source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	54155774	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	108	A1,A14,A2,A22,A25,A3,A7,A9,B10,B101,B103,B105,B106,B107,B108,B109,B111,B114,B117,B119,B12,B120,B121,B123,B124,B126,B127,B132,B133,B14,B18,B19,B25,B29,B3,B30,B33,B38,B39,B40,B41,B47,B49,B5,B52,B53,B55,B56,B59,B6,B63,B65,B67,B69,B7,B70,B72,B73,B74,B76,B78,B8,B81,B85,B89,B9,B90,B91,B92,B95,B96,B98,C10,C11,C13,C15,C16,C17,C2,C20,C24,C32,C34,C36,C37,C38,C39,C4,C40,C41,C46,C47,C49,C56,C58,C61,C65,C67,C68,C69,C71,C72,C74,C8,C82,C85,D7,D9
lof_cds	Chr3	54155778	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A24,B42,B43,B44,B82
typical_cds_rare	Chr3	54155778	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A24,B42,B43,B44,B82
lof_cds	Chr3	54155781	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	160	A10,A11,A13,A15,A16,A19,A2,A20,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B104,B105,B110,B112,B114,B120,B121,B123,B125,B127,B129,B13,B132,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B2,B20,B21,B23,B26,B27,B28,B31,B32,B34,B36,B37,B4,B40,B41,B44,B45,B46,B48,B5,B50,B51,B52,B53,B54,B56,B58,B59,B60,B61,B62,B63,B64,B69,B7,B71,B8,B81,B82,B83,B84,B86,B87,B89,B93,B94,B96,B97,B98,B99,C1,C11,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C24,C25,C27,C29,C30,C31,C33,C34,C35,C38,C40,C42,C43,C44,C48,C5,C50,C51,C54,C55,C57,C58,C6,C60,C61,C62,C63,C64,C65,C66,C67,C69,C7,C70,C71,C73,C75,C77,C78,C79,C80,C81,C83,C84,C85,C87,C9,D10,D11,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	54155784	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	B127,B40,B67,C46,C50
typical_cds_rare	Chr3	54155784	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	B127,B40,B67,C46,C50
lof_cds	Chr3	54155858	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	180	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B100,B104,B105,B107,B108,B110,B112,B114,B118,B120,B121,B123,B125,B127,B129,B13,B131,B132,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B2,B20,B21,B23,B24,B26,B27,B28,B3,B31,B32,B34,B36,B37,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B56,B57,B58,B59,B60,B61,B62,B63,B64,B66,B69,B7,B71,B76,B8,B81,B82,B83,B84,B86,B87,B89,B9,B93,B94,B96,B97,B98,C1,C11,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C27,C29,C30,C31,C33,C34,C35,C38,C40,C41,C42,C43,C44,C48,C5,C50,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C69,C7,C70,C71,C73,C75,C77,C78,C79,C80,C81,C83,C84,C85,C87,C9,D10,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	54155865	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	8	B34,B37,B63,B83,C48,C64,C66,D6
lof_cds	Chr3	54155877	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	17	A18,A21,A4,B100,B113,B126,B24,B33,B35,B42,B43,B57,C16,C45,C52,D1,D2
lof_cds	Chr3	54155886	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	180	A1,A10,A11,A13,A15,A16,A18,A19,A2,A20,A22,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B100,B104,B105,B107,B108,B110,B112,B114,B118,B120,B121,B123,B125,B127,B129,B13,B131,B132,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B2,B20,B21,B23,B24,B26,B27,B28,B3,B31,B32,B34,B36,B37,B4,B40,B41,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B56,B57,B58,B59,B60,B61,B62,B63,B64,B66,B69,B7,B71,B8,B81,B82,B83,B84,B86,B87,B88,B89,B9,B93,B94,B96,B97,B98,C1,C11,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C27,C29,C30,C31,C33,C34,C35,C38,C40,C41,C42,C43,C44,C48,C5,C50,C51,C52,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C69,C7,C70,C71,C73,C75,C77,C78,C79,C80,C81,C82,C83,C84,C85,C87,C9,D10,D11,D3,D4,D5,D6,D8,D9
typical_cds_rare	Chr3	54156000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B49
typical_cds_rare	Chr3	54156003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	3	B4,B51,B97
typical_cds_rare	Chr3	54156054	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B75
typical_cds_rare	Chr3	54156087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	2	B46,C8
typical_cds_rare	Chr3	54156215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	A4
typical_cds_rare	Chr3	54157316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	C60
typical_cds_rare	Chr3	54157403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	2	B91,D10
typical_cds_rare	Chr3	54157605	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B136
typical_cds_rare	Chr3	54157626	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	A25
typical_cds_rare	Chr3	54157767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A10,C13,C27,C58,C85
typical_cds_rare	Chr3	54157768	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A10,C13,C27,C58,C85
typical_cds_rare	Chr3	54157909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	C85
typical_cds_rare	Chr3	54157925	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A24,B42,B43,B44,B82
typical_cds_rare	Chr3	54157981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	2	B10,C22
typical_cds_rare	Chr3	54158351	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B136
typical_cds_rare	Chr3	54158480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B136
typical_cds_rare	Chr3	54158540	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	2	A4,D2
typical_cds_rare	Chr3	54158561	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	C71
typical_cds_rare	Chr3	54158650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	B131
typical_cds_rare	Chr3	54158670	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	5	A24,B42,B43,B44,B82
typical_cds_rare	Chr3	54158738	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014432	SmilChr03G003550	131014432	rna-XM_057942413.1	1	D11