source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	57111676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	3	B130,B2,B96
typical_cds_rare	Chr3	57111695	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B95,C79
typical_cds_rare	Chr3	57111711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	4	B130,B2,C67,C72
typical_cds_rare	Chr3	57111715	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B4,B78
lof_cds	Chr3	57111740	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B42,B43
typical_cds_rare	Chr3	57111740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B42,B43
typical_cds_rare	Chr3	57111781	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B135
typical_cds_rare	Chr3	57111798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	4	B75,C45,D10,D11
typical_cds_rare	Chr3	57111828	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	3	B4,B47,C14
lof_cds	Chr3	57111912	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	10	A16,B136,B26,B59,B64,C27,C36,C39,C52,C69
typical_cds_rare	Chr3	57111963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B135
typical_cds_rare	Chr3	57111967	ATC	*	INDEL	2bp_deletion	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C7
typical_cds_rare	Chr3	57111975	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B93
lof_cds	Chr3	57111998	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	9	A1,B107,B108,B123,B3,B47,C12,C41,C56
typical_cds_rare	Chr3	57112012	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B135
typical_cds_rare	Chr3	57112081	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C45
typical_cds_rare	Chr3	57112110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B135
typical_cds_rare	Chr3	57112195	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	4	B19,B76,B85,D4
typical_cds_rare	Chr3	57112226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B4,B78
typical_cds_rare	Chr3	57112240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B40,D3
typical_cds_rare	Chr3	57112243	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C44
typical_cds_rare	Chr3	57112303	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	C38,C8
typical_cds_rare	Chr3	57112315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C77
typical_cds_rare	Chr3	57112360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B4,B78
typical_cds_rare	Chr3	57112381	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	B46
typical_cds_rare	Chr3	57112415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	3	B42,B43,C83
typical_cds_rare	Chr3	57112417	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B38,B78
typical_cds_rare	Chr3	57112549	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	B104,D6
typical_cds_rare	Chr3	57112615	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	C38,C8
lof_cds	Chr3	57112699	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	9	B102,B105,B109,B12,B131,B132,B55,B63,C51
typical_cds_rare	Chr3	57112809	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C45
typical_cds_rare	Chr3	57112822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	1	C40
lof_cds	Chr3	57112842	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	18	A14,B129,B136,B25,B29,B3,B34,B37,B60,B62,B70,C14,C29,C3,C59,C68,C9,D2
lof_cds	Chr3	57112845	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	14	A14,B136,B25,B29,B3,B34,B37,B60,B62,B70,C14,C59,C68,C9
lof_cds	Chr3	57113442	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	14	B104,B128,B135,B75,B76,B86,C14,C2,C40,C49,C57,C59,C61,D4
lof_cds	Chr3	57113444	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	14	B104,B128,B135,B75,B76,B86,C14,C2,C40,C49,C57,C59,C61,D4
lof_cds	Chr3	57113616	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	D10,D11
typical_cds_rare	Chr3	57113616	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	D10,D11
lof_cds	Chr3	57113620	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	D10,D11
typical_cds_rare	Chr3	57113620	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1,rna-XM_057942699.1	2	D10,D11
typical_cds_rare	Chr3	57113830	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	1	B93
lof_cds	Chr3	57114143	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	115	A13,A14,A15,A18,A19,A21,A25,A4,A5,A7,B102,B103,B104,B105,B109,B11,B110,B111,B115,B118,B119,B12,B120,B121,B122,B125,B128,B129,B131,B133,B134,B135,B136,B138,B18,B25,B28,B29,B3,B30,B32,B33,B34,B35,B36,B37,B42,B43,B44,B45,B46,B47,B50,B52,B54,B55,B57,B60,B62,B63,B7,B70,B71,B72,B76,B78,B83,B85,B86,B87,B88,B89,B90,B92,B98,C12,C14,C18,C2,C20,C23,C24,C28,C29,C3,C30,C31,C32,C33,C35,C36,C39,C40,C42,C47,C49,C51,C57,C58,C59,C6,C61,C62,C68,C7,C70,C73,C76,C82,C86,C87,C9,D11,D2,D4
lof_cds	Chr3	57114148	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	110	A13,A14,A15,A18,A19,A21,A25,A4,A5,A7,B102,B103,B104,B105,B109,B11,B110,B111,B115,B118,B119,B12,B120,B121,B122,B125,B128,B129,B131,B133,B134,B136,B138,B18,B25,B29,B3,B30,B32,B33,B34,B35,B36,B37,B42,B43,B44,B45,B47,B50,B52,B54,B55,B57,B60,B62,B63,B7,B70,B71,B72,B76,B78,B83,B85,B86,B87,B88,B89,B90,B92,B98,C12,C14,C18,C2,C20,C23,C24,C28,C29,C3,C30,C31,C32,C33,C35,C36,C39,C42,C47,C49,C51,C57,C58,C59,C6,C61,C62,C68,C70,C73,C76,C82,C86,C87,C9,D11,D2,D4
lof_cds	Chr3	57114154	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	107	A13,A14,A15,A18,A19,A21,A25,A4,A5,A7,B103,B104,B11,B110,B111,B115,B118,B119,B12,B120,B121,B122,B125,B128,B129,B133,B134,B135,B136,B138,B18,B25,B28,B29,B3,B30,B32,B33,B34,B35,B36,B37,B42,B43,B44,B45,B46,B47,B50,B52,B54,B55,B57,B60,B62,B7,B70,B71,B72,B76,B78,B83,B85,B86,B87,B88,B89,B90,B92,B98,C12,C14,C18,C2,C20,C23,C24,C28,C29,C3,C30,C31,C32,C33,C35,C36,C39,C42,C47,C49,C57,C58,C59,C6,C61,C62,C68,C70,C73,C76,C82,C86,C87,C9,D11,D2,D4
lof_cds	Chr3	57114158	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	91	A14,A15,A19,A21,A25,A4,A5,A7,B103,B110,B115,B118,B119,B12,B120,B121,B122,B125,B128,B129,B133,B136,B138,B18,B25,B28,B29,B3,B30,B32,B33,B35,B36,B37,B42,B43,B44,B45,B46,B47,B52,B54,B55,B57,B60,B62,B7,B70,B71,B72,B76,B83,B85,B87,B88,B89,B90,B92,B98,C12,C14,C20,C23,C24,C28,C30,C32,C33,C35,C36,C39,C42,C47,C49,C57,C58,C59,C6,C61,C62,C68,C70,C73,C76,C82,C86,C87,C9,D11,D2,D4
lof_cds	Chr3	57114254	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131014659	SmilChr03G003803	131014659	rna-XM_057942698.1	11	A23,A3,B108,B19,B4,B8,B97,C23,C33,C55,C77