source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	49256692	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B23,B76,C35
typical_cds_rare	Chr3	49256692	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B23,B76,C35
lof_cds	Chr3	49256695	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B126
typical_cds_rare	Chr3	49256695	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B126
typical_cds_rare	Chr3	49256697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B113,B124,C10,C58,C9
lof_cds	Chr3	49256698	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B108,B18,B55,C11
typical_cds_rare	Chr3	49256698	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B108,B18,B55,C11
typical_cds_rare	Chr3	49256727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B101,B136,B24,C25,C35
typical_cds_rare	Chr3	49256728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B126
typical_cds_rare	Chr3	49256729	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	C38,D3
typical_cds_rare	Chr3	49256751	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A15,B13,B132,C70
typical_cds_rare	Chr3	49256757	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B115,B29,B31,B41
typical_cds_rare	Chr3	49256762	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	C35,C37,C4,C67
typical_cds_rare	Chr3	49256802	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A16,B47,B74,B80
lof_cds	Chr3	49256807	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	35	A16,A19,A4,B100,B101,B107,B12,B123,B124,B128,B131,B14,B140,B19,B43,B47,B50,B64,B65,B74,B91,B97,B98,C1,C18,C2,C29,C43,C49,C56,C63,C64,C79,C83,C87
typical_cds_rare	Chr3	49256813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B104,B3,B91
lof_cds	Chr3	49256822	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B71
typical_cds_rare	Chr3	49256822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B71
typical_cds_rare	Chr3	49256824	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A14,B115,B2,B42
lof_cds	Chr3	49256828	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	18	B1,B107,B108,B131,B18,B20,B45,B55,B6,B65,B8,B88,C11,C48,C5,C6,C67,C68
typical_cds_rare	Chr3	49256841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B131
typical_cds_rare	Chr3	49256843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B61
typical_cds_rare	Chr3	49256848	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B76,B8,B93,C44
typical_cds_rare	Chr3	49256863	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	A8,B48,C29
lof_cds	Chr3	49256864	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	9	B111,B15,B20,B31,B77,C30,C8,D11,D9
typical_cds_rare	Chr3	49256873	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B4,B40,C56,D1
lof_cds	Chr3	49256894	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B9,B93,C52
typical_cds_rare	Chr3	49256894	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B9,B93,C52
typical_cds_rare	Chr3	49256915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	C30,C32,C68,C70
lof_cds	Chr3	49256921	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	25	A7,B10,B126,B131,B140,B23,B30,B43,B67,B69,B71,B99,C11,C12,C17,C27,C39,C4,C49,C57,C59,C79,C81,C9,D10
lof_cds	Chr3	49256939	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	9	A11,B108,B112,B134,B2,B78,C23,C24,C71
typical_cds_rare	Chr3	49256945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B94,C37,C49,C57,C86
lof_cds	Chr3	49256955	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	59	A10,A18,A9,B1,B106,B107,B109,B112,B113,B119,B124,B126,B127,B131,B18,B27,B35,B37,B41,B45,B48,B50,B53,B54,B60,B65,B7,B70,B71,B72,B73,B77,B80,B82,B99,C1,C11,C13,C15,C16,C20,C29,C3,C33,C39,C43,C45,C46,C48,C54,C59,C6,C61,C66,C71,C79,C8,D4,D9
lof_cds	Chr3	49256978	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	24	A1,A6,A7,B10,B126,B131,B15,B22,B43,B45,B67,B69,B80,B82,B99,C12,C13,C17,C39,C4,C78,C79,C81,C9
lof_cds	Chr3	49256979	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	22	A18,A9,B112,B12,B124,B131,B18,B27,B45,B50,B65,B71,B80,B82,B83,C11,C16,C29,C33,C48,C6,D4
typical_cds_rare	Chr3	49256994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	A19,B101,C29
typical_cds_rare	Chr3	49257003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	A10,B106,B119,B22,C14
typical_cds_rare	Chr3	49257006	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	C33,C50
lof_cds	Chr3	49257008	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	30	A11,A19,A2,A5,B106,B123,B124,B125,B138,B14,B3,B45,B48,B59,B6,B60,B61,B63,B7,C11,C13,C16,C2,C46,C52,C57,C64,C69,C9,D2
lof_cds	Chr3	49257017	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C77
typical_cds_rare	Chr3	49257017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C77
typical_cds_rare	Chr3	49257018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	A4,B104,B34
typical_cds_rare	Chr3	49257034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B20,B51,B89,C61
typical_cds_rare	Chr3	49257046	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	B101,B29
typical_cds_rare	Chr3	49257069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	A1,B80,C4
