source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	54486881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B132,B59,B86,C25,C6
typical_cds_rare	Chr3	54486914	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B104,B140,B24,B67,C35
typical_cds_rare	Chr3	54486920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B132,B59,B86,C25,C6
typical_cds_rare	Chr3	54486943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	C55,C8
typical_cds_rare	Chr3	54486949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	B37
lof_cds	Chr3	54486979	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	17	A4,B114,B14,B22,B27,B28,B46,B47,B52,B6,B64,B73,C34,C68,C73,D3,D4
typical_cds_rare	Chr3	54486995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	B82
typical_cds_rare	Chr3	54487061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	D11
typical_cds_rare	Chr3	54487097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B137,B139,B32,C4,C48
typical_cds_rare	Chr3	54488074	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	D11
typical_cds_rare	Chr3	54488127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	B140
lof_cds	Chr3	54488373	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	4	B110,C28,C30,C58
typical_cds_rare	Chr3	54488373	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	4	B110,C28,C30,C58
typical_cds_rare	Chr3	54488455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	B72,C50
lof_cds	Chr3	54488456	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	16	A19,A25,A5,B1,B10,B133,B134,B15,B74,B75,B84,C40,C41,C45,C72,C80
typical_cds_rare	Chr3	54488473	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	B102,C20
lof_cds	Chr3	54488475	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	4	A18,B26,B72,C50
typical_cds_rare	Chr3	54488475	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	4	A18,B26,B72,C50
lof_cds	Chr3	54488483	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	B108,B81
typical_cds_rare	Chr3	54488483	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	B108,B81
typical_cds_rare	Chr3	54488484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	B38,D11
typical_cds_rare	Chr3	54488487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	1	A22
typical_cds_rare	Chr3	54488497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	2	C61,C8
lof_cds	Chr3	54488499	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	9	A2,B100,B112,B17,B49,B62,B85,C11,C52
typical_cds_rare	Chr3	54488515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B104,B129,B81,C31,C58
lof_cds	Chr3	54488537	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	29	A2,A20,B1,B105,B107,B114,B122,B123,B17,B24,B33,B47,B49,B51,B60,B64,B79,B87,B94,C15,C16,C18,C19,C23,C36,C39,C52,C61,C75
typical_cds_rare	Chr3	54488554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	A21,B136,B25,B81,C82
lof_cds	Chr3	54488754	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	17	A5,B105,B122,B123,B137,B14,B32,B33,B79,B8,C19,C37,C39,C40,C52,C55,C60
typical_cds_rare	Chr3	54488803	TG	*	INDEL	1bp_deletion	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B105,B97,C37,C40,C52
typical_cds_rare	Chr3	54488805	GC	*	INDEL	1bp_deletion	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	4	B105,B97,C40,C52
typical_cds_rare	Chr3	54488806	CT	*	INDEL	1bp_deletion	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B105,B97,C33,C40,C52
lof_cds	Chr3	54488807	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	19	A14,A21,A9,B105,B119,B12,B126,B140,B20,B22,B26,B37,B43,B51,B58,B6,B7,B70,C5
typical_cds_rare	Chr3	54488809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019006	SmilChr03G003585	131019006	rna-XM_057947693.1	5	B1,B53,C2,C55,C80