source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	40367093	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	14	A22,B11,B129,B131,B2,B57,C35,C37,C41,C48,C64,C66,C83,D8
lof_cds	Chr3	40367121	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	157	A1,A10,A11,A13,A15,A18,A19,A2,A23,A3,A4,A7,A8,A9,B1,B10,B101,B102,B103,B104,B107,B108,B111,B113,B115,B117,B118,B121,B123,B124,B125,B127,B128,B130,B132,B134,B135,B136,B137,B138,B139,B140,B16,B18,B19,B20,B21,B22,B23,B24,B26,B27,B29,B3,B30,B34,B35,B36,B37,B38,B39,B4,B40,B41,B44,B46,B48,B5,B50,B51,B52,B53,B54,B56,B59,B61,B62,B64,B68,B69,B7,B70,B71,B72,B74,B75,B78,B79,B8,B80,B81,B82,B84,B85,B86,B88,B9,B93,B95,B96,B98,C1,C12,C14,C15,C17,C18,C19,C2,C20,C23,C27,C28,C3,C30,C31,C35,C36,C37,C38,C39,C42,C43,C44,C45,C49,C5,C50,C51,C54,C55,C57,C58,C59,C6,C61,C62,C65,C66,C7,C71,C74,C75,C77,C79,C80,C81,C82,C84,C85,C86,C87,D1,D10,D11,D5,D6
lof_cds	Chr3	40367122	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	D9
typical_cds_rare	Chr3	40367122	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	D9
typical_cds_rare	Chr3	40367144	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B129,B2,B60
typical_cds_rare	Chr3	40367167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B135,B98,C14
typical_cds_rare	Chr3	40367180	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	C4
typical_cds_rare	Chr3	40367188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	B95,B98
typical_cds_rare	Chr3	40367190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	C4
typical_cds_rare	Chr3	40367195	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	4	B125,B48,C60,C73
typical_cds_rare	Chr3	40367199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	B135,B18,B2,B42,C14
typical_cds_rare	Chr3	40367201	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B94,B95,B98
typical_cds_rare	Chr3	40367207	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	4	B125,B48,C60,C73
typical_cds_rare	Chr3	40367221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	B122
typical_cds_rare	Chr3	40367223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	C8,C82
typical_cds_rare	Chr3	40367235	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	4	A11,B135,B42,C14
typical_cds_rare	Chr3	40367278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	C48,C72,D9
lof_cds	Chr3	40367281	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	C59
typical_cds_rare	Chr3	40367281	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	C59
typical_cds_rare	Chr3	40367282	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	C48,C72,D9
typical_cds_rare	Chr3	40367296	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	4	B122,B78,C4,C77
typical_cds_rare	Chr3	40367297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	A16,B33,C15,C31,C77
typical_cds_rare	Chr3	40367303	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	A16,B33
lof_cds	Chr3	40367308	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	122	A11,A14,A16,A19,A20,A21,A23,A25,A6,A7,A8,A9,B101,B105,B108,B112,B113,B117,B121,B122,B123,B125,B128,B129,B131,B135,B136,B138,B139,B14,B140,B18,B20,B22,B26,B3,B31,B32,B36,B41,B42,B43,B45,B46,B47,B49,B50,B52,B53,B54,B55,B56,B60,B61,B62,B63,B66,B67,B69,B71,B73,B76,B77,B80,B81,B82,B84,B86,B88,B9,B90,B91,B92,B94,B95,B96,C10,C11,C12,C15,C16,C17,C18,C19,C20,C22,C23,C24,C26,C28,C29,C3,C33,C34,C35,C39,C4,C40,C41,C43,C47,C49,C50,C55,C6,C61,C64,C65,C66,C70,C72,C74,C75,C76,C77,C80,C86,C87,D1,D2,D5,D7
lof_cds	Chr3	40367313	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	C48,C72,D9
typical_cds_rare	Chr3	40367313	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	C48,C72,D9
lof_cds	Chr3	40367319	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	B129,B91
typical_cds_rare	Chr3	40367319	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	B129,B91
typical_cds_rare	Chr3	40367329	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	B53,B66,B75,C33,C4
typical_cds_rare	Chr3	40367335	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	C4
typical_cds_rare	Chr3	40367345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	A16,B98
typical_cds_rare	Chr3	40367348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	A7,B135,B140
typical_cds_rare	Chr3	40367364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B34,C25,C77
lof_cds	Chr3	40367386	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	13	A6,B38,B39,B4,B46,B49,B5,B51,B79,C28,C49,C66,D7
typical_cds_rare	Chr3	40367391	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B122,B91,C4
typical_cds_rare	Chr3	40367400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	A16,B33,C23,C66,D11
typical_cds_rare	Chr3	40367404	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	A13,B121,C36,C65,C81
typical_cds_rare	Chr3	40367425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	D11
typical_cds_rare	Chr3	40367427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	B10,B102
typical_cds_rare	Chr3	40367436	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	3	B124,B2,C78
typical_cds_rare	Chr3	40367441	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	A2,B14,B31,C83,D10
lof_cds	Chr3	40367443	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	25	B100,B110,B119,B18,B25,B28,B41,B6,B87,C10,C25,C32,C38,C43,C46,C47,C5,C67,C68,C70,C74,C9,D4,D5,D8
typical_cds_rare	Chr3	40367471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	A2,B81,C14,C20,C42
typical_cds_rare	Chr3	40367492	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	2	B103,C1
typical_cds_rare	Chr3	40367510	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	5	B121,B27,B33,B53,C36
typical_cds_rare	Chr3	40367531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018799	SmilChr03G002530	131018799	rna-XM_057947508.1	1	B132