typical_cds_rare	Chr3	49257110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	D10
typical_cds_rare	Chr3	49257117	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	D10
lof_cds	Chr3	49257140	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	8	A10,A24,B13,B132,B4,B58,B82,C70
typical_cds_rare	Chr3	49257142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	C33,C9
typical_cds_rare	Chr3	49257146	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	B19,D9
typical_cds_rare	Chr3	49257147	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C77
typical_cds_rare	Chr3	49257148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B14
typical_cds_rare	Chr3	49257149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B18
typical_cds_rare	Chr3	49257152	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C3
typical_cds_rare	Chr3	49257154	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B13,B4,B58,B94
typical_cds_rare	Chr3	49257156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B19,B86,C50,C59,D9
typical_cds_rare	Chr3	49257158	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B13,B4,B58
typical_cds_rare	Chr3	49257181	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B104,B43,C63,C9
lof_cds	Chr3	49257192	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	16	A1,A9,B100,B103,B115,B20,B47,B53,B55,B95,B98,C11,C34,C57,C66,C82
lof_cds	Chr3	49257193	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	10	A14,A20,B106,B118,B131,B56,B90,C21,C26,C35
lof_cds	Chr3	49257204	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B140,B44,D3
typical_cds_rare	Chr3	49257204	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B140,B44,D3
typical_cds_rare	Chr3	49257208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B140,B44,D3
typical_cds_rare	Chr3	49257221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	A2,B138,B42,B47,C36
typical_cds_rare	Chr3	49257222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B140,B44,D3
typical_cds_rare	Chr3	49257229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A21,B51,B57,B67
typical_cds_rare	Chr3	49257247	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B110,B23,C30
lof_cds	Chr3	49257250	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A20,C3,C38,C76
typical_cds_rare	Chr3	49257250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A20,C3,C38,C76
typical_cds_rare	Chr3	49257261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B121,B23,C27,D11,D5
typical_cds_rare	Chr3	49257269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	B44,B57
typical_cds_rare	Chr3	49257271	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	C32,C6
typical_cds_rare	Chr3	49257273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	C32,C6
typical_cds_rare	Chr3	49257300	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	B10,B107
typical_cds_rare	Chr3	49257306	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B104
typical_cds_rare	Chr3	49257312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	B105,C32
typical_cds_rare	Chr3	49257315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C78
typical_cds_rare	Chr3	49257318	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	A5,B90
typical_cds_rare	Chr3	49257319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B105
typical_cds_rare	Chr3	49257320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B104
typical_cds_rare	Chr3	49257322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B121,B23,B79,C16
typical_cds_rare	Chr3	49257324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C78
lof_cds	Chr3	49257325	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B105
typical_cds_rare	Chr3	49257325	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	B105
typical_cds_rare	Chr3	49257329	GC	*	INDEL	1bp_deletion	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B39,B79,C19
typical_cds_rare	Chr3	49257352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B136,B3,B5,C5
typical_cds_rare	Chr3	49257359	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B133,C10,C72
typical_cds_rare	Chr3	49257364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B133,C10,C72,C8
typical_cds_rare	Chr3	49257365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B33,B79,C8
typical_cds_rare	Chr3	49257373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	A5,C62
typical_cds_rare	Chr3	49257393	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	3	B17,B82,D2
typical_cds_rare	Chr3	49257399	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	5	B19,B54,B86,C59,D9
typical_cds_rare	Chr3	49257432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C40
typical_cds_rare	Chr3	49257438	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A2,B10,B43,C54
typical_cds_rare	Chr3	49257439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	1	C22
typical_cds_rare	Chr3	49257472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	2	A2,B43
typical_cds_rare	Chr3	49257473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	B106,B86,C50,C59
typical_cds_rare	Chr3	49257476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018931	SmilChr03G003180	131018931	rna-XM_057947616.1	4	A2,B10,B43,C54