source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	54476505	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C18
typical_cds_rare	Chr3	54476515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B129,B2,C87,D4
typical_cds_rare	Chr3	54476538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B28
typical_cds_rare	Chr3	54476539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B1,C23,D2
typical_cds_rare	Chr3	54476540	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B28,C42,D11
typical_cds_rare	Chr3	54476548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B114
typical_cds_rare	Chr3	54476554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B69
typical_cds_rare	Chr3	54476568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B3,B87,C39,D9
typical_cds_rare	Chr3	54476572	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	D10
typical_cds_rare	Chr3	54476574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B104
typical_cds_rare	Chr3	54476575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B1,B69,C78,D2
typical_cds_rare	Chr3	54476580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	A6,B11,B137,C21,C4
typical_cds_rare	Chr3	54476583	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B101
typical_cds_rare	Chr3	54476585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	A24,B137,C18,C6
typical_cds_rare	Chr3	54476593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C47
typical_cds_rare	Chr3	54476596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C6
typical_cds_rare	Chr3	54476598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	A6,B137,B23,C21,C4
typical_cds_rare	Chr3	54476602	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	A18
typical_cds_rare	Chr3	54476604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	C18,C6
typical_cds_rare	Chr3	54476608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C6
lof_cds	Chr3	54476609	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	9	B100,B104,B107,B120,B67,B75,B87,C2,C27
lof_cds	Chr3	54476613	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	8	B100,B104,B107,B120,B67,B75,B87,C2
typical_cds_rare	Chr3	54476614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B16,B88,C19,C45,D8
typical_cds_rare	Chr3	54476636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B102,B42,B43,B95,C47
typical_cds_rare	Chr3	54476637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	A6,B15,B23,C21
typical_cds_rare	Chr3	54476647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	A6,B23,C21
typical_cds_rare	Chr3	54476667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	B127,C70
typical_cds_rare	Chr3	54476693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B16,B69,C67
typical_cds_rare	Chr3	54476712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C37
lof_cds	Chr3	54476725	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	69	A1,A7,A8,B105,B110,B111,B117,B122,B127,B128,B130,B135,B140,B18,B19,B2,B29,B30,B31,B34,B37,B38,B4,B40,B42,B43,B45,B52,B55,B59,B65,B68,B7,B89,B90,B92,C11,C12,C14,C26,C29,C3,C30,C36,C4,C43,C45,C46,C48,C5,C50,C6,C61,C62,C64,C67,C69,C70,C76,C77,C78,C83,C84,C87,C9,D2,D3,D6,D8
typical_cds_rare	Chr3	54476733	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B23,B28,B31,B62
typical_cds_rare	Chr3	54476745	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B1
typical_cds_rare	Chr3	54476766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B130,B140,C29,C30
typical_cds_rare	Chr3	54476774	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B19,B21,C79
typical_cds_rare	Chr3	54476812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	C33,C35
typical_cds_rare	Chr3	54476818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B29,B82,C8
typical_cds_rare	Chr3	54476852	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B12
lof_cds	Chr3	54476920	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B53
typical_cds_rare	Chr3	54476920	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B53
typical_cds_rare	Chr3	54476967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B106,B31,B4,B80,C30
typical_cds_rare	Chr3	54477012	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	B64,C9
typical_cds_rare	Chr3	54477044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B136
typical_cds_rare	Chr3	54477049	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C75
lof_cds	Chr3	54477055	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B136
typical_cds_rare	Chr3	54477055	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B136
lof_cds	Chr3	54477073	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	20	B1,B101,B12,B122,B133,B23,B26,B60,B98,B99,C1,C12,C16,C17,C29,C40,C48,C58,C59,C8
typical_cds_rare	Chr3	54477084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C69
typical_cds_rare	Chr3	54477089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	C69,C72
typical_cds_rare	Chr3	54477096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C69
typical_cds_rare	Chr3	54477104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B126,B64,C9
typical_cds_rare	Chr3	54477122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	A16,B109,B135,B48,B73
typical_cds_rare	Chr3	54477123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B100,B115,B35,C41,C83
typical_cds_rare	Chr3	54477125	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	A14,B29,C21
typical_cds_rare	Chr3	54477131	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	B128,C67
typical_cds_rare	Chr3	54477137	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B56,B64,B96,C54,C71
typical_cds_rare	Chr3	54477140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B114,C4,C41,C81,C84
lof_cds	Chr3	54477151	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	A15,B94
typical_cds_rare	Chr3	54477151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	A15,B94
typical_cds_rare	Chr3	54477214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	A7,B11,B73,C13,C61
typical_cds_rare	Chr3	54477230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B100
typical_cds_rare	Chr3	54477247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C67
typical_cds_rare	Chr3	54477606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	B21,D6
typical_cds_rare	Chr3	54477614	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B21
typical_cds_rare	Chr3	54477633	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B83
typical_cds_rare	Chr3	54477634	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C76
typical_cds_rare	Chr3	54477638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B17,B96,C3
typical_cds_rare	Chr3	54477641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	C76
typical_cds_rare	Chr3	54477652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	5	B19,C16,C19,C31,C5
typical_cds_rare	Chr3	54477653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	4	B125,B15,B52,C68
typical_cds_rare	Chr3	54477659	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B30,B47,C16
typical_cds_rare	Chr3	54477665	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B15,B26,C68
typical_cds_rare	Chr3	54477672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B138,B35,B81
lof_cds	Chr3	54477683	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	15	A1,A14,B1,B124,B42,B44,B55,B56,B64,B96,C23,C3,C4,C69,D11
lof_cds	Chr3	54477725	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	88	A1,A14,A15,A16,A2,A23,A24,A3,A5,A7,A8,A9,B10,B102,B103,B105,B109,B110,B113,B118,B119,B120,B123,B130,B131,B133,B134,B135,B16,B17,B18,B23,B25,B27,B29,B3,B33,B37,B38,B39,B5,B50,B54,B55,B57,B59,B65,B68,B73,B76,B77,B79,B8,B83,B88,B96,B98,C13,C14,C15,C16,C19,C2,C20,C28,C29,C32,C35,C37,C38,C39,C42,C44,C47,C51,C55,C57,C58,C59,C6,C68,C82,C85,C9,D1,D11,D4,D6
typical_cds_rare	Chr3	54477733	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	1	B26
typical_cds_rare	Chr3	54477918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	2	B44,D11
lof_cds	Chr3	54477931	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B11,B121,D3
typical_cds_rare	Chr3	54477931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019005	SmilChr03G003584	131019005	rna-XM_057947692.1	3	B11,B121,D3