source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	56475150	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	B140
lof_cds	Chr3	56475155	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B12,C9
typical_cds_rare	Chr3	56475155	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B12,C9
typical_cds_rare	Chr3	56475159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	5	A6,B35,B47,B55,B94
typical_cds_rare	Chr3	56475173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B12,C2
lof_cds	Chr3	56475190	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	C2,C35
typical_cds_rare	Chr3	56475190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	C2,C35
typical_cds_rare	Chr3	56475231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	B111,C18,C20
typical_cds_rare	Chr3	56475264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B91,C21
lof_cds	Chr3	56475280	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	5	A2,B51,B76,B84,C15
typical_cds_rare	Chr3	56475280	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	5	A2,B51,B76,B84,C15
typical_cds_rare	Chr3	56475309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B35,C47
typical_cds_rare	Chr3	56475334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	5	A6,B108,B111,B97,C20
typical_cds_rare	Chr3	56475420	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B102,B91
lof_cds	Chr3	56475454	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C75
typical_cds_rare	Chr3	56475454	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C75
typical_cds_rare	Chr3	56475499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B54,B9
typical_cds_rare	Chr3	56475537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B102,B91
typical_cds_rare	Chr3	56475558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	B75,C54,C79
typical_cds_rare	Chr3	56475564	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B102,B91
typical_cds_rare	Chr3	56475574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	B140
typical_cds_rare	Chr3	56475729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	B42,B43,C83
lof_cds	Chr3	56475806	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	B111,B52,C61
typical_cds_rare	Chr3	56475806	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	B111,B52,C61
lof_cds	Chr3	56475808	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	26	A20,A3,A8,B103,B127,B136,B21,B26,B37,B58,B59,B69,B71,B72,B9,C1,C11,C16,C22,C25,C52,C69,C7,C80,C84,C85
lof_cds	Chr3	56475849	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	103	A1,A11,A18,A20,A21,A22,A25,A3,A7,A8,A9,B1,B101,B103,B104,B107,B108,B110,B111,B115,B123,B124,B126,B128,B130,B133,B134,B138,B140,B18,B19,B21,B23,B26,B31,B34,B38,B39,B40,B41,B47,B5,B53,B54,B57,B59,B62,B64,B65,B69,B73,B76,B78,B8,B80,B85,B86,B89,B9,B91,B94,B96,B99,C1,C11,C13,C14,C16,C18,C22,C23,C27,C29,C3,C30,C31,C34,C35,C38,C40,C41,C43,C44,C48,C49,C53,C54,C55,C59,C6,C60,C63,C65,C67,C71,C75,C76,C79,C80,D11,D5,D7,D9
lof_cds	Chr3	56475858	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	104	A1,A11,A18,A20,A21,A22,A25,A3,A7,A8,A9,B1,B101,B103,B104,B107,B108,B110,B111,B115,B122,B123,B124,B126,B128,B130,B133,B134,B138,B140,B18,B19,B21,B23,B26,B31,B34,B38,B39,B40,B41,B47,B5,B53,B54,B57,B59,B62,B64,B65,B69,B73,B76,B78,B8,B80,B85,B86,B89,B9,B91,B94,B96,B99,C1,C11,C13,C14,C16,C18,C22,C23,C26,C27,C29,C3,C31,C34,C35,C38,C40,C41,C43,C44,C48,C49,C53,C54,C59,C6,C60,C63,C65,C67,C71,C75,C76,C79,C80,C9,D11,D5,D7,D9
lof_cds	Chr3	56475880	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
typical_cds_rare	Chr3	56475880	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56475882	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	216	A1,A11,A14,A16,A18,A19,A2,A20,A21,A22,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B103,B104,B106,B107,B108,B109,B110,B111,B112,B113,B114,B115,B118,B119,B12,B121,B122,B123,B124,B126,B127,B128,B129,B13,B130,B131,B133,B134,B136,B138,B14,B140,B15,B18,B19,B21,B23,B24,B25,B26,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B62,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B82,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B98,B99,C1,C11,C13,C14,C15,C16,C17,C18,C19,C2,C20,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C50,C51,C52,C53,C54,C55,C56,C58,C59,C6,C60,C61,C62,C63,C65,C67,C68,C69,C7,C70,C71,C72,C74,C75,C76,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D4,D5,D7,D9
typical_cds_rare	Chr3	56475920	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56475937	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C27
typical_cds_rare	Chr3	56475937	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C27
typical_cds_rare	Chr3	56475965	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56476007	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	18	A16,A4,A6,B106,B113,B126,B131,B15,B33,B6,B81,B87,B99,C17,C20,C51,C70,D1
lof_cds	Chr3	56476013	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
typical_cds_rare	Chr3	56476013	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56476017	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	15	A16,A4,A6,B106,B131,B15,B33,B6,B87,B99,C17,C20,C51,C70,D1
lof_cds	Chr3	56476018	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	37	A16,A19,A2,A20,A3,A8,B100,B103,B111,B118,B127,B136,B21,B25,B26,B52,B58,B59,B69,B71,B84,B85,B9,C1,C11,C16,C21,C25,C5,C52,C61,C69,C7,C80,C84,C86,D8
lof_cds	Chr3	56476041	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	14	A4,A6,B106,B113,B131,B33,B6,B87,B99,C17,C20,C51,C70,D1
lof_cds	Chr3	56476043	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
typical_cds_rare	Chr3	56476043	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56476044	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	13	A4,A6,B106,B113,B131,B33,B6,B87,B99,C17,C20,C51,C70
lof_cds	Chr3	56476053	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	12	A4,A6,B106,B33,B6,B87,B99,C17,C20,C38,C51,C70
typical_cds_rare	Chr3	56476115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	4	A4,B106,B113,B6
typical_cds_rare	Chr3	56476123	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C52
typical_cds_rare	Chr3	56476151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	3	A4,B106,B6
typical_cds_rare	Chr3	56476156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56476163	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C54
typical_cds_rare	Chr3	56476163	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C54
typical_cds_rare	Chr3	56476165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	2	B125,C73
lof_cds	Chr3	56481098	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	13	A22,B104,B109,B120,B139,B54,B73,C18,C2,C48,C68,D7,D9
lof_cds	Chr3	56481099	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	12	A22,B104,B120,B139,B54,B73,C18,C2,C48,C68,D7,D9
typical_cds_rare	Chr3	56481114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	1	C38
lof_cds	Chr3	56481163	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131014607	SmilChr03G003743	131014607	rna-XM_057942634.1	17	A19,A20,B103,B118,B21,B37,B69,B71,B72,C1,C11,C16,C22,C25,C69,C80,C84