source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	53445133	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B9,C22,C25
lof_cds	Chr3	53445148	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	6	B16,B67,B89,C16,C47,D4
lof_cds	Chr3	53445151	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	76	A11,A16,A18,A24,A5,A6,A8,A9,B10,B103,B104,B107,B113,B114,B117,B12,B129,B13,B130,B132,B135,B14,B15,B16,B19,B22,B24,B25,B30,B36,B38,B39,B47,B49,B60,B63,B64,B74,B78,B79,B8,B83,B86,B9,B94,C10,C11,C12,C13,C17,C19,C21,C22,C23,C24,C25,C28,C3,C30,C34,C39,C4,C40,C42,C46,C49,C52,C58,C69,C72,C75,C86,C87,D1,D7,D9
typical_cds_rare	Chr3	53445158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B123
typical_cds_rare	Chr3	53445175	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B82,C14
typical_cds_rare	Chr3	53445185	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C48
typical_cds_rare	Chr3	53445187	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B124,B17
typical_cds_rare	Chr3	53445208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B138,B81,B87,C46,C53
typical_cds_rare	Chr3	53445229	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B104,B86,C35
typical_cds_rare	Chr3	53445230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B120,B140,C85
typical_cds_rare	Chr3	53445234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B1,B55,B57,B94,D1
typical_cds_rare	Chr3	53445249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B120,B21,C28,C67,C74
typical_cds_rare	Chr3	53445255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B108
typical_cds_rare	Chr3	53445257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B88,C53
typical_cds_rare	Chr3	53445267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C24
typical_cds_rare	Chr3	53445272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B111
typical_cds_rare	Chr3	53445280	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B24,C39
typical_cds_rare	Chr3	53445290	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	D10,D11
typical_cds_rare	Chr3	53445321	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B126,B62,B82,C65,C80
typical_cds_rare	Chr3	53445333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B71,C36,C62
typical_cds_rare	Chr3	53445340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B48,B56,B96
lof_cds	Chr3	53445352	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B121,B122,B71,C36,C62
typical_cds_rare	Chr3	53445352	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B121,B122,B71,C36,C62
typical_cds_rare	Chr3	53445356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B55,B6,C52
typical_cds_rare	Chr3	53445362	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B1,B119,B59,B73
typical_cds_rare	Chr3	53445367	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B132
typical_cds_rare	Chr3	53445373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B136,B138,B79,B98
typical_cds_rare	Chr3	53445387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B55
typical_cds_rare	Chr3	53445390	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B121,C8
typical_cds_rare	Chr3	53445424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B39,B89,C16,D4
lof_cds	Chr3	53445433	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	34	A15,A5,B113,B115,B117,B124,B13,B131,B132,B137,B138,B22,B46,B47,B48,B53,B55,B56,B62,B95,B96,C11,C29,C34,C46,C60,C63,C65,C67,C72,C78,C80,C85,D9
typical_cds_rare	Chr3	53445435	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	A2,B40
typical_cds_rare	Chr3	53445452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	A19,B136,B98,C72
typical_cds_rare	Chr3	53445478	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B114,B85,C33,C53
typical_cds_rare	Chr3	53445483	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B110,B133,B57,B88,C62
lof_cds	Chr3	53445485	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	48	A2,A22,A24,A4,B101,B103,B105,B123,B127,B134,B136,B140,B18,B22,B23,B46,B52,B63,B66,B7,B72,B8,B81,B88,B93,B99,C13,C15,C16,C19,C22,C26,C27,C30,C32,C38,C39,C40,C45,C49,C52,C55,C67,C70,C76,C79,C85,D5
lof_cds	Chr3	53445493	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	95	A1,A11,A16,A20,A23,A24,A4,A6,A8,B10,B103,B104,B107,B111,B112,B114,B117,B118,B12,B122,B125,B127,B128,B132,B137,B138,B139,B14,B140,B21,B22,B23,B24,B26,B29,B30,B38,B45,B48,B49,B50,B52,B53,B59,B64,B67,B71,B75,B78,B79,B8,B83,B9,B90,B92,B97,B99,C1,C10,C12,C13,C14,C18,C19,C2,C21,C23,C25,C26,C27,C34,C36,C37,C38,C4,C40,C41,C46,C49,C5,C50,C52,C55,C64,C7,C70,C73,C74,C75,C81,C86,D1,D11,D3,D7
typical_cds_rare	Chr3	53445496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	A23,B76
typical_cds_rare	Chr3	53445497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B112,B16
typical_cds_rare	Chr3	53445513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B104
