source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	54599645	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B32
lof_cds	Chr3	54599656	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	6	A21,B24,B35,B83,C32,C68
typical_cds_rare	Chr3	54600112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	3	B19,B75,C15
lof_cds	Chr3	54600119	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	151	A10,A14,A20,A21,A24,A5,A8,A9,B10,B100,B101,B102,B103,B104,B106,B107,B108,B11,B111,B114,B117,B118,B119,B12,B121,B125,B126,B128,B13,B130,B131,B133,B136,B138,B139,B14,B15,B16,B17,B2,B20,B22,B23,B25,B27,B29,B3,B31,B32,B33,B34,B37,B38,B39,B40,B41,B42,B43,B47,B48,B49,B5,B50,B52,B53,B56,B57,B58,B59,B61,B62,B63,B64,B65,B66,B67,B68,B69,B71,B75,B76,B78,B80,B82,B85,B87,B88,B89,B90,B92,B93,B94,B96,B97,B98,B99,C10,C12,C2,C20,C21,C22,C25,C27,C28,C29,C3,C32,C33,C34,C38,C39,C40,C41,C44,C46,C48,C49,C50,C51,C53,C54,C55,C56,C57,C58,C6,C60,C61,C62,C64,C65,C66,C67,C68,C7,C77,C81,C83,C84,C87,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	54600121	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	151	A10,A14,A20,A21,A24,A5,A8,A9,B10,B100,B101,B102,B103,B104,B106,B107,B108,B11,B111,B114,B117,B118,B119,B12,B121,B125,B126,B128,B13,B130,B131,B133,B136,B138,B139,B14,B15,B16,B17,B2,B20,B22,B23,B25,B27,B29,B3,B31,B32,B33,B34,B37,B38,B39,B40,B41,B42,B43,B47,B48,B49,B5,B50,B52,B53,B56,B57,B58,B59,B61,B62,B63,B64,B65,B66,B67,B68,B69,B71,B75,B76,B78,B80,B82,B85,B87,B88,B89,B90,B92,B93,B94,B96,B97,B98,B99,C10,C12,C2,C20,C21,C22,C25,C27,C28,C29,C3,C32,C33,C34,C38,C39,C40,C41,C44,C46,C48,C49,C50,C51,C53,C54,C55,C56,C57,C58,C6,C60,C61,C62,C64,C65,C66,C67,C68,C7,C77,C81,C83,C84,C87,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr3	54600181	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	12	A10,B10,B107,B131,B133,B23,B3,B33,B40,C39,C7,D2
typical_cds_rare	Chr3	54600202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	A15
lof_cds	Chr3	54600279	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	14	A2,B110,B113,B115,B137,B94,C14,C20,C25,C3,C37,C4,C5,C65
lof_cds	Chr3	54600305	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	78	A10,A11,A14,A15,A19,B1,B106,B109,B111,B119,B12,B123,B129,B133,B137,B138,B139,B15,B17,B2,B25,B27,B3,B30,B37,B4,B40,B44,B45,B47,B5,B60,B64,B65,B67,B69,B71,B81,B83,B84,B88,B9,B91,B93,B99,C1,C12,C15,C16,C17,C19,C22,C27,C33,C34,C36,C41,C42,C46,C52,C53,C54,C56,C59,C6,C64,C65,C66,C71,C77,C83,C84,C86,C87,C9,D1,D11,D5
typical_cds_rare	Chr3	54600350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	B66,D9
typical_cds_rare	Chr3	54600356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B100
typical_cds_rare	Chr3	54600398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	C9,D11
typical_cds_rare	Chr3	54600425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	5	A4,B140,B42,B43,B63
lof_cds	Chr3	54600427	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	156	A1,A10,A14,A16,A20,A24,A5,A8,A9,B1,B10,B100,B101,B102,B103,B104,B106,B107,B108,B11,B110,B111,B117,B118,B119,B12,B121,B125,B126,B128,B13,B130,B131,B133,B136,B138,B139,B14,B15,B16,B17,B2,B20,B22,B23,B25,B27,B29,B3,B31,B32,B33,B34,B36,B37,B39,B40,B41,B42,B43,B44,B47,B48,B49,B5,B50,B51,B52,B53,B56,B57,B58,B59,B61,B62,B63,B64,B65,B66,B67,B68,B69,B71,B75,B77,B78,B80,B82,B83,B85,B87,B88,B89,B90,B92,B93,B94,B96,B97,B98,B99,C10,C12,C15,C2,C20,C21,C22,C23,C25,C27,C28,C3,C32,C33,C34,C38,C39,C40,C41,C44,C48,C49,C50,C52,C53,C54,C55,C56,C57,C58,C6,C60,C61,C62,C64,C66,C67,C68,C7,C74,C77,C81,C83,C84,C87,D1,D10,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr3	54600461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	C12,C31
typical_cds_rare	Chr3	54600469	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	C12,C31
lof_cds	Chr3	54600484	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	12	B111,B12,B120,B125,B134,B140,B33,B4,B55,B60,C56,C72
typical_cds_rare	Chr3	54600517	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	B78,C64
typical_cds_rare	Chr3	54600522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	D9
lof_cds	Chr3	54600533	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	44	A15,B106,B119,B123,B129,B133,B137,B139,B17,B2,B27,B30,B37,B40,B44,B45,B47,B60,B65,B71,B81,B84,B91,B93,B99,C1,C17,C19,C22,C27,C34,C36,C41,C52,C53,C54,C56,C64,C66,C71,C83,C86,D1,D5
lof_cds	Chr3	54600566	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	13	A15,B129,B2,B30,B37,B45,B47,B65,B81,B84,B91,C22,C27
lof_cds	Chr3	54600662	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	11	A11,A19,A20,B16,B19,B66,B68,B90,B92,C52,C59
typical_cds_rare	Chr3	54600676	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B82
typical_cds_rare	Chr3	54600683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	4	B132,B28,B74,C73
typical_cds_rare	Chr3	54600820	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B5
typical_cds_rare	Chr3	54600878	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	3	B132,C32,C68
typical_cds_rare	Chr3	54600879	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	B117,C27
typical_cds_rare	Chr3	54600889	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B9
lof_cds	Chr3	54600908	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B29
typical_cds_rare	Chr3	54600908	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B29
typical_cds_rare	Chr3	54600932	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	2	B12,B44
lof_cds	Chr3	54601008	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	66	A1,A10,A11,A18,A19,A6,A7,B102,B103,B105,B107,B109,B112,B118,B123,B126,B130,B132,B137,B138,B139,B140,B16,B2,B25,B29,B34,B36,B4,B44,B5,B59,B6,B61,B66,B69,B71,B76,B83,B87,B9,B94,B95,B97,B98,C14,C16,C17,C21,C27,C3,C46,C50,C52,C61,C62,C63,C67,C74,C8,C83,D11,D3,D4,D5,D7
lof_cds	Chr3	54601029	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B50
typical_cds_rare	Chr3	54601029	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B50
lof_cds	Chr3	54601038	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B93
typical_cds_rare	Chr3	54601038	G	GAC	INDEL	2bp_insertion	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	B93
typical_cds_rare	Chr3	54601061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	4	B131,B78,C2,D10
typical_cds_rare	Chr3	54601066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	3	A1,C27,C83
lof_cds	Chr3	54601139	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	6	A10,A21,B24,C17,C33,C54
lof_cds	Chr3	54601147	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	7	A11,B44,B45,C15,C41,C54,C84
typical_cds_rare	Chr3	54601174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014474	SmilChr03G003596	131014474	rna-XM_057942468.1	1	D10