source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	50980177	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	8	A3,B105,B136,B38,B44,B85,B94,C24
typical_cds_rare	Chr3	50980185	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B95,C22,C4
typical_cds_rare	Chr3	50980193	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B1,C4
lof_cds	Chr3	50980197	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B10,B15,B66,C22
typical_cds_rare	Chr3	50980197	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B10,B15,B66,C22
lof_cds	Chr3	50980246	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B100,B47,C38
typical_cds_rare	Chr3	50980246	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B100,B47,C38
typical_cds_rare	Chr3	50980247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B10,B91,C5,C74
lof_cds	Chr3	50980249	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	23	A2,A24,B119,B18,B36,B37,B52,B59,B74,B84,B95,C13,C18,C23,C25,C29,C35,C43,C46,C72,C74,C80,D8
lof_cds	Chr3	50980259	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	24	A2,A24,B1,B11,B132,B135,B18,B33,B36,B59,B68,B70,B87,C13,C29,C4,C40,C43,C45,C53,C69,C80,D1,D11
lof_cds	Chr3	50980603	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	16	A14,A20,A5,B108,B119,B127,B22,B37,B64,B87,C27,C32,C68,C84,C86,D8
typical_cds_rare	Chr3	50980617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B120,B138,D9
typical_cds_rare	Chr3	50980630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B140,C70
lof_cds	Chr3	50980631	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B22
typical_cds_rare	Chr3	50980631	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B22
typical_cds_rare	Chr3	50980640	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B22,B30,D6,D9
lof_cds	Chr3	50980645	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	13	A10,A23,B121,B131,B28,B37,B95,C14,C35,C41,C43,C75,C80
typical_cds_rare	Chr3	50980654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B46,B87,C25
typical_cds_rare	Chr3	50980667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B68
typical_cds_rare	Chr3	50980676	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	A10,B131
typical_cds_rare	Chr3	50980683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	C32,C68
typical_cds_rare	Chr3	50980688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B127,B41,C2,C60
typical_cds_rare	Chr3	50980698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	D10
lof_cds	Chr3	50980714	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	6	B1,B108,B41,C2,C60,C7
lof_cds	Chr3	50980715	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	A23
typical_cds_rare	Chr3	50980715	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	A23
typical_cds_rare	Chr3	50980727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	A3,B95,C8
typical_cds_rare	Chr3	50980735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	C9
typical_cds_rare	Chr3	50980746	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B101,B133,B64
typical_cds_rare	Chr3	50980747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B101,B133,B64
typical_cds_rare	Chr3	50980749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	C38,C79
typical_cds_rare	Chr3	50980757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B39
typical_cds_rare	Chr3	50980763	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	A18,B50,B77,C55,C74
typical_cds_rare	Chr3	50980778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B106,B35,B37,C5,D3
lof_cds	Chr3	50980780	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B119,D9
typical_cds_rare	Chr3	50980780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B119,D9
typical_cds_rare	Chr3	50980788	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B133,B64
typical_cds_rare	Chr3	50980805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B127,B39,B67,B97,C46
typical_cds_rare	Chr3	50980813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B133
lof_cds	Chr3	50980824	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	8	B12,B122,B52,C2,C37,C42,C61,C72
typical_cds_rare	Chr3	50980826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	A5,B128
typical_cds_rare	Chr3	50980877	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	A3,C11,C63,C69
typical_cds_rare	Chr3	50980880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	D11
typical_cds_rare	Chr3	50980905	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	A11,B64,B87,C50
typical_cds_rare	Chr3	50980906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B121,C11,C72
typical_cds_rare	Chr3	50980954	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B75,C11
typical_cds_rare	Chr3	50980964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B75,C11
typical_cds_rare	Chr3	50980965	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	A3,B71,B98,C30,C54
typical_cds_rare	Chr3	50981069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B66
lof_cds	Chr3	50981074	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	29	B10,B107,B120,B125,B126,B127,B131,B2,B28,B35,B72,B78,B79,B84,B90,B92,C1,C17,C18,C24,C27,C3,C49,C58,C65,C7,C73,C9,D2
typical_cds_rare	Chr3	50981087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	C11,C66,C82
lof_cds	Chr3	50981104	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	8	B122,B38,B39,B83,C15,C52,C84,D6
lof_cds	Chr3	50981111	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	C32,C68
typical_cds_rare	Chr3	50981111	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	C32,C68
typical_cds_rare	Chr3	50981118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	C63
typical_cds_rare	Chr3	50981137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B3,C15,C5,C71
