source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	55416869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	B52,C61
typical_cds_rare	Chr3	55416871	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C37
typical_cds_rare	Chr3	55416897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B32,C23,C55,D8
lof_cds	Chr3	55416898	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B104
typical_cds_rare	Chr3	55416898	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B104
lof_cds	Chr3	55416913	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	B108,C56
typical_cds_rare	Chr3	55416913	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	B108,C56
typical_cds_rare	Chr3	55416936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	3	B34,B37,C35
lof_cds	Chr3	55416943	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	38	A1,A2,A20,A25,A9,B108,B110,B115,B119,B12,B124,B126,B14,B25,B27,B41,B45,B49,B51,B55,B71,B79,B80,B89,B97,C10,C29,C33,C4,C45,C60,C7,C70,C74,C85,C87,D11,D3
typical_cds_rare	Chr3	55416971	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B104
typical_cds_rare	Chr3	55416986	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B139
typical_cds_rare	Chr3	55416993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A22
typical_cds_rare	Chr3	55417012	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	B42,B43,B44,B61,C38
lof_cds	Chr3	55417017	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	46	A1,A11,A2,A20,A25,A9,B100,B101,B108,B110,B112,B114,B115,B119,B12,B124,B126,B27,B41,B45,B48,B49,B51,B55,B61,B65,B71,B79,B80,B82,B88,B89,B97,C10,C21,C29,C33,C4,C45,C60,C70,C74,C85,C87,D11,D3
lof_cds	Chr3	55417026	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	152	A1,A11,A14,A19,A2,A20,A24,A25,A6,A9,B1,B10,B100,B101,B103,B104,B105,B106,B108,B109,B110,B111,B112,B114,B115,B119,B12,B120,B124,B125,B126,B128,B129,B131,B132,B133,B134,B136,B139,B14,B140,B15,B18,B19,B2,B26,B27,B28,B3,B30,B31,B32,B35,B37,B4,B41,B42,B44,B45,B46,B47,B48,B49,B50,B51,B52,B55,B59,B61,B64,B65,B66,B69,B71,B72,B74,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B87,B88,B89,B90,B91,B92,B94,B97,B99,C10,C11,C12,C15,C18,C2,C21,C23,C24,C26,C27,C29,C31,C32,C33,C35,C37,C38,C39,C4,C40,C41,C42,C45,C46,C48,C49,C51,C54,C55,C56,C57,C58,C59,C60,C63,C68,C69,C70,C71,C74,C76,C77,C8,C80,C82,C84,C85,C86,C87,C9,D1,D11,D3,D5,D8,D9
lof_cds	Chr3	55417029	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	152	A1,A11,A14,A19,A2,A20,A24,A25,A6,A9,B1,B10,B100,B101,B103,B104,B105,B106,B108,B109,B110,B111,B112,B114,B115,B119,B12,B120,B124,B125,B126,B128,B129,B131,B132,B133,B134,B136,B139,B14,B140,B15,B18,B19,B2,B26,B27,B28,B3,B30,B31,B32,B35,B37,B4,B41,B42,B44,B45,B46,B47,B48,B49,B50,B51,B52,B55,B59,B61,B64,B65,B66,B69,B71,B72,B74,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B87,B88,B89,B90,B91,B92,B94,B97,B99,C10,C11,C12,C15,C18,C2,C21,C23,C24,C26,C27,C29,C31,C32,C33,C35,C37,C38,C39,C4,C40,C41,C42,C45,C46,C48,C49,C51,C54,C55,C56,C57,C58,C59,C60,C63,C68,C69,C70,C71,C74,C76,C77,C8,C80,C82,C84,C85,C86,C87,C9,D1,D11,D3,D5,D8,D9
typical_cds_rare	Chr3	55417033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	A18,B35
typical_cds_rare	Chr3	55417047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	A24,B28,B46,D3
lof_cds	Chr3	55417064	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	11	A1,B129,B132,B14,B2,B37,B72,B87,B94,C12,D1
typical_cds_rare	Chr3	55417091	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C85
typical_cds_rare	Chr3	55417096	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B136,B52,C40,C61
typical_cds_rare	Chr3	55417180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
lof_cds	Chr3	55417188	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417188	CGG	C	INDEL	2bp_deletion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417189	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	A14,B133,B50,C39
typical_cds_rare	Chr3	55417192	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	B74,C65
typical_cds_rare	Chr3	55417193	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417200	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	B38,B39,B41,C10,C74
typical_cds_rare	Chr3	55417220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	3	B77,C37,C77
lof_cds	Chr3	55417232	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	19	A1,A14,B129,B131,B132,B133,B139,B14,B2,B37,B44,B50,B72,B87,B91,B94,C27,C39,D1
typical_cds_rare	Chr3	55417258	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B32,C23,C55,D8
typical_cds_rare	Chr3	55417294	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	3	B108,C23,C45
typical_cds_rare	Chr3	55417308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B2,B53,B8,C54
typical_cds_rare	Chr3	55417321	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B104
typical_cds_rare	Chr3	55417322	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417356	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B46
typical_cds_rare	Chr3	55417369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	B42,B43,B44,B61,C38
typical_cds_rare	Chr3	55417386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B104
typical_cds_rare	Chr3	55417396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B22
typical_cds_rare	Chr3	55417409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B133,B93,C39,C65
typical_cds_rare	Chr3	55417422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B80
typical_cds_rare	Chr3	55417469	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	4	B32,C23,C55,D8
typical_cds_rare	Chr3	55417487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	3	B131,B91,C45
typical_cds_rare	Chr3	55417503	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B106
typical_cds_rare	Chr3	55417537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C55
typical_cds_rare	Chr3	55417548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C55
typical_cds_rare	Chr3	55417597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C65
typical_cds_rare	Chr3	55417634	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A22
typical_cds_rare	Chr3	55417711	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A22
lof_cds	Chr3	55417724	G	GA	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	31	A24,B106,B108,B109,B112,B12,B120,B126,B134,B28,B47,B64,B71,B77,B81,B83,B87,B99,C23,C33,C41,C49,C56,C60,C63,C68,C74,C8,C82,C87,D5
typical_cds_rare	Chr3	55417748	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B91
typical_cds_rare	Chr3	55417755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C72
lof_cds	Chr3	55417778	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417778	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
lof_cds	Chr3	55417810	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417810	G	GAC	INDEL	2bp_insertion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
lof_cds	Chr3	55417819	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417819	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	B42,B43,B44,B61,C38
typical_cds_rare	Chr3	55417845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	A20,B100,B41,C60,C74
typical_cds_rare	Chr3	55417851	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	A20
typical_cds_rare	Chr3	55417869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C9
typical_cds_rare	Chr3	55417923	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	B99
typical_cds_rare	Chr3	55418069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	5	A10,B112,B22,C58,C85
typical_cds_rare	Chr3	55418098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	D7
typical_cds_rare	Chr3	55418145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	A15,C42
typical_cds_rare	Chr3	55418171	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	2	B123,D6
typical_cds_rare	Chr3	55418284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	1	C55
lof_cds	Chr3	55418306	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131019024	SmilChr03G003659	131019024	rna-XM_057947712.1	6	A1,B112,B65,C55,C63,C79