source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	54609135	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B12,B120,C32
typical_cds_rare	Chr3	54609145	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B140,B6,C19,C48
lof_cds	Chr3	54609148	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B28,B8
typical_cds_rare	Chr3	54609148	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B28,B8
typical_cds_rare	Chr3	54609149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B24,B89
typical_cds_rare	Chr3	54609156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	A16,C81
typical_cds_rare	Chr3	54609169	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B30,B64,C27,C61
lof_cds	Chr3	54609178	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	A1,C41
typical_cds_rare	Chr3	54609178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	A1,C41
typical_cds_rare	Chr3	54609179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B72,C41
typical_cds_rare	Chr3	54609188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B30,B44,B64,C61
typical_cds_rare	Chr3	54609189	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B20,B39,C35
typical_cds_rare	Chr3	54609194	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	A20,A3,B47
typical_cds_rare	Chr3	54609200	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B22,C10,C41
typical_cds_rare	Chr3	54609201	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B38,B53,C68
lof_cds	Chr3	54609217	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	8	A15,A16,B140,B34,B51,C36,C65,C68
typical_cds_rare	Chr3	54609222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B38,B53,C68
typical_cds_rare	Chr3	54609236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B1,C67
typical_cds_rare	Chr3	54609265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B40,C8
typical_cds_rare	Chr3	54609285	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B74,B78,B91,C62
lof_cds	Chr3	54609287	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	A25,B100,B24,C87
typical_cds_rare	Chr3	54609287	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	A25,B100,B24,C87
lof_cds	Chr3	54609304	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	58	A13,A20,A7,A8,B10,B102,B103,B107,B108,B109,B114,B125,B127,B135,B137,B139,B18,B25,B31,B32,B37,B4,B40,B41,B42,B48,B58,B60,B66,B68,B71,B8,B82,B84,B86,B87,C10,C14,C19,C22,C23,C24,C27,C29,C3,C34,C41,C43,C53,C69,C74,C77,C79,C82,C84,C9,D1,D5
typical_cds_rare	Chr3	54609324	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B42
typical_cds_rare	Chr3	54609333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	A11,C52,C60
lof_cds	Chr3	54609340	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	A11,B111,B48,C51
typical_cds_rare	Chr3	54609340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	A11,B111,B48,C51
lof_cds	Chr3	54609349	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	6	B25,B51,C50,C59,C73,C8
lof_cds	Chr3	54609361	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	12	A19,A4,B117,B123,B129,B79,B94,C23,C56,C57,C81,D6
typical_cds_rare	Chr3	54609376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	A10,B43
lof_cds	Chr3	54609388	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	8	B12,B138,B15,B27,B48,C25,C50,C83
lof_cds	Chr3	54609390	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B82,B92
typical_cds_rare	Chr3	54609390	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B82,B92
typical_cds_rare	Chr3	54609395	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	A22
typical_cds_rare	Chr3	54609397	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B36,B90,B92,C49
typical_cds_rare	Chr3	54609398	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B12
typical_cds_rare	Chr3	54609399	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	A13,B104,B47,B82,C61
lof_cds	Chr3	54609409	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	B38,B39,C15,C39,D7
typical_cds_rare	Chr3	54609409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	B38,B39,C15,C39,D7
typical_cds_rare	Chr3	54609423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	A8,B103,B75,B96
typical_cds_rare	Chr3	54609426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B137
lof_cds	Chr3	54609430	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	13	A18,B119,B123,B136,B14,B44,B70,B79,B82,B9,B95,C36,C58
lof_cds	Chr3	54609431	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	29	A11,A16,A21,A23,B101,B104,B111,B127,B128,B138,B14,B28,B31,B32,B49,B5,B56,B57,B85,B88,B93,C11,C2,C24,C44,C50,C51,C58,C69
lof_cds	Chr3	54609434	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	11	A18,B119,B123,B136,B14,B44,B70,B79,B9,B95,C58
typical_cds_rare	Chr3	54609451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B133,C6
lof_cds	Chr3	54609476	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B86,C12
typical_cds_rare	Chr3	54609476	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B86,C12
typical_cds_rare	Chr3	54609514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B49,C55,C65,D8
lof_cds	Chr3	54609538	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	11	B36,B67,B99,C16,C34,C42,C59,C64,C66,D1,D6
typical_cds_rare	Chr3	54609540	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B112,B29,B89
typical_cds_rare	Chr3	54609575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B49,C29,C32
typical_cds_rare	Chr3	54609577	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B49,C38,C39
typical_cds_rare	Chr3	54609590	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	A22,B117,B49
typical_cds_rare	Chr3	54609596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B133,B83,C6
typical_cds_rare	Chr3	54609772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B104,B3,C79
typical_cds_rare	Chr3	54609788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B2,B78,C6,C66
lof_cds	Chr3	54609807	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B39,C82
typical_cds_rare	Chr3	54609807	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B39,C82
typical_cds_rare	Chr3	54609855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B100,B16,D8
lof_cds	Chr3	54609867	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	15	A1,A11,A7,B132,B44,B57,B62,B8,B84,C12,C20,C25,C40,C77,C84
typical_cds_rare	Chr3	54609885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B64,C6
typical_cds_rare	Chr3	54609891	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	D4
lof_cds	Chr3	54609892	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	C60
typical_cds_rare	Chr3	54609892	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	C60
typical_cds_rare	Chr3	54609894	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B55,C2,D10
typical_cds_rare	Chr3	54609896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B37,B77,C10,C20
typical_cds_rare	Chr3	54609929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	A10,B23,B38,B4,C44
typical_cds_rare	Chr3	54609944	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B55,C2
typical_cds_rare	Chr3	54609956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B44,C3,C70
typical_cds_rare	Chr3	54609969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	A16,C29,C3,C62,C70
typical_cds_rare	Chr3	54609970	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	4	B61,B91,C15,C80
typical_cds_rare	Chr3	54609988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	5	B41,B61,B64,B91,C80
typical_cds_rare	Chr3	54609992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B64
typical_cds_rare	Chr3	54609998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B17,B78
lof_cds	Chr3	54610005	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B71,C11,C86
typical_cds_rare	Chr3	54610005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	3	B71,C11,C86
lof_cds	Chr3	54610060	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B91
typical_cds_rare	Chr3	54610060	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	B91
typical_cds_rare	Chr3	54610061	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	2	B57,B91
typical_cds_rare	Chr3	54610093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019010	SmilChr03G003598	131019010	rna-XM_057947695.1	1	C79