source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	46123486	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	15	A13,B107,B123,B137,B3,B31,B62,C18,C25,C29,C37,C44,C46,C48,C70
lof_cds	Chr3	46123487	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	112	A10,A14,A16,A18,A19,A20,A21,A23,A24,A4,A5,B1,B102,B105,B106,B108,B109,B110,B112,B114,B115,B118,B120,B121,B122,B124,B125,B129,B132,B134,B135,B136,B137,B138,B139,B14,B140,B16,B18,B19,B22,B23,B24,B32,B34,B4,B41,B44,B45,B46,B49,B52,B56,B58,B63,B64,B65,B67,B68,B7,B71,B75,B76,B78,B79,B8,B84,B85,B86,B87,B9,B90,B92,B93,B96,B97,C12,C15,C20,C21,C23,C28,C31,C33,C36,C38,C41,C42,C43,C45,C46,C47,C5,C50,C52,C53,C57,C60,C62,C7,C71,C73,C76,C77,C78,C80,C84,C9,D10,D11,D5,D9
lof_cds	Chr3	46123492	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	40	A1,A2,A25,B1,B10,B102,B105,B106,B11,B12,B121,B13,B137,B138,B2,B21,B26,B35,B36,B37,B43,B47,B63,B78,B89,C12,C22,C23,C26,C28,C3,C39,C45,C51,C59,C64,C66,C70,C74,C82
typical_cds_rare	Chr3	46123495	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	5	B126,B127,B33,C27,C87
typical_cds_rare	Chr3	46123511	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B37,C8
typical_cds_rare	Chr3	46123522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	A13,C18,D10
lof_cds	Chr3	46123562	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	65	A1,A10,A13,A18,A2,A8,B1,B102,B105,B106,B11,B113,B121,B122,B129,B13,B132,B138,B15,B18,B19,B2,B21,B26,B27,B34,B35,B36,B37,B42,B43,B44,B47,B55,B67,B8,B83,B85,B86,B87,B89,B9,B90,B92,B97,B99,C12,C23,C3,C36,C39,C45,C46,C48,C51,C54,C59,C64,C66,C70,C74,C77,C82,D10,D5
typical_cds_rare	Chr3	46123583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B9,C48
lof_cds	Chr3	46123589	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	67	A13,A14,A20,A24,A3,A5,B100,B103,B105,B106,B110,B111,B113,B117,B118,B120,B123,B124,B128,B129,B130,B138,B139,B16,B17,B20,B29,B30,B31,B32,B45,B65,B69,B7,B81,B90,B91,B92,C1,C13,C18,C20,C25,C28,C30,C31,C38,C39,C42,C49,C5,C50,C52,C55,C57,C60,C62,C7,C73,C77,C83,C84,C9,D10,D11,D6,D7
lof_cds	Chr3	46123629	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	42	A16,A20,A23,B101,B109,B112,B115,B120,B123,B134,B137,B14,B140,B24,B31,B4,B41,B46,B56,B58,B63,B68,B70,B71,B76,B78,B8,B84,B87,B93,B96,C15,C31,C37,C38,C4,C43,C50,C57,C60,C76,D9
lof_cds	Chr3	46123666	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	91	A1,A10,A13,A15,A18,A19,A21,A25,A4,A8,B1,B10,B102,B108,B11,B114,B121,B122,B125,B129,B132,B135,B136,B15,B18,B19,B2,B21,B22,B23,B26,B29,B34,B35,B36,B37,B42,B43,B44,B47,B49,B5,B52,B55,B57,B61,B64,B67,B7,B75,B79,B83,B85,B86,B9,B97,B99,C12,C14,C16,C22,C23,C26,C27,C3,C33,C36,C39,C41,C44,C45,C46,C48,C51,C53,C54,C58,C59,C64,C71,C74,C77,C78,C80,C82,C84,C85,D1,D10,D11,D5
typical_cds_rare	Chr3	46123695	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	D10
typical_cds_rare	Chr3	46123703	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	C15,C20,C47
lof_cds	Chr3	46123710	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	40	A15,A18,A7,B117,B136,B17,B18,B20,B25,B26,B6,B60,B62,B70,B71,B74,B80,B81,B93,B98,C10,C19,C2,C24,C29,C35,C40,C47,C52,C62,C67,C70,C71,C72,C78,C80,C81,C83,C86,D4
typical_cds_rare	Chr3	46123727	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	B73
lof_cds	Chr3	46123737	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	56	A14,A22,A24,A4,A5,A7,B10,B105,B106,B109,B11,B110,B112,B113,B118,B120,B124,B133,B138,B139,B16,B30,B31,B32,B38,B39,B45,B53,B65,B74,B75,B76,B90,B91,B92,C11,C16,C20,C25,C28,C34,C38,C42,C46,C5,C52,C60,C62,C63,C67,C69,C7,C73,C76,C86,C9
lof_cds	Chr3	46123738	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	10	A6,B103,B111,B140,B28,B39,C32,C37,C68,C81
typical_cds_rare	Chr3	46123755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B75,C33,D11
typical_cds_rare	Chr3	46123763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	4	B132,B64,B82,C24
typical_cds_rare	Chr3	46123810	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B73,C8
typical_cds_rare	Chr3	46123818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	4	B67,B76,B82,C57
typical_cds_rare	Chr3	46123821	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	4	B67,B76,B82,C57
typical_cds_rare	Chr3	46123966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	4	B33,B74,B85,C87
typical_cds_rare	Chr3	46123969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B100,C21,C64
typical_cds_rare	Chr3	46123970	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	5	A13,B33,B74,B85,C87
typical_cds_rare	Chr3	46123974	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B104,B6,C34
typical_cds_rare	Chr3	46123977	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B100,C64
typical_cds_rare	Chr3	46123989	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B33,B85,C87
typical_cds_rare	Chr3	46123996	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B33,C82,C87
typical_cds_rare	Chr3	46123997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	3	B100,C21,C64
typical_cds_rare	Chr3	46124003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B100,C21
typical_cds_rare	Chr3	46124015	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	B33
lof_cds	Chr3	46124050	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	96	A1,A10,A13,A15,A19,A21,A25,A4,A8,B1,B10,B102,B108,B11,B114,B12,B121,B122,B125,B129,B13,B132,B135,B136,B15,B18,B19,B2,B21,B22,B23,B26,B27,B29,B34,B35,B36,B37,B42,B43,B44,B47,B49,B5,B52,B55,B57,B61,B64,B67,B7,B75,B79,B83,B85,B86,B89,B9,B97,B99,C12,C14,C16,C22,C23,C26,C27,C3,C33,C36,C39,C41,C44,C45,C46,C48,C51,C53,C54,C58,C59,C64,C66,C70,C71,C74,C77,C78,C80,C82,C84,C85,D1,D10,D11,D5
typical_cds_rare	Chr3	46124058	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	B114
typical_cds_rare	Chr3	46124060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	B53
lof_cds	Chr3	46124072	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	8	A13,A6,B14,B45,B51,B61,B89,C17
typical_cds_rare	Chr3	46124078	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	B4
typical_cds_rare	Chr3	46124116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B38,B39
typical_cds_rare	Chr3	46124125	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	2	B73,C8
lof_cds	Chr3	46124280	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	D11
typical_cds_rare	Chr3	46124280	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC131018878	SmilChr03G002940	131018878	rna-XM_057947573.1	1	D11