source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	43031973	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	13	B12,B40,B48,B49,B56,B60,B74,B96,C24,C29,C40,D1,D5
typical_cds_rare	Chr3	43031979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	B105,B37,B79,C12,C64
typical_cds_rare	Chr3	43031995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B117
typical_cds_rare	Chr3	43032034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B9
lof_cds	Chr3	43032038	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B22,B44
typical_cds_rare	Chr3	43032038	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B22,B44
typical_cds_rare	Chr3	43032064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B38,B39,C74
typical_cds_rare	Chr3	43032124	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B7,C60
typical_cds_rare	Chr3	43032126	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B49
typical_cds_rare	Chr3	43032129	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C14
lof_cds	Chr3	43032137	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	14	A1,A21,A22,A23,B119,B12,B137,B19,B80,B84,C21,C23,C54,C84
typical_cds_rare	Chr3	43032146	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	A10,A3,B66,C60
lof_cds	Chr3	43032155	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C26
typical_cds_rare	Chr3	43032155	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C26
typical_cds_rare	Chr3	43032175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B69
lof_cds	Chr3	43032191	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	32	A18,A24,B103,B109,B119,B124,B125,B128,B137,B138,B20,B3,B35,B38,B39,B57,B60,B78,B86,B88,B9,B91,C3,C35,C47,C5,C59,C61,C62,C86,D5,D9
typical_cds_rare	Chr3	43032209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B26
lof_cds	Chr3	43032212	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	A13,B139
typical_cds_rare	Chr3	43032212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	A13,B139
typical_cds_rare	Chr3	43032251	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C26
typical_cds_rare	Chr3	43032276	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B131,B40,C14
lof_cds	Chr3	43032293	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B20,C34,C63,D9
typical_cds_rare	Chr3	43032293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B20,C34,C63,D9
typical_cds_rare	Chr3	43032316	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B11,B33
typical_cds_rare	Chr3	43032321	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B38
typical_cds_rare	Chr3	43032326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	C72,D9
typical_cds_rare	Chr3	43032343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B124,B76
typical_cds_rare	Chr3	43032373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	C39,C67
lof_cds	Chr3	43032388	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B131,B40
typical_cds_rare	Chr3	43032388	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B131,B40
lof_cds	Chr3	43032416	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B123,C37
typical_cds_rare	Chr3	43032416	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B123,C37
typical_cds_rare	Chr3	43032443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B130,C19,C61,C83
typical_cds_rare	Chr3	43032452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B60,C35,C81
typical_cds_rare	Chr3	43032456	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	B138,B35,B88,B98,C12
typical_cds_rare	Chr3	43032470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B98
typical_cds_rare	Chr3	43032477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	C37,C55
typical_cds_rare	Chr3	43032500	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B94
typical_cds_rare	Chr3	43032508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B47
lof_cds	Chr3	43032521	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B16,B6,C39,C67
typical_cds_rare	Chr3	43032521	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B16,B6,C39,C67
lof_cds	Chr3	43032524	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	55	A23,A4,A6,B101,B107,B108,B109,B11,B112,B113,B119,B122,B136,B17,B2,B21,B25,B34,B39,B47,B49,B58,B6,B60,B61,B62,B70,B71,B72,B79,B82,B86,B90,B91,B92,C11,C12,C14,C18,C21,C3,C31,C46,C5,C53,C59,C63,C65,C67,C68,C69,C70,C71,D3,D8
lof_cds	Chr3	43032530	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	39	A23,B107,B108,B109,B11,B112,B113,B119,B122,B136,B17,B2,B21,B34,B47,B6,B60,B61,B62,B71,B72,B90,B91,B92,C11,C14,C18,C21,C3,C31,C46,C5,C59,C65,C67,C69,C7,C70,C71
lof_cds	Chr3	43032532	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	26	A6,B105,B113,B117,B127,B130,B15,B16,B26,B31,B37,B46,B53,B6,B83,C30,C32,C33,C39,C55,C56,C67,C68,C71,C75,C8
lof_cds	Chr3	43032536	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	39	A23,B107,B108,B109,B11,B112,B113,B119,B121,B122,B136,B17,B2,B21,B34,B47,B6,B60,B61,B62,B71,B72,B90,B92,C11,C14,C18,C21,C3,C31,C46,C5,C59,C65,C67,C69,C7,C70,C71
lof_cds	Chr3	43032538	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	15	A25,B104,B124,B13,B131,B24,B38,B44,B85,C15,C28,C44,C47,C6,C84
typical_cds_rare	Chr3	43032556	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B41
typical_cds_rare	Chr3	43032564	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	A10,C26,D11,D2
lof_cds	Chr3	43032566	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	39	A15,A16,A7,B1,B100,B102,B112,B127,B128,B130,B2,B34,B38,B49,B50,B55,B56,B59,B63,B69,B7,B73,B83,B85,C11,C14,C2,C32,C35,C4,C42,C49,C58,C62,C69,C7,C76,C78,C79
typical_cds_rare	Chr3	43032569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B53
typical_cds_rare	Chr3	43032609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B20,C26,C3
lof_cds	Chr3	43032629	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B38,B39,C74
typical_cds_rare	Chr3	43032629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B38,B39,C74
typical_cds_rare	Chr3	43032672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	C20,C33,C54
typical_cds_rare	Chr3	43032694	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B104,B127
typical_cds_rare	Chr3	43032697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C58
typical_cds_rare	Chr3	43032700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	C26
typical_cds_rare	Chr3	43032702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	C20,C33,C46,C54,D11
typical_cds_rare	Chr3	43032708	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B20,B71,C32,C63
typical_cds_rare	Chr3	43032734	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	B104,B88,C19,C61,C71
typical_cds_rare	Chr3	43032751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B38,C74
lof_cds	Chr3	43032761	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	10	B104,B132,B21,B27,B46,B88,B89,C1,C19,C61
typical_cds_rare	Chr3	43032773	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B104
typical_cds_rare	Chr3	43032818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	2	B13,B86
lof_cds	Chr3	43032839	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	103	A1,A10,A13,A14,A15,A25,A3,A5,A7,A9,B10,B103,B104,B106,B107,B109,B119,B126,B128,B13,B131,B132,B15,B17,B21,B22,B24,B25,B26,B27,B29,B30,B32,B39,B40,B42,B47,B48,B49,B53,B56,B57,B58,B60,B61,B62,B63,B65,B67,B7,B71,B77,B81,B82,B83,B86,B89,B9,B90,B91,B96,B97,B99,C1,C10,C11,C12,C16,C19,C21,C23,C26,C27,C3,C34,C35,C36,C39,C40,C42,C43,C44,C47,C51,C52,C53,C54,C55,C59,C63,C66,C67,C68,C7,C78,C79,C83,C84,C87,D1,D2,D4,D8
typical_cds_rare	Chr3	43032848	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	4	B16,C40,C44,C52
typical_cds_rare	Chr3	43032868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	A5,B137,B42,B43,D4
typical_cds_rare	Chr3	43032869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	1	B92
lof_cds	Chr3	43032873	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	B11,B20,C24,C26,C44
typical_cds_rare	Chr3	43032873	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	5	B11,B20,C24,C26,C44
typical_cds_rare	Chr3	43032895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015894	SmilChr03G002706	131015894	rna-XM_057944384.1,rna-XM_057944385.1	3	B57,B98,C25