source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	56668413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B90,B92
typical_cds_rare	Chr3	56668414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B137,C41
typical_cds_rare	Chr3	56668419	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B137,C41
lof_cds	Chr3	56668440	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	14	B102,B125,B134,B140,B47,B67,B90,B92,C2,C21,C32,C41,C74,D1
typical_cds_rare	Chr3	56668499	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B66
typical_cds_rare	Chr3	56668527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	A5
typical_cds_rare	Chr3	56668612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B69,D10
typical_cds_rare	Chr3	56668615	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B33,B53
typical_cds_rare	Chr3	56668720	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B66
typical_cds_rare	Chr3	56668721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	C53,C60
typical_cds_rare	Chr3	56668728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C60
typical_cds_rare	Chr3	56668738	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B117,C27
typical_cds_rare	Chr3	56668743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C33
typical_cds_rare	Chr3	56668791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C23
typical_cds_rare	Chr3	56668807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	A14,B57,C47,D2,D6
typical_cds_rare	Chr3	56668818	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B51,B67
typical_cds_rare	Chr3	56668830	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B109
lof_cds	Chr3	56668840	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	62	A15,A22,A25,A6,A8,A9,B1,B103,B107,B11,B111,B113,B118,B124,B126,B132,B135,B139,B14,B16,B18,B27,B28,B5,B51,B52,B54,B59,B60,B61,B67,B68,B70,B77,B79,B82,B84,B89,B96,C11,C13,C18,C2,C21,C26,C3,C39,C4,C40,C42,C45,C48,C5,C50,C55,C69,C75,C80,C82,C84,C86,D9
typical_cds_rare	Chr3	56668868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B126,D10
typical_cds_rare	Chr3	56668878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	A19,B45,B80
typical_cds_rare	Chr3	56668927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B29
lof_cds	Chr3	56668971	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	7	A10,B118,B132,B36,B52,B77,C26
typical_cds_rare	Chr3	56668972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	C43,C80,D7
lof_cds	Chr3	56668974	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	7	B102,B129,B131,B47,B92,C41,C74
typical_cds_rare	Chr3	56668984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	C2,C41,C74
typical_cds_rare	Chr3	56668986	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C37
typical_cds_rare	Chr3	56668997	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B57,C55,D2,D6
lof_cds	Chr3	56669048	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	9	B1,B101,B135,B58,B7,B78,B8,C31,C42
lof_cds	Chr3	56669058	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B137,B21
typical_cds_rare	Chr3	56669058	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B137,B21
typical_cds_rare	Chr3	56669637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	A24
typical_cds_rare	Chr3	56669638	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B84,B88,C28,C82
typical_cds_rare	Chr3	56669673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B94,C27
lof_cds	Chr3	56669677	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B25,B73,C16,C20
typical_cds_rare	Chr3	56669677	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B25,B73,C16,C20
typical_cds_rare	Chr3	56669704	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B25,B5,C18,C39
typical_cds_rare	Chr3	56669749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B117,B47,C27
typical_cds_rare	Chr3	56669768	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B4,B67,C4
typical_cds_rare	Chr3	56669776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	A4,B40,C35,C76
typical_cds_rare	Chr3	56669781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	C63,C70
typical_cds_rare	Chr3	56669788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	A24,B55,C4,C76,C86
typical_cds_rare	Chr3	56669791	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B10,B121,B4,B98,C81
lof_cds	Chr3	56669831	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	6	A23,B117,B82,B83,B85,D2
typical_cds_rare	Chr3	56669841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B122,B129,B83
typical_cds_rare	Chr3	56669846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B89,B91,C34,C70,D2
typical_cds_rare	Chr3	56669860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B21,C15,C42,D10,D4
typical_cds_rare	Chr3	56669867	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B103,C20
lof_cds	Chr3	56669868	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B35,B52,B68,C73
typical_cds_rare	Chr3	56669868	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B35,B52,B68,C73
