source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	57011379	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	8	A13,B134,B34,B38,B39,B65,B86,C49
lof_cds	Chr3	57011388	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B4
typical_cds_rare	Chr3	57011388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B4
typical_cds_rare	Chr3	57011390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B79,C58,C9
typical_cds_rare	Chr3	57011404	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	A4,B85,C81
typical_cds_rare	Chr3	57011460	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B66,C40
typical_cds_rare	Chr3	57011522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	C8
typical_cds_rare	Chr3	57011621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B2,C45,C83
typical_cds_rare	Chr3	57011635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	B2,B24,C38,C46,C62
typical_cds_rare	Chr3	57011636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B135
typical_cds_rare	Chr3	57011653	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57011750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B68,B99,C14,C44
typical_cds_rare	Chr3	57011751	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B90,B92,C77,D5
typical_cds_rare	Chr3	57011752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	C45
typical_cds_rare	Chr3	57011764	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	A23,A3
typical_cds_rare	Chr3	57011776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B20,B28,C42,C63
typical_cds_rare	Chr3	57011797	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	A23,A3,B38,B73,B75
typical_cds_rare	Chr3	57011872	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B95,C43,C45,D11
typical_cds_rare	Chr3	57011959	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B110
typical_cds_rare	Chr3	57012028	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B110,C5
typical_cds_rare	Chr3	57012199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	A3,C23,C33,C43
lof_cds	Chr3	57012306	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	67	A10,A11,A2,A20,A22,A23,A3,A6,A8,B101,B102,B103,B105,B112,B113,B114,B118,B126,B127,B132,B137,B139,B14,B15,B21,B22,B27,B31,B33,B36,B37,B44,B49,B51,B52,B57,B6,B61,B66,B71,B72,B77,B81,B82,B84,B9,C15,C16,C17,C22,C25,C26,C34,C35,C45,C5,C51,C6,C69,C7,C71,C80,C82,C84,D1,D7,D8
typical_cds_rare	Chr3	57012365	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	B112,B117,B16,C59,D8
typical_cds_rare	Chr3	57012367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57012377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	C40,C7
typical_cds_rare	Chr3	57012405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	B10,B136,C27,C38,C52
typical_cds_rare	Chr3	57012407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	A16
typical_cds_rare	Chr3	57012523	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B2,B56,C50
lof_cds	Chr3	57014573	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1	160	A11,A14,A16,A18,A19,A2,A21,A22,A24,A25,A4,A5,A8,A9,B100,B102,B103,B104,B105,B107,B109,B110,B111,B112,B115,B117,B118,B119,B12,B120,B121,B122,B123,B125,B128,B129,B13,B131,B133,B134,B135,B136,B138,B139,B15,B16,B17,B18,B20,B24,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B35,B36,B41,B42,B43,B44,B45,B46,B47,B52,B53,B55,B58,B59,B60,B62,B63,B64,B68,B69,B7,B70,B74,B75,B78,B79,B80,B81,B82,B83,B85,B87,B89,B9,B90,B91,B92,B93,B98,B99,C10,C11,C12,C14,C16,C18,C19,C2,C20,C21,C23,C24,C25,C27,C28,C3,C31,C32,C35,C36,C37,C39,C42,C44,C45,C47,C48,C49,C5,C50,C51,C52,C57,C58,C59,C6,C60,C61,C63,C64,C66,C67,C68,C69,C70,C73,C74,C76,C77,C78,C8,C81,C87,C9,D2,D3,D5,D6,D8,D9
lof_cds	Chr3	57014574	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1	5	A9,B2,B56,C50,C83
typical_cds_rare	Chr3	57014574	G	GCC	INDEL	2bp_insertion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1	5	A9,B2,B56,C50,C83
lof_cds	Chr3	57014686	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	100	A10,A15,A16,A18,A20,A5,A6,A9,B1,B10,B105,B107,B111,B122,B124,B125,B127,B130,B134,B135,B136,B138,B17,B18,B19,B2,B23,B24,B26,B29,B3,B34,B37,B40,B45,B46,B47,B48,B5,B50,B51,B53,B54,B56,B58,B6,B64,B66,B67,B7,B71,B76,B78,B79,B81,B86,B88,B91,B94,B95,B96,C1,C10,C13,C14,C21,C24,C27,C29,C30,C36,C37,C38,C43,C48,C49,C50,C52,C54,C55,C62,C63,C64,C66,C67,C70,C72,C73,C75,C76,C78,C79,C82,C83,C86,C87,D1,D11,D3,D4