lof_cds	Chr3	53445594	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	18	A22,B112,B115,B119,B122,B137,B20,B22,B28,B31,B68,B69,B85,B97,C1,C63,D7,D8
typical_cds_rare	Chr3	53445615	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	A23,B61,B76,C65
typical_cds_rare	Chr3	53445636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B89,C16,C3
lof_cds	Chr3	53445685	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	19	A20,A3,A4,B124,B21,B23,B7,C16,C22,C26,C31,C39,C49,C50,C55,C59,C78,C79,D10
typical_cds_rare	Chr3	53445693	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B89,C16,C3,D4
typical_cds_rare	Chr3	53445700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B55,B96,D5
typical_cds_rare	Chr3	53445753	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B10,B29,B74
typical_cds_rare	Chr3	53445766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B129,B138,B68,B98,D11
typical_cds_rare	Chr3	53445786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C74
typical_cds_rare	Chr3	53445793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B100,B24
lof_cds	Chr3	53445796	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	9	A1,A7,B101,B108,B14,B29,C2,C81,D3
lof_cds	Chr3	53445822	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B126,B51
typical_cds_rare	Chr3	53445822	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B126,B51
typical_cds_rare	Chr3	53445853	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	B55,B95,C24,C73,C78
typical_cds_rare	Chr3	53446370	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B121,B58,B87,C31
typical_cds_rare	Chr3	53446410	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B104
typical_cds_rare	Chr3	53446421	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B108
typical_cds_rare	Chr3	53446465	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B140,C72
typical_cds_rare	Chr3	53446479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B20,D5
lof_cds	Chr3	53446500	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	20	A22,A24,B100,B112,B119,B122,B137,B20,B22,B28,B31,B68,B69,B85,B97,C1,C63,C67,D11,D8
typical_cds_rare	Chr3	53446506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C8
lof_cds	Chr3	53446518	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	8	B113,B118,B32,B46,C60,C63,C74,C9
typical_cds_rare	Chr3	53446547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C3
typical_cds_rare	Chr3	53446584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C59
typical_cds_rare	Chr3	53446646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C33
typical_cds_rare	Chr3	53446667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	D9
typical_cds_rare	Chr3	53446691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B22,C72
typical_cds_rare	Chr3	53446708	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B21,B95,C28,C74
typical_cds_rare	Chr3	53446711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B22,C72
typical_cds_rare	Chr3	53446833	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B28,B60,C2
typical_cds_rare	Chr3	53446871	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B125,B50,C7
typical_cds_rare	Chr3	53446877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B9
typical_cds_rare	Chr3	53446902	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	5	A1,B29,C18,C5,C8
typical_cds_rare	Chr3	53446911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B29
typical_cds_rare	Chr3	53446921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C53
typical_cds_rare	Chr3	53446936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B125,B42,B61,B8
lof_cds	Chr3	53446937	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	12	A1,A20,B131,B29,B33,B53,C18,C36,C5,C8,C81,D7
typical_cds_rare	Chr3	53447009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	B140,C72
typical_cds_rare	Chr3	53447018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B126,B51,C71
typical_cds_rare	Chr3	53447042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B69
typical_cds_rare	Chr3	53447062	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B20
typical_cds_rare	Chr3	53447088	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	2	C53,C73
typical_cds_rare	Chr3	53447090	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B21,C28,C38,C74
typical_cds_rare	Chr3	53447114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	3	B21,C28,C74
typical_cds_rare	Chr3	53447122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	B32
typical_cds_rare	Chr3	53447160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	D10
typical_cds_rare	Chr3	53447199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B89,C16,C3,D4
typical_cds_rare	Chr3	53447360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	1	C65
typical_cds_rare	Chr3	53447367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131018989	SmilChr03G003487	131018989	rna-XM_057947673.1	4	B9,C22,C25,D4