source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	44413713	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	4	B132,B137,B76,C37
typical_cds_rare	Chr3	44413848	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	5	B15,B19,B40,B55,B85
typical_cds_rare	Chr3	44413881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	3	A7,B40,C39
typical_cds_rare	Chr3	44413914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B132
lof_cds	Chr3	44414005	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	222	A1,A10,A11,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B126,B127,B129,B13,B130,B131,B133,B134,B135,B136,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B26,B27,B28,B3,B30,B33,B34,B35,B36,B38,B4,B41,B42,B43,B44,B45,B47,B48,B49,B50,B51,B52,B53,B55,B56,B57,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B68,B69,B7,B70,B72,B73,B74,B75,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C21,C22,C23,C24,C25,C27,C28,C29,C3,C30,C33,C35,C36,C37,C38,C39,C4,C40,C43,C44,C45,C47,C5,C50,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C73,C74,C75,C76,C77,C79,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D2,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	44414009	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	222	A1,A10,A11,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A25,A3,A4,A5,A6,A7,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B126,B127,B129,B13,B130,B131,B133,B134,B135,B136,B137,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B26,B27,B28,B3,B30,B33,B34,B35,B36,B38,B39,B4,B41,B42,B43,B44,B45,B47,B48,B49,B50,B51,B52,B53,B55,B56,B57,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B68,B69,B7,B70,B72,B73,B74,B75,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C21,C22,C23,C24,C25,C27,C28,C29,C3,C30,C33,C35,C36,C37,C38,C39,C4,C40,C43,C44,C45,C47,C5,C50,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C73,C74,C75,C76,C77,C79,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D2,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	44414057	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	4	B22,B78,B87,B90
typical_cds_rare	Chr3	44414057	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	4	B22,B78,B87,B90
lof_cds	Chr3	44414059	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	129	A1,A10,A11,A14,A15,A19,A2,A20,A21,A22,A23,A4,A7,A8,B1,B101,B105,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B12,B121,B123,B124,B125,B126,B133,B134,B135,B14,B18,B19,B2,B20,B23,B24,B28,B3,B30,B34,B35,B36,B38,B43,B44,B45,B47,B49,B50,B51,B56,B57,B60,B61,B64,B65,B72,B74,B77,B79,B8,B81,B82,B83,B84,B85,B86,B88,B91,B96,B97,B98,B99,C1,C10,C11,C13,C14,C15,C16,C21,C24,C25,C26,C27,C29,C33,C34,C35,C36,C40,C41,C43,C44,C45,C5,C50,C55,C57,C58,C60,C62,C65,C67,C69,C72,C73,C77,C79,C8,C80,C81,C82,C83,C9,D1,D10,D4,D8,D9
lof_cds	Chr3	44414062	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B88
typical_cds_rare	Chr3	44414062	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B88
lof_cds	Chr3	44414063	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	132	A1,A10,A11,A14,A15,A19,A2,A20,A21,A22,A23,A4,A7,A8,B1,B101,B105,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B12,B121,B123,B124,B125,B126,B133,B134,B135,B14,B18,B19,B2,B20,B22,B23,B24,B28,B3,B30,B34,B35,B36,B38,B43,B44,B45,B47,B49,B50,B51,B56,B57,B60,B61,B64,B65,B72,B74,B77,B78,B79,B8,B81,B82,B83,B84,B85,B86,B87,B90,B91,B96,B97,B98,B99,C1,C10,C11,C13,C14,C15,C16,C21,C24,C25,C26,C27,C29,C33,C34,C35,C36,C40,C41,C43,C44,C45,C5,C50,C55,C57,C58,C60,C62,C65,C67,C69,C72,C73,C77,C79,C8,C80,C81,C82,C83,C9,D1,D10,D4,D8,D9
typical_cds_rare	Chr3	44414067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B63,D4
lof_cds	Chr3	44414071	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	128	A1,A10,A11,A14,A15,A19,A2,A20,A21,A22,A23,A4,A7,A8,B1,B101,B105,B106,B107,B108,B109,B11,B111,B112,B114,B115,B117,B118,B119,B121,B123,B124,B125,B126,B133,B134,B135,B14,B18,B19,B2,B20,B22,B23,B24,B28,B3,B30,B34,B35,B38,B43,B44,B45,B47,B49,B50,B51,B56,B57,B60,B61,B64,B65,B72,B74,B78,B79,B8,B81,B82,B83,B84,B85,B86,B87,B90,B91,B96,B97,B98,B99,C1,C11,C13,C14,C15,C16,C21,C24,C25,C26,C27,C29,C33,C34,C35,C36,C40,C41,C43,C44,C45,C5,C50,C55,C57,C58,C60,C62,C65,C67,C69,C72,C73,C77,C79,C8,C80,C81,C82,C83,C9,D1,D10,D4,D8,D9
lof_cds	Chr3	44414128	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C27
