source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	43119876	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	8	A13,B22,B54,B65,B70,C13,C30,C31
lof_cds	Chr3	43119883	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	7	A13,B54,B70,C13,C30,C31,C74
lof_cds	Chr3	43119887	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	7	A13,B54,B70,C13,C30,C31,C74
lof_cds	Chr3	43119920	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B70,C13,C31
typical_cds_rare	Chr3	43119920	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B70,C13,C31
lof_cds	Chr3	43119925	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	D11
typical_cds_rare	Chr3	43119925	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	D11
typical_cds_rare	Chr3	43119927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	A7,C78
typical_cds_rare	Chr3	43119935	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B132,B70,C13,C31
lof_cds	Chr3	43119944	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	16	A10,B140,B2,B39,B42,B46,B90,B91,B92,C1,C24,C32,C42,C6,C68,C79
typical_cds_rare	Chr3	43119975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B132,B70,C13,C31
typical_cds_rare	Chr3	43119990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B70,C13
lof_cds	Chr3	43120000	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B14,B31,C71
typical_cds_rare	Chr3	43120000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B14,B31,C71
lof_cds	Chr3	43120011	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	B75
typical_cds_rare	Chr3	43120011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	B75
typical_cds_rare	Chr3	43120022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B131,B27,B78,C51
typical_cds_rare	Chr3	43120044	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C30,C47
typical_cds_rare	Chr3	43120068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B125,C18,C87
lof_cds	Chr3	43120069	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B117,B129,B46,B93,C85
typical_cds_rare	Chr3	43120069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B117,B129,B46,B93,C85
typical_cds_rare	Chr3	43120101	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B127,C19,C82
typical_cds_rare	Chr3	43120102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B109,C28
lof_cds	Chr3	43120131	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	A6,C48,C55,D11,D6
typical_cds_rare	Chr3	43120131	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	A6,C48,C55,D11,D6
lof_cds	Chr3	43120134	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B41,B42,B70,C58
typical_cds_rare	Chr3	43120134	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B41,B42,B70,C58
typical_cds_rare	Chr3	43120136	TA	*	INDEL	1bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B131,B27,B78,C51
lof_cds	Chr3	43120157	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	30	A21,B1,B111,B120,B122,B13,B139,B28,B30,B33,B39,B49,B53,B59,B66,B80,B87,B91,B98,C1,C20,C39,C46,C52,C68,C72,C79,C82,D6,D7
typical_cds_rare	Chr3	43120165	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	B140
lof_cds	Chr3	43120174	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	A22,B104,B52,B75,B9
typical_cds_rare	Chr3	43120174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	A22,B104,B52,B75,B9
typical_cds_rare	Chr3	43120199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B109,C28
typical_cds_rare	Chr3	43120225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C73,D3
typical_cds_rare	Chr3	43120241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B104,B85
lof_cds	Chr3	43120271	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B117,D7
typical_cds_rare	Chr3	43120271	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B117,D7
typical_cds_rare	Chr3	43120298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	A18
typical_cds_rare	Chr3	43120373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C83
typical_cds_rare	Chr3	43120380	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	B85
typical_cds_rare	Chr3	43120382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B49,C39,D10
typical_cds_rare	Chr3	43120426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B49,C39,D10
typical_cds_rare	Chr3	43120427	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	C44,C73,C82,D6
lof_cds	Chr3	43120438	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	43	A18,A2,A22,A23,A7,B100,B104,B109,B112,B114,B117,B121,B125,B139,B26,B29,B35,B46,B47,B64,B67,B71,B73,B8,B82,C11,C13,C26,C28,C30,C37,C40,C63,C65,C69,C78,C80,C83,C87,D10,D11,D7,D8
lof_cds	Chr3	43120443	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B117,B129,B46,B93,C85
typical_cds_rare	Chr3	43120443	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B117,B129,B46,B93,C85
typical_cds_rare	Chr3	43120458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C73,D3
typical_cds_rare	Chr3	43120460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C14
typical_cds_rare	Chr3	43120461	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C29
typical_cds_rare	Chr3	43120489	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B63,B83
typical_cds_rare	Chr3	43120495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	D10
lof_cds	Chr3	43120539	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	29	A22,A3,A7,B101,B108,B109,B115,B13,B135,B19,B21,B22,B23,B40,B55,B58,B8,B80,B93,B94,C1,C31,C34,C42,C55,C60,C63,C67,D8
typical_cds_rare	Chr3	43120548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B119,B131,B9,C31
lof_cds	Chr3	43120591	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	15	A3,B102,B18,B38,B4,B63,C14,C28,C38,C49,C50,C53,C64,C66,D2
typical_cds_rare	Chr3	43120625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	A22,B104
typical_cds_rare	Chr3	43120650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	D10
typical_cds_rare	Chr3	43120663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B119,B131,B9,C31
lof_cds	Chr3	43120675	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	14	A10,B111,B120,B28,B29,B30,B91,C1,C32,C39,C46,C52,C68,C79
typical_cds_rare	Chr3	43120699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B49,C39,D10
typical_cds_rare	Chr3	43120700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B129,B46,B93,C85
typical_cds_rare	Chr3	43120707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C73,D3
typical_cds_rare	Chr3	43120708	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C44
lof_cds	Chr3	43120718	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B117,B13
typical_cds_rare	Chr3	43120718	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B117,B13
typical_cds_rare	Chr3	43120745	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C30
typical_cds_rare	Chr3	43120755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B131,B27,B78,C44,C51
typical_cds_rare	Chr3	43120761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B86,B99,C1,C40,C44
typical_cds_rare	Chr3	43120771	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	A6,C55,D6
lof_cds	Chr3	43120863	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	37	A10,A18,A20,B111,B112,B12,B120,B122,B133,B140,B2,B28,B29,B30,B38,B39,B42,B43,B46,B55,B64,B73,B90,B91,B92,C1,C24,C32,C39,C42,C46,C52,C6,C68,C79,C86,D10
typical_cds_rare	Chr3	43120901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B61,B74,C3,C5,C74
typical_cds_rare	Chr3	43120937	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C73,D3
lof_cds	Chr3	43120983	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	10	A5,A8,B122,B126,B7,B72,C32,C68,C85,D4
lof_cds	Chr3	43120991	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	9	A15,B38,B39,B4,B63,C28,C49,C64,C66
typical_cds_rare	Chr3	43120998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C29
typical_cds_rare	Chr3	43121005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	C50,C8
typical_cds_rare	Chr3	43121020	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C83
typical_cds_rare	Chr3	43121035	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C77
typical_cds_rare	Chr3	43121062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	B75
typical_cds_rare	Chr3	43121063	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B86,B99,C1,C40,C44
typical_cds_rare	Chr3	43121081	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B121,C26
typical_cds_rare	Chr3	43121087	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B121,C26
lof_cds	Chr3	43121096	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B49,C39,D10
typical_cds_rare	Chr3	43121096	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B49,C39,D10
typical_cds_rare	Chr3	43121176	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	C82
typical_cds_rare	Chr3	43121181	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	1	A16
typical_cds_rare	Chr3	43121203	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	A9,C49
typical_cds_rare	Chr3	43121228	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	B1,B102,C53,D2
typical_cds_rare	Chr3	43121333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	5	B33,B74,C3,C5,C74
typical_cds_rare	Chr3	43121351	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	3	B137,B83,C19
typical_cds_rare	Chr3	43121380	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	4	A22,B104,B5,C21
typical_cds_rare	Chr3	43121401	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015888	SmilChr03G002717	131015888	rna-XM_057944365.1	2	B57,C60