source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	56212807	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942592.1,rna-XM_057942593.1	47	A11,A13,A16,A19,A24,A9,B107,B11,B111,B118,B123,B132,B134,B138,B14,B17,B2,B24,B32,B34,B35,B36,B45,B52,B54,B64,B65,B75,B77,B80,B86,B93,B95,C19,C26,C27,C3,C32,C46,C61,C63,C68,C71,C76,C78,C79,C81
lof_cds	Chr3	56212941	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	3	B117,B140,C27
typical_cds_rare	Chr3	56212941	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	3	B117,B140,C27
lof_cds	Chr3	56212952	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	99	A1,A14,A15,A16,A18,A21,A22,A23,A3,A5,A7,A8,B1,B10,B103,B109,B114,B115,B119,B12,B129,B13,B133,B134,B136,B137,B20,B23,B26,B27,B29,B3,B37,B38,B39,B4,B40,B41,B42,B43,B44,B48,B50,B51,B57,B59,B60,B62,B68,B69,B7,B71,B73,B75,B76,B8,B85,B87,B88,B9,B94,B97,B98,B99,C1,C13,C14,C15,C2,C24,C29,C33,C37,C38,C40,C42,C43,C44,C48,C49,C50,C52,C54,C55,C58,C62,C72,C77,C79,C80,C82,C83,C86,C87,C9,D1,D10,D11,D9
typical_cds_rare	Chr3	56212994	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	1	A2
typical_cds_rare	Chr3	56213021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	2	B90,B92
lof_cds	Chr3	56213026	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	4	B1,B101,B17,D8
typical_cds_rare	Chr3	56213026	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	4	B1,B101,B17,D8
lof_cds	Chr3	56213033	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	100	A1,A14,A15,A16,A18,A21,A22,A23,A3,A5,A7,A8,B1,B10,B103,B109,B114,B115,B119,B12,B129,B13,B133,B134,B136,B137,B20,B23,B26,B27,B29,B3,B31,B37,B38,B39,B4,B40,B41,B42,B43,B44,B48,B50,B51,B57,B59,B60,B62,B68,B69,B7,B71,B73,B75,B76,B8,B85,B87,B88,B9,B94,B97,B98,B99,C1,C13,C14,C15,C2,C24,C29,C33,C37,C38,C40,C42,C43,C44,C48,C49,C50,C52,C54,C55,C58,C62,C72,C77,C79,C80,C82,C83,C86,C87,C9,D1,D10,D11,D9
lof_cds	Chr3	56213039	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	160	A1,A13,A14,A15,A16,A18,A20,A21,A22,A23,A3,A5,A6,A7,A8,B1,B10,B100,B101,B103,B104,B106,B107,B108,B109,B112,B113,B114,B115,B119,B12,B125,B126,B129,B13,B130,B133,B134,B136,B137,B139,B15,B16,B20,B21,B23,B26,B27,B29,B3,B30,B31,B33,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B47,B48,B5,B50,B51,B55,B57,B59,B60,B62,B66,B68,B69,B7,B70,B71,B72,B73,B75,B76,B8,B80,B81,B84,B85,B87,B88,B9,B90,B92,B94,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C2,C22,C24,C25,C28,C29,C30,C32,C33,C37,C38,C39,C4,C40,C41,C42,C43,C44,C47,C48,C49,C50,C52,C53,C54,C55,C56,C57,C58,C59,C60,C62,C66,C68,C69,C72,C73,C74,C77,C79,C8,C80,C82,C83,C84,C86,C87,C9,D1,D10,D11,D2,D7,D9
lof_cds	Chr3	56213042	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1	153	A10,A11,A13,A16,A19,A2,A24,A3,A4,A6,A9,B1,B101,B104,B105,B107,B108,B109,B11,B110,B111,B113,B114,B115,B117,B118,B119,B121,B122,B123,B124,B127,B130,B131,B132,B134,B135,B138,B14,B140,B16,B17,B18,B19,B2,B20,B22,B24,B26,B28,B32,B33,B34,B35,B36,B37,B4,B40,B42,B43,B44,B45,B46,B48,B49,B51,B52,B53,B54,B56,B57,B58,B6,B60,B61,B63,B64,B65,B67,B70,B74,B75,B77,B78,B79,B8,B80,B81,B82,B83,B86,B89,B91,B93,B94,B95,B96,B99,C10,C11,C13,C15,C19,C21,C23,C25,C26,C27,C29,C3,C30,C31,C32,C33,C34,C36,C37,C39,C4,C41,C44,C45,C46,C47,C5,C51,C52,C53,C58,C61,C63,C64,C66,C68,C69,C7,C70,C71,C72,C75,C76,C78,C79,C8,C81,C85,D10,D3,D4,D5,D6,D8,D9
lof_cds	Chr3	56213082	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	1	D4
typical_cds_rare	Chr3	56213082	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	1	D4
typical_cds_rare	Chr3	56213105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	3	B122,B19,B78
typical_cds_rare	Chr3	56213127	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	2	A24,C8
typical_cds_rare	Chr3	56213188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1	4	A16,B32,B35,B64
typical_cds_rare	Chr3	56213812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	3	B122,B19,B78
typical_cds_rare	Chr3	56213931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	1	B100
typical_cds_rare	Chr3	56213940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	1	D10
typical_cds_rare	Chr3	56214837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	4	A22,B76,B9,C38
typical_cds_rare	Chr3	56214886	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	3	B117,B140,C27
typical_cds_rare	Chr3	56215124	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	3	B122,B19,B78
typical_cds_rare	Chr3	56215238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014583	SmilChr03G003720	131014583	rna-XM_057942591.1,rna-XM_057942592.1,rna-XM_057942593.1	1	B119