typical_cds_rare	Chr3	56669876	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	A18,B88
typical_cds_rare	Chr3	56669901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	A9,D1
typical_cds_rare	Chr3	56669907	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B49,B82,C35,D6
typical_cds_rare	Chr3	56669912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C67
typical_cds_rare	Chr3	56669921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B12,C2
typical_cds_rare	Chr3	56669923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	A5,B12
typical_cds_rare	Chr3	56669927	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B104
lof_cds	Chr3	56669937	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B43,B51,B60
typical_cds_rare	Chr3	56669937	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B43,B51,B60
typical_cds_rare	Chr3	56669942	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B59,B82,C58
typical_cds_rare	Chr3	56669947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B115,B65,B71
typical_cds_rare	Chr3	56669974	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	A23,C65,C70
typical_cds_rare	Chr3	56669979	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B10,B47,C50,C55,C86
typical_cds_rare	Chr3	56669982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B126,B33,B69,C29
lof_cds	Chr3	56669994	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	48	A1,A11,A13,A19,A4,A7,B114,B119,B120,B124,B126,B14,B19,B20,B24,B26,B27,B28,B30,B33,B38,B39,B46,B54,B57,B60,B67,B73,B76,B9,C1,C12,C14,C19,C22,C25,C29,C45,C5,C53,C57,C63,C7,C77,C8,C80,C83,C86
lof_cds	Chr3	56669995	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B14,B83,C59
typical_cds_rare	Chr3	56669995	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B14,B83,C59
lof_cds	Chr3	56670022	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	13	A21,B108,B12,B137,B25,B80,C2,C31,C49,C56,C65,C70,D5
typical_cds_rare	Chr3	56670031	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B27,B57
typical_cds_rare	Chr3	56670043	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	C32,C68
typical_cds_rare	Chr3	56670048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B14,B38,B76,C29
typical_cds_rare	Chr3	56670073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B51,C10,C83,C87,D10
typical_cds_rare	Chr3	56670084	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B77,B91
typical_cds_rare	Chr3	56670102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B29,C24
lof_cds	Chr3	56670110	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B118,C35
typical_cds_rare	Chr3	56670110	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B118,C35
typical_cds_rare	Chr3	56670119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B104
typical_cds_rare	Chr3	56670138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	C23,C40
lof_cds	Chr3	56670149	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	29	A14,A21,B11,B117,B123,B134,B19,B20,B28,B37,B5,B68,B75,B88,B93,B96,C1,C11,C14,C25,C38,C50,C55,C59,C69,C80,D2,D5,D9
typical_cds_rare	Chr3	56670169	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B115,B137,B20,C18,C44
typical_cds_rare	Chr3	56670195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	A22,B54,B75,C12,C72
typical_cds_rare	Chr3	56670221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	B104
typical_cds_rare	Chr3	56670235	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B1,B99,C30
lof_cds	Chr3	56670264	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	7	B138,B31,B71,B72,B73,B8,C58
lof_cds	Chr3	56670273	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	11	A21,B108,B12,B2,B25,B65,C31,C56,C70,C86,D4
lof_cds	Chr3	56670292	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	33	A1,A21,B108,B11,B12,B123,B127,B132,B138,B19,B2,B44,B48,B55,B65,B90,B92,C1,C12,C15,C23,C31,C32,C46,C48,C49,C55,C57,C61,C70,C75,D4,D9
lof_cds	Chr3	56670318	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	27	A16,A19,B105,B110,B122,B123,B139,B18,B29,B39,B44,B48,B54,B56,B68,B7,B83,B97,C24,C25,C46,C47,C54,C59,C75,C81,C9
typical_cds_rare	Chr3	56670322	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B60,C58,D3
typical_cds_rare	Chr3	56670330	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	C11,C38
typical_cds_rare	Chr3	56670343	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B69,C65
typical_cds_rare	Chr3	56670356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B47,C63
typical_cds_rare	Chr3	56670360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	3	B12,B55,C82
typical_cds_rare	Chr3	56670363	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	4	B94,C14,C15,C25
typical_cds_rare	Chr3	56670391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	2	B29,C25
typical_cds_rare	Chr3	56670418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	5	B100,B125,B79,C16,D3
typical_cds_rare	Chr3	56670494	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014616	SmilChr03G003756	131014616	rna-XM_057942638.1	1	C72