lof_cds	Chr3	57014690	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	89	A10,A15,A18,A20,A5,A6,A9,B1,B105,B111,B122,B124,B125,B127,B130,B135,B136,B138,B17,B18,B19,B2,B23,B24,B26,B29,B34,B37,B40,B45,B46,B47,B48,B5,B50,B51,B53,B54,B56,B58,B6,B66,B67,B7,B71,B76,B78,B79,B81,B86,B88,B91,B94,B95,B96,C1,C10,C13,C14,C21,C24,C27,C29,C30,C36,C37,C48,C49,C52,C54,C55,C62,C63,C64,C66,C67,C70,C72,C73,C76,C78,C79,C82,C86,C87,D1,D11,D3,D4
lof_cds	Chr3	57014694	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	13	A19,A7,B1,B101,B130,B30,B40,B73,B80,C22,C40,C57,C74
typical_cds_rare	Chr3	57014714	GA	*	INDEL	1bp_deletion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	B104,B108,B2,C50,C83
lof_cds	Chr3	57014723	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	6	B11,B17,B34,B38,B5,C49
lof_cds	Chr3	57014724	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	110	A10,A11,A19,A2,A20,A22,A23,A24,A3,A7,A8,A9,B1,B10,B100,B101,B102,B103,B105,B106,B109,B11,B112,B113,B118,B12,B120,B123,B127,B130,B131,B132,B133,B137,B139,B14,B15,B19,B2,B22,B27,B30,B33,B36,B40,B44,B49,B51,B52,B53,B55,B57,B6,B61,B63,B66,B68,B69,B71,B72,B73,B74,B77,B8,B80,B81,B82,B84,B85,B89,B9,B93,B94,B95,B99,C1,C11,C14,C17,C19,C21,C22,C23,C25,C26,C29,C31,C33,C34,C35,C37,C4,C40,C43,C51,C57,C6,C69,C7,C71,C74,C79,C8,C80,C82,C84,C86,D10,D11,D8
lof_cds	Chr3	57014735	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	20	A13,A16,A18,B134,B136,B17,B26,B34,B38,B39,B46,B5,B58,B59,B65,B86,C27,C48,C49,C52
typical_cds_rare	Chr3	57014739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	A16,B104,B140,D6
typical_cds_rare	Chr3	57014742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B2
lof_cds	Chr3	57023749	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B16,C38,C83
typical_cds_rare	Chr3	57023749	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B16,C38,C83
typical_cds_rare	Chr3	57023822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B93
typical_cds_rare	Chr3	57023843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B85,C41,C81
lof_cds	Chr3	57023909	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B38,B86
typical_cds_rare	Chr3	57023909	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B38,B86
typical_cds_rare	Chr3	57023913	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	3	B95,C43,C79
lof_cds	Chr3	57023915	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	62	A19,A21,A5,A6,A7,B1,B101,B111,B112,B117,B121,B122,B13,B130,B16,B17,B18,B29,B3,B30,B35,B37,B40,B54,B57,B63,B71,B73,B76,B79,B80,B81,B83,B86,B88,B91,B93,B94,C11,C21,C22,C24,C29,C32,C36,C39,C40,C45,C53,C57,C59,C68,C69,C70,C74,C76,C82,C86,C87,D10,D2,D8
lof_cds	Chr3	57023918	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	61	A19,A21,A5,A6,A7,B1,B101,B111,B112,B117,B121,B122,B13,B130,B16,B17,B18,B29,B3,B30,B35,B37,B40,B54,B57,B63,B71,B73,B76,B79,B80,B81,B83,B86,B88,B91,B93,B94,C11,C21,C22,C24,C29,C32,C36,C39,C40,C53,C57,C59,C68,C69,C70,C74,C76,C82,C86,C87,D10,D2,D8
typical_cds_rare	Chr3	57023963	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B2,B3,B51,B94
lof_cds	Chr3	57024052	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B10
typical_cds_rare	Chr3	57024052	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B10
lof_cds	Chr3	57024086	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	6	B4,B75,C45,C53,D10,D11
lof_cds	Chr3	57024094	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	C45
typical_cds_rare	Chr3	57024094	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	C45
lof_cds	Chr3	57024129	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B81,C16
typical_cds_rare	Chr3	57024129	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	2	B81,C16
typical_cds_rare	Chr3	57024184	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	B75,C45,D10,D11
typical_cds_rare	Chr3	57024188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B10
typical_cds_rare	Chr3	57024191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	5	A16,B136,B46,B58,B64
typical_cds_rare	Chr3	57024329	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	4	A1,B41,C48,D7
typical_cds_rare	Chr3	57024347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	D10
lof_cds	Chr3	57024453	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57024453	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
lof_cds	Chr3	57024460	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57024460	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
lof_cds	Chr3	57024464	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57024464	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75
typical_cds_rare	Chr3	57024469	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131014645	SmilChr03G003792	131014645	rna-XM_057942684.1,rna-XM_057942685.1,rna-XM_057942686.1	1	B75