source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	45564424	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	3	A7,B16,B40
lof_cds	Chr3	45565892	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	C8
typical_cds_rare	Chr3	45565892	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	C8
typical_cds_rare	Chr3	45565907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	C8
lof_cds	Chr3	45565930	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	A21
typical_cds_rare	Chr3	45565930	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	A21
typical_cds_rare	Chr3	45566031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	C8
lof_cds	Chr3	45566154	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	21	A13,A6,A8,B102,B106,B125,B131,B135,B21,B32,B45,B50,B92,B99,C17,C22,C37,C43,C67,C76,D7
lof_cds	Chr3	45566155	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	20	A13,A6,A8,B102,B106,B125,B131,B135,B21,B32,B45,B50,B92,B99,C17,C22,C37,C43,C76,D7
lof_cds	Chr3	45566261	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	2	A18,C27
typical_cds_rare	Chr3	45566261	GTC	G	INDEL	2bp_deletion	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	2	A18,C27
lof_cds	Chr3	45566376	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	B4
typical_cds_rare	Chr3	45566376	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	B4
lof_cds	Chr3	45566493	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	111	A11,A14,A16,A2,A23,A24,A25,A3,A6,B1,B100,B101,B107,B108,B111,B113,B114,B115,B118,B120,B121,B122,B124,B125,B127,B129,B130,B132,B133,B135,B136,B17,B2,B20,B21,B22,B27,B30,B32,B33,B35,B4,B40,B41,B44,B47,B49,B50,B54,B58,B59,B64,B65,B67,B69,B7,B71,B75,B77,B78,B79,B8,B80,B81,B84,B86,B87,B9,B90,B93,B97,B98,C12,C14,C27,C28,C3,C32,C33,C36,C39,C42,C43,C47,C48,C5,C52,C54,C55,C56,C62,C63,C64,C65,C66,C67,C69,C70,C71,C72,C74,C75,C78,C8,C80,C81,C9,D3,D4,D6,D8
lof_cds	Chr3	45566498	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	112	A11,A14,A16,A2,A23,A24,A25,A3,A6,B1,B100,B101,B107,B108,B111,B113,B114,B115,B118,B120,B121,B122,B124,B125,B127,B128,B129,B130,B132,B133,B135,B136,B17,B2,B20,B21,B22,B27,B30,B32,B33,B35,B4,B40,B41,B44,B47,B49,B50,B54,B58,B59,B64,B65,B67,B69,B7,B71,B75,B77,B78,B79,B8,B80,B81,B84,B86,B87,B9,B90,B93,B97,B98,C12,C14,C27,C28,C3,C32,C33,C36,C39,C42,C43,C47,C48,C5,C52,C54,C55,C56,C62,C63,C64,C65,C66,C67,C69,C70,C71,C72,C74,C75,C78,C8,C80,C81,C9,D3,D4,D6,D8
lof_cds	Chr3	45566680	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	213	A1,A11,A13,A14,A15,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B100,B103,B104,B105,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B12,B120,B123,B124,B125,B127,B128,B129,B13,B130,B131,B132,B134,B135,B136,B137,B139,B140,B15,B16,B17,B19,B2,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B60,B61,B63,B64,B65,B66,B67,B7,B70,B71,B72,B73,B74,B75,B77,B78,B79,B8,B81,B82,B83,B84,B85,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B99,C11,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C44,C45,C47,C48,C5,C51,C52,C53,C55,C56,C57,C58,C59,C6,C60,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C8,C80,C83,C84,C87,C9,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	45566684	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	214	A1,A11,A13,A14,A15,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B100,B103,B104,B105,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B12,B120,B123,B124,B125,B127,B128,B129,B13,B130,B131,B132,B134,B135,B136,B137,B139,B140,B15,B16,B17,B19,B2,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B60,B61,B63,B64,B65,B66,B67,B7,B70,B71,B72,B73,B74,B75,B77,B78,B79,B8,B81,B82,B83,B84,B85,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B99,C11,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C47,C48,C5,C51,C52,C53,C55,C56,C57,C58,C59,C6,C60,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C8,C80,C83,C84,C87,C9,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	45566691	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	115	A11,A18,A2,A20,A22,A24,A25,A5,A9,B100,B103,B104,B105,B109,B11,B110,B117,B118,B12,B123,B125,B127,B13,B131,B132,B134,B135,B137,B140,B15,B17,B19,B21,B22,B25,B26,B28,B34,B36,B39,B40,B45,B47,B48,B5,B51,B56,B60,B61,B63,B64,B66,B67,B70,B71,B74,B75,B82,B86,B88,B9,B90,B92,B99,C13,C15,C16,C18,C19,C20,C24,C26,C27,C29,C3,C30,C31,C32,C34,C35,C37,C38,C4,C40,C41,C44,C45,C5,C51,C52,C53,C56,C57,C6,C65,C66,C67,C68,C7,C70,C74,C75,C76,C83,C84,C87,C9,D1,D10,D2,D3,D4,D6,D8,D9
