44,C45,C46,C50,C53,C61,C62,C63,C65,C68,C7,C70,C72,C74,C83,C84,D1,D10,D4,D6,D8
lof_cds	Chr3	39986423	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B72
typical_cds_rare	Chr3	39986423	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B72
typical_cds_rare	Chr3	39986612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
lof_cds	Chr3	39986629	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	A13,A4
typical_cds_rare	Chr3	39986629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	2	A13,A4
typical_cds_rare	Chr3	39987000	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
typical_cds_rare	Chr3	39987017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	4	B12,B32,C73,C86
lof_cds	Chr3	39987129	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B125
typical_cds_rare	Chr3	39987129	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131018795	SmilChr03G002512	131018795	rna-XM_057947505.1	1	B125