source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	48441917	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B66
lof_cds	Chr3	48441925	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	52	A13,A23,B105,B113,B129,B132,B134,B136,B18,B19,B21,B29,B3,B30,B32,B38,B4,B45,B51,B52,B55,B56,B64,B76,B78,B82,B86,B88,B9,B93,B94,B95,B96,C10,C11,C12,C14,C16,C25,C32,C49,C54,C59,C68,C69,C7,C79,C83,D11,D4,D8,D9
lof_cds	Chr3	48441943	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	8	B101,B123,B131,B82,C34,C63,C65,C77
lof_cds	Chr3	48441987	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B32,C49
typical_cds_rare	Chr3	48441987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B32,C49
typical_cds_rare	Chr3	48442006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	C12,C15,C21
typical_cds_rare	Chr3	48442023	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	D4
typical_cds_rare	Chr3	48442032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	C27,C33,D4
typical_cds_rare	Chr3	48442064	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	A21,B57,C19,C8
lof_cds	Chr3	48442080	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B129,B81
typical_cds_rare	Chr3	48442080	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B129,B81
typical_cds_rare	Chr3	48442113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B119,B90,C13,C52
typical_cds_rare	Chr3	48442116	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B129
typical_cds_rare	Chr3	48442152	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B59,B93,C50,C53
typical_cds_rare	Chr3	48442157	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B55,B82,C87
typical_cds_rare	Chr3	48442158	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	5	B42,B43,B52,B98,C48
typical_cds_rare	Chr3	48442159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B4,B99,C36
typical_cds_rare	Chr3	48442180	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B59,C50
typical_cds_rare	Chr3	48442197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	A9,B28,C44,C71
typical_cds_rare	Chr3	48442205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C79
typical_cds_rare	Chr3	48442224	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B136,B2,C54
lof_cds	Chr3	48442238	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	167	A1,A10,A11,A13,A15,A16,A18,A2,A20,A21,A24,A25,A3,A5,A7,B1,B10,B100,B101,B102,B103,B104,B106,B107,B109,B11,B110,B112,B113,B114,B115,B117,B118,B12,B121,B122,B123,B125,B126,B127,B13,B131,B132,B134,B135,B137,B138,B139,B14,B15,B18,B19,B21,B22,B23,B27,B32,B34,B35,B37,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B49,B5,B50,B52,B53,B56,B57,B6,B60,B63,B64,B66,B68,B69,B70,B72,B75,B76,B78,B8,B82,B83,B84,B85,B87,B88,B89,B90,B91,B92,B97,B98,B99,C1,C10,C13,C14,C16,C17,C18,C20,C21,C23,C25,C26,C27,C28,C29,C3,C32,C34,C35,C36,C37,C38,C4,C40,C41,C42,C43,C45,C46,C47,C5,C50,C51,C53,C56,C58,C59,C6,C60,C61,C64,C65,C66,C67,C68,C70,C71,C72,C73,C77,C78,C79,C82,C9,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	48442267	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C52
typical_cds_rare	Chr3	48442267	CCG	C	INDEL	2bp_deletion	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C52
typical_cds_rare	Chr3	48442299	TG	*	INDEL	1bp_deletion	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B133,B28,B87
lof_cds	Chr3	48442303	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	65	A13,A14,A23,A24,A25,A5,A6,B100,B107,B109,B11,B110,B111,B112,B114,B118,B122,B126,B13,B131,B135,B138,B25,B28,B31,B32,B34,B35,B41,B42,B43,B54,B55,B61,B62,B63,B71,B83,B86,B89,B93,C10,C12,C23,C25,C26,C32,C35,C36,C42,C45,C49,C5,C51,C52,C60,C62,C68,C73,C74,C75,C83,C85,D1,D11
typical_cds_rare	Chr3	48442322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C44
typical_cds_rare	Chr3	48442331	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B39,B79,C48
typical_cds_rare	Chr3	48442335	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B39,C48,C82
lof_cds	Chr3	48442385	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	13	B117,B120,B138,B16,B33,B72,C33,C40,C47,C53,D1,D2,D3
typical_cds_rare	Chr3	48442403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	C17,C4
typical_cds_rare	Chr3	48442422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B95,C65
typical_cds_rare	Chr3	48442438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	D10
typical_cds_rare	Chr3	48442452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B59,C64,C66
typical_cds_rare	Chr3	48442463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	D10
lof_cds	Chr3	48442484	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B136,B2,C49
typical_cds_rare	Chr3	48442484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B136,B2,C49
typical_cds_rare	Chr3	48453068	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C38
typical_cds_rare	Chr3	48453131	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B134,B21,C28,C74
typical_cds_rare	Chr3	48453144	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B65,C76
typical_cds_rare	Chr3	48453151	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B9
typical_cds_rare	Chr3	48453156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B124,B88,C22
typical_cds_rare	Chr3	48453171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	A5,C71
typical_cds_rare	Chr3	48453174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B65,C76
typical_cds_rare	Chr3	48453184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B124,B88
typical_cds_rare	Chr3	48453186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	A3,C62
typical_cds_rare	Chr3	48453197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B63,B83
typical_cds_rare	Chr3	48453227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C61
lof_cds	Chr3	48453256	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B59,C50
typical_cds_rare	Chr3	48453256	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B59,C50
typical_cds_rare	Chr3	48453273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B65,B75,C13
typical_cds_rare	Chr3	48453311	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B4,C12,C15
typical_cds_rare	Chr3	48453346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B102,C68,C78
lof_cds	Chr3	48453449	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C30
typical_cds_rare	Chr3	48453449	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C30
typical_cds_rare	Chr3	48453468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B59,B93,C50,C53
typical_cds_rare	Chr3	48453469	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B118,B41,C10,C74
typical_cds_rare	Chr3	48453479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C38
typical_cds_rare	Chr3	48453483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	A18
typical_cds_rare	Chr3	48453498	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	A18
typical_cds_rare	Chr3	48453516	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B93,C50,C53
typical_cds_rare	Chr3	48453543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C39
typical_cds_rare	Chr3	48453551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C82
typical_cds_rare	Chr3	48453588	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	A2,A21,B83,B9
typical_cds_rare	Chr3	48453597	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B41,B88,C39,C61
typical_cds_rare	Chr3	48453602	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C12
typical_cds_rare	Chr3	48453613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	A21,B83,B9
typical_cds_rare	Chr3	48453619	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	5	A2,B33,B61,B99,C78
typical_cds_rare	Chr3	48453625	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	3	B61,B65,C78
typical_cds_rare	Chr3	48453633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	C15
typical_cds_rare	Chr3	48453636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B65,C15
typical_cds_rare	Chr3	48453660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B25,C15,C55,D7
typical_cds_rare	Chr3	48453664	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	A23,B113,B68,B69
typical_cds_rare	Chr3	48453666	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B44,B56,B65,C24
typical_cds_rare	Chr3	48453684	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	4	B59,B93,C50,C53
typical_cds_rare	Chr3	48453697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B46
lof_cds	Chr3	48453703	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B124
typical_cds_rare	Chr3	48453703	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	1	B124
typical_cds_rare	Chr3	48453707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131016273	SmilChr03G003126	131016273	rna-XM_057944918.1	2	B81,C74