lof_cds	Chr3	45566694	T	TAA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	111	A11,A18,A2,A22,A24,A25,A5,A9,B100,B103,B104,B105,B109,B11,B110,B117,B12,B123,B125,B127,B13,B131,B132,B134,B135,B137,B140,B15,B17,B19,B21,B22,B25,B26,B28,B34,B36,B39,B40,B45,B47,B48,B5,B51,B56,B60,B61,B63,B64,B66,B67,B70,B71,B74,B75,B82,B86,B88,B9,B90,B92,B99,C13,C15,C16,C18,C19,C20,C24,C26,C27,C29,C3,C30,C31,C32,C34,C37,C38,C4,C40,C41,C44,C45,C5,C51,C52,C53,C56,C57,C6,C65,C66,C67,C68,C7,C70,C74,C76,C83,C84,C87,C9,D1,D10,D2,D3,D4,D6,D8,D9
typical_cds_rare	Chr3	45566700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	C66
typical_cds_rare	Chr3	45566741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	2	B130,B73
typical_cds_rare	Chr3	45566839	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	B16
lof_cds	Chr3	45566945	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	21	A16,B109,B111,B125,B20,B22,B27,B32,B33,B34,B59,B68,B7,B92,C1,C19,C46,C59,C70,D3,D8
lof_cds	Chr3	45566961	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	3	B20,B24,C66
typical_cds_rare	Chr3	45566961	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	3	B20,B24,C66
lof_cds	Chr3	45566962	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	32	A19,A20,B105,B109,B111,B125,B130,B132,B14,B22,B27,B32,B33,B34,B59,B68,B7,B92,C1,C19,C25,C29,C31,C33,C46,C59,C70,C75,D10,D11,D3,D8
typical_cds_rare	Chr3	45566967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	D10
lof_cds	Chr3	45566975	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	30	A16,A19,B105,B109,B111,B125,B130,B14,B22,B23,B27,B32,B34,B59,B68,B7,B92,C1,C19,C25,C29,C31,C33,C46,C59,C70,C75,D10,D3,D8
lof_cds	Chr3	45566980	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	31	A16,A19,A20,B105,B109,B111,B125,B130,B14,B20,B22,B23,B24,B27,B32,B34,B59,B68,B7,B92,C1,C19,C25,C31,C33,C59,C70,C75,D10,D3,D8
lof_cds	Chr3	45566997	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	67	A16,A19,A20,A25,A3,A8,B101,B103,B105,B109,B111,B118,B12,B125,B13,B130,B134,B14,B20,B22,B23,B24,B27,B32,B34,B38,B39,B42,B5,B53,B55,B57,B59,B62,B64,B65,B68,B7,B79,B81,B83,B84,B85,B92,B99,C1,C14,C19,C2,C25,C27,C31,C33,C35,C39,C44,C55,C59,C6,C69,C70,C74,C75,D10,D3,D7,D8
lof_cds	Chr3	45567010	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	69	A14,A16,A20,A21,A25,A3,A8,B101,B103,B105,B109,B111,B118,B12,B125,B13,B130,B134,B14,B20,B22,B23,B24,B27,B31,B32,B34,B38,B39,B4,B42,B5,B53,B55,B57,B59,B62,B64,B65,B68,B81,B83,B84,B85,B92,B99,C1,C14,C19,C2,C25,C27,C29,C31,C33,C35,C39,C59,C6,C60,C69,C70,C74,C75,D10,D11,D3,D7,D8
lof_cds	Chr3	45567012	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	69	A14,A16,A20,A21,A25,A3,A8,B101,B103,B105,B109,B111,B118,B12,B125,B13,B130,B134,B14,B20,B22,B23,B24,B27,B31,B32,B34,B38,B39,B4,B42,B5,B53,B55,B57,B59,B62,B64,B65,B68,B81,B83,B84,B85,B92,B99,C1,C14,C19,C2,C25,C27,C29,C31,C33,C35,C39,C59,C6,C60,C69,C70,C74,C75,D10,D11,D3,D7,D8
typical_cds_rare	Chr3	45567028	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	4	A15,B7,B79,C55
typical_cds_rare	Chr3	45567029	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	1	B9
lof_cds	Chr3	45567124	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	21	A20,A3,B101,B137,B49,B53,B55,B56,B64,B72,B79,B81,B83,C4,C44,C45,C49,C6,C65,C74,C77
lof_cds	Chr3	45567125	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016048	SmilChr03G002889	131016048	rna-XM_057944592.1	19	A20,A3,B101,B137,B49,B53,B55,B56,B64,B72,B79,B81,B83,C4,C44,C45,C6,C65,C74