typical_cds_rare	Chr3	50981138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B140,C35
typical_cds_rare	Chr3	50981139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B135
typical_cds_rare	Chr3	50981141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B3,C15,C5,C71
typical_cds_rare	Chr3	50981143	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B16,B4,C78
lof_cds	Chr3	50981147	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	44	A2,A23,A5,B11,B114,B115,B121,B123,B135,B18,B21,B28,B36,B37,B49,B58,B59,B61,B66,B67,B70,B73,B82,B84,B95,B98,C13,C14,C18,C30,C41,C43,C46,C53,C55,C61,C70,C72,C74,C80,C81,C82,C87,D1
typical_cds_rare	Chr3	50981439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B12,B37,B50,B77
typical_cds_rare	Chr3	50981442	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B136,B54,B57,C11,C77
typical_cds_rare	Chr3	50981468	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	A25,B95,C63
typical_cds_rare	Chr3	50981486	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B10,C83
lof_cds	Chr3	50981492	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	27	A13,A16,A2,A6,A8,B103,B121,B122,B127,B129,B131,B2,B35,B5,B54,B6,B76,B99,C1,C22,C34,C49,C54,C60,C67,C84,D5
typical_cds_rare	Chr3	50981517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B110,B20,C73,C83
typical_cds_rare	Chr3	50981519	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	A25,B95,C43,C63
typical_cds_rare	Chr3	50981539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B117,B21,B37
typical_cds_rare	Chr3	50981546	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	C61
typical_cds_rare	Chr3	50981551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	A4
typical_cds_rare	Chr3	50981553	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B102,B90,B91,C4
typical_cds_rare	Chr3	50981559	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B102,C4
lof_cds	Chr3	50981561	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	6	A6,B45,B7,B97,C6,C81
typical_cds_rare	Chr3	50981563	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B122,B134,B81,C27,C63
typical_cds_rare	Chr3	50981578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	C19,C32,C68
typical_cds_rare	Chr3	50981591	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B118,B4
lof_cds	Chr3	50981611	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	18	B122,B129,B131,B54,B55,B6,B76,B79,B87,B94,B99,C13,C18,C43,C67,C83,C84,C86
lof_cds	Chr3	50981614	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	A21,B23
typical_cds_rare	Chr3	50981614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	A21,B23
lof_cds	Chr3	50981638	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	23	A1,A18,A19,A4,B117,B123,B135,B137,B4,B57,B58,B59,B67,B75,B89,C13,C31,C32,C40,C43,C52,C81,C83
lof_cds	Chr3	50981652	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B111
typical_cds_rare	Chr3	50981652	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B111
lof_cds	Chr3	50981656	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B111
typical_cds_rare	Chr3	50981656	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B111
typical_cds_rare	Chr3	50981664	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	A23,B140,C17
typical_cds_rare	Chr3	50981675	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	1	B111
typical_cds_rare	Chr3	50981699	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	C32,C68
typical_cds_rare	Chr3	50981718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B115,B128
typical_cds_rare	Chr3	50981721	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B20,B69,B91,D4
typical_cds_rare	Chr3	50981736	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B121,B77,C74
typical_cds_rare	Chr3	50981743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B121,B77,C32,C68,C74
typical_cds_rare	Chr3	50981766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	A3,B134,B35,C55
typical_cds_rare	Chr3	50981767	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B34,C63
typical_cds_rare	Chr3	50981774	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B114,B115,B128,C17,C83
lof_cds	Chr3	50981794	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	60	A1,A10,A21,A24,A3,A6,A9,B107,B11,B117,B124,B134,B137,B140,B15,B18,B20,B23,B35,B4,B5,B6,B69,B75,B79,B8,B80,B83,B86,B9,B99,C1,C12,C14,C16,C20,C23,C25,C27,C30,C31,C33,C35,C37,C42,C48,C54,C55,C6,C61,C63,C70,C72,C73,C74,C76,C77,D4,D5,D8
typical_cds_rare	Chr3	50981798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	B114,B115,B128,C32,C68
typical_cds_rare	Chr3	50981815	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	A10,B48,C30
lof_cds	Chr3	50981851	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	36	A13,A8,A9,B103,B106,B114,B123,B128,B13,B133,B14,B19,B24,B34,B52,B56,B61,B82,B86,B89,B91,B93,B96,C21,C31,C37,C41,C44,C45,C49,C50,C76,C8,C82,C83,D7
typical_cds_rare	Chr3	50981852	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	A25,B87,C24,C70
typical_cds_rare	Chr3	50981858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	3	B100,B47,C38
typical_cds_rare	Chr3	50981866	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B19,B59,C24,D9
typical_cds_rare	Chr3	50981888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	4	B22,B3,B81,C55
typical_cds_rare	Chr3	50981915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	5	A20,B27,B44,B98,C10
typical_cds_rare	Chr3	50981916	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	2	B74,B76
lof_cds	Chr3	50981920	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018952	SmilChr03G003288	131018952	rna-XM_057947636.1	8	A1,A3,B109,B134,B35,B42,C30,C76