source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	55679635	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
typical_cds_rare	Chr3	55679635	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
lof_cds	Chr3	55679638	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
typical_cds_rare	Chr3	55679638	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
typical_cds_rare	Chr3	55679648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B113,C41,C74
typical_cds_rare	Chr3	55679682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B103,B66
typical_cds_rare	Chr3	55679688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B103,B66
typical_cds_rare	Chr3	55679692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B114
typical_cds_rare	Chr3	55679765	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	4	A21,B132,B91,C35
typical_cds_rare	Chr3	55679769	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B53,B66,C10
typical_cds_rare	Chr3	55679772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
typical_cds_rare	Chr3	55679779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C75
typical_cds_rare	Chr3	55679822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C83
lof_cds	Chr3	55679904	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	39	A1,A23,A4,B1,B102,B106,B109,B112,B125,B13,B133,B136,B15,B25,B38,B55,B56,B59,B75,B77,B89,B96,B99,C14,C19,C2,C23,C24,C32,C34,C4,C50,C54,C55,C59,C68,C77,C82,D9
typical_cds_rare	Chr3	55679906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B98
lof_cds	Chr3	55679920	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B86,B9
typical_cds_rare	Chr3	55679920	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B86,B9
typical_cds_rare	Chr3	55679922	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C66
typical_cds_rare	Chr3	55679926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	A11,B78
typical_cds_rare	Chr3	55679930	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	A1,C68,C83
lof_cds	Chr3	55679990	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	57	A14,A20,A23,A3,B104,B110,B119,B126,B127,B18,B19,B20,B23,B24,B28,B29,B31,B34,B36,B37,B38,B41,B42,B43,B44,B5,B6,B7,B76,B80,B85,B86,C13,C18,C21,C3,C37,C4,C44,C45,C47,C5,C52,C54,C56,C6,C61,C62,C65,C66,C71,C77,C80,C82,C83,D2,D6
typical_cds_rare	Chr3	55680007	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	C48,C54,C87
typical_cds_rare	Chr3	55680016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B47,C49
lof_cds	Chr3	55680030	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	23	A10,A16,A7,B1,B101,B111,B117,B135,B26,B40,B6,B68,B71,B75,C18,C20,C22,C30,C43,C44,C53,C69,D5
lof_cds	Chr3	55680070	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B104,B20,B66,B9,C50
typical_cds_rare	Chr3	55680070	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B104,B20,B66,B9,C50
lof_cds	Chr3	55680077	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	4	B20,B66,B9,C50
typical_cds_rare	Chr3	55680077	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	4	B20,B66,B9,C50
typical_cds_rare	Chr3	55680078	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	4	B20,B66,B9,C50
typical_cds_rare	Chr3	55680087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B20,B66,B9,C50,C84
typical_cds_rare	Chr3	55680196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B93
typical_cds_rare	Chr3	55680204	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	4	B10,B113,C41,C74
typical_cds_rare	Chr3	55680227	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B102
typical_cds_rare	Chr3	55680232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B41,D11
lof_cds	Chr3	55680250	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
typical_cds_rare	Chr3	55680250	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
lof_cds	Chr3	55680254	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
typical_cds_rare	Chr3	55680254	GGC	G	INDEL	2bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
lof_cds	Chr3	55680265	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
typical_cds_rare	Chr3	55680265	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,C17,D5
typical_cds_rare	Chr3	55680312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	C11,C69
typical_cds_rare	Chr3	55680386	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B85,C12,C37
typical_cds_rare	Chr3	55680410	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B40,C40
typical_cds_rare	Chr3	55680428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B67,C66
typical_cds_rare	Chr3	55680462	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C66
typical_cds_rare	Chr3	55680484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B134,B56,B87,B93,B96
lof_cds	Chr3	55680494	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,B64,C30
typical_cds_rare	Chr3	55680494	ATG	A	INDEL	2bp_deletion	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	3	B24,B64,C30
lof_cds	Chr3	55680571	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D7
typical_cds_rare	Chr3	55680571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D7
typical_cds_rare	Chr3	55680579	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D11
typical_cds_rare	Chr3	55680630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B114
typical_cds_rare	Chr3	55680637	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B8
typical_cds_rare	Chr3	55680672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B67
lof_cds	Chr3	55680768	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	7	A11,A25,B106,B45,B67,B98,C70
typical_cds_rare	Chr3	55680780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B136
typical_cds_rare	Chr3	55680797	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	B67,C46
typical_cds_rare	Chr3	55680823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B102,B15,B19,C17,D11
lof_cds	Chr3	55680913	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	12	B103,B112,B12,B51,C1,C23,C31,C57,C83,D11,D4,D9
lof_cds	Chr3	55680943	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	17	B105,B113,B115,B136,B26,B31,B36,B69,B78,B97,C20,C3,C44,C53,C77,C81,D2
typical_cds_rare	Chr3	55681023	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	2	A11,B67
lof_cds	Chr3	55681055	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	14	A13,A16,A20,A5,B110,B21,B50,B60,B62,B68,B88,C12,C14,C37
typical_cds_rare	Chr3	55681066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	D4
typical_cds_rare	Chr3	55681084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C48
typical_cds_rare	Chr3	55681097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	5	B110,B135,C80,C83,D7
typical_cds_rare	Chr3	55681113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B110
lof_cds	Chr3	55681142	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	61	A7,A9,B109,B11,B111,B124,B128,B130,B132,B136,B14,B15,B19,B23,B25,B26,B3,B30,B35,B37,B41,B51,B55,B56,B65,B72,B73,B80,B83,B85,B86,B88,B95,B96,B99,C10,C16,C20,C21,C24,C27,C3,C31,C33,C39,C4,C41,C43,C45,C46,C53,C54,C65,C7,C73,C79,C81,C84,C86,D2,D7
typical_cds_rare	Chr3	55681149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B110
typical_cds_rare	Chr3	55681166	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	C3
typical_cds_rare	Chr3	55681191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B110
typical_cds_rare	Chr3	55681212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B110
typical_cds_rare	Chr3	55681213	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019029	SmilChr03G003683	131019029	rna-XM_057947714.1	1	B110