typical_cds_rare	Chr3	44414128	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C27
lof_cds	Chr3	44414144	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	C41,C67
typical_cds_rare	Chr3	44414144	CGT	C	INDEL	2bp_deletion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	C41,C67
typical_cds_rare	Chr3	44414163	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	4	B136,B4,B52,C41
typical_cds_rare	Chr3	44414232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D10
lof_cds	Chr3	44414235	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B11,C51
typical_cds_rare	Chr3	44414235	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B11,C51
typical_cds_rare	Chr3	44414261	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	3	B127,B9,C42
typical_cds_rare	Chr3	44414275	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	3	C2,C56,D11
lof_cds	Chr3	44414317	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D11
typical_cds_rare	Chr3	44414317	C	CAA	INDEL	2bp_insertion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D11
typical_cds_rare	Chr3	44414323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D11
typical_cds_rare	Chr3	44414337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B104
typical_cds_rare	Chr3	44414361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C30
lof_cds	Chr3	44414384	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	18	A24,A9,B1,B30,B45,B47,B50,B55,B72,B90,B96,C19,C56,C57,C82,C87,D11,D6
lof_cds	Chr3	44414396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	19	A24,A9,B1,B30,B45,B47,B50,B55,B72,B90,B96,C19,C56,C57,C74,C82,C87,D11,D6
typical_cds_rare	Chr3	44414405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	5	B30,B90,C57,C74,D6
typical_cds_rare	Chr3	44414634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C13
lof_cds	Chr3	44414658	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D2
typical_cds_rare	Chr3	44414658	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D2
typical_cds_rare	Chr3	44414673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B108,C23
typical_cds_rare	Chr3	44414695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B1,C13
typical_cds_rare	Chr3	44414811	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B44
typical_cds_rare	Chr3	44414823	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	5	B105,B112,B134,B14,B31
typical_cds_rare	Chr3	44414840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C57
typical_cds_rare	Chr3	44414891	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B13
typical_cds_rare	Chr3	44414983	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	4	B73,C38,C53,C78
typical_cds_rare	Chr3	44415126	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B1,C13
typical_cds_rare	Chr3	44415216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B42,B43
typical_cds_rare	Chr3	44415222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B13
typical_cds_rare	Chr3	44415564	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B1,C13
typical_cds_rare	Chr3	44415672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B104
typical_cds_rare	Chr3	44415729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	B80
typical_cds_rare	Chr3	44415815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	3	B57,B65,D11
typical_cds_rare	Chr3	44415834	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	5	A4,B109,B112,B132,B76
typical_cds_rare	Chr3	44415921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B57,B65
typical_cds_rare	Chr3	44415927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	5	A21,B66,B85,C77,D1
typical_cds_rare	Chr3	44416077	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	D6
typical_cds_rare	Chr3	44416214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B118,C6
typical_cds_rare	Chr3	44416290	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B33,C82
lof_cds	Chr3	44416299	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	9	A16,B105,B112,B134,B14,B31,B32,B77,C48
typical_cds_rare	Chr3	44416377	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	3	B104,B49,C45
typical_cds_rare	Chr3	44416517	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	2	B49,C45
typical_cds_rare	Chr3	44416698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015962	SmilChr03G002793	131015962	rna-XM_057944478.1	1	C40