source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	59138599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	C49
lof_cds	Chr3	59140944	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B3
typical_cds_rare	Chr3	59140944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B3
typical_cds_rare	Chr3	59140957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	D7
typical_cds_rare	Chr3	59140966	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B41
typical_cds_rare	Chr3	59140995	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B105
typical_cds_rare	Chr3	59141002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B53,C76
typical_cds_rare	Chr3	59141056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A20,B1,C79
typical_cds_rare	Chr3	59141058	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B111,B131,B27,C29
lof_cds	Chr3	59141068	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A21,B124,B64
typical_cds_rare	Chr3	59141068	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A21,B124,B64
typical_cds_rare	Chr3	59141069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A20,B1,C72
lof_cds	Chr3	59141072	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B82,C64,D7
typical_cds_rare	Chr3	59141072	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B82,C64,D7
typical_cds_rare	Chr3	59141089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	C83
typical_cds_rare	Chr3	59141100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B101,B15,B76,C7
typical_cds_rare	Chr3	59141104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B36,B72,C70,C83
lof_cds	Chr3	59141140	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	10	A21,A5,A9,B104,B126,B20,B64,C21,C87,D10
typical_cds_rare	Chr3	59141144	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B132,D4
typical_cds_rare	Chr3	59141165	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B37
typical_cds_rare	Chr3	59141170	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B129
typical_cds_rare	Chr3	59141174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B22
lof_cds	Chr3	59141178	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B129,B26,B96,C43
typical_cds_rare	Chr3	59141178	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B129,B26,B96,C43
typical_cds_rare	Chr3	59141182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B90,B92
typical_cds_rare	Chr3	59141188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	C43
typical_cds_rare	Chr3	59141194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	A14,B52,B55,C18
lof_cds	Chr3	59141209	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B13
typical_cds_rare	Chr3	59141209	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B13
typical_cds_rare	Chr3	59141218	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B24
typical_cds_rare	Chr3	59141223	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	A2,C65,C81,C84
typical_cds_rare	Chr3	59141228	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B129
typical_cds_rare	Chr3	59141232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B37,C63
typical_cds_rare	Chr3	59141234	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B140,C63,D2
typical_cds_rare	Chr3	59141237	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	C75
typical_cds_rare	Chr3	59141244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	A16,B140,B82,C5
lof_cds	Chr3	59141256	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	26	A14,A2,B105,B106,B109,B11,B118,B12,B125,B129,B140,B2,B55,B64,B67,B80,B84,C19,C33,C35,C4,C47,C65,C81,C84,C9
typical_cds_rare	Chr3	59141275	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A5,B80,C24
typical_cds_rare	Chr3	59141288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B27,C68,D11
typical_cds_rare	Chr3	59141293	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B41
lof_cds	Chr3	59141301	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	13	A19,B17,B66,B68,B71,B84,C21,C32,C48,C61,C68,C79,C86
lof_cds	Chr3	59141332	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	22	A19,A5,B111,B123,B2,B36,B6,B62,B63,B64,B7,B80,B83,B86,B91,B92,C24,C44,C56,C63,C67,C71
lof_cds	Chr3	59141333	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	11	B125,B131,B65,B72,B77,B96,C11,C19,C21,C36,C69
typical_cds_rare	Chr3	59141348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B81,B87
lof_cds	Chr3	59141358	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	10	A6,B107,B13,B25,B53,B90,B92,C20,C7,D9
lof_cds	Chr3	59141362	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	6	B107,B84,B98,C28,C30,C80
lof_cds	Chr3	59141363	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	151	A11,A13,A14,A15,A16,A2,A20,A21,A22,A23,A25,A3,A6,B100,B102,B103,B105,B106,B108,B109,B11,B110,B111,B112,B114,B118,B119,B12,B121,B122,B124,B125,B126,B128,B129,B130,B131,B135,B137,B14,B140,B15,B18,B19,B2,B20,B22,B23,B24,B27,B28,B3,B33,B34,B36,B37,B38,B4,B41,B42,B43,B44,B46,B47,B50,B52,B53,B55,B56,B59,B6,B60,B62,B63,B64,B66,B67,B7,B72,B73,B74,B75,B76,B77,B78,B80,B83,B85,B91,B92,B93,B94,B96,B99,C10,C11,C12,C13,C16,C18,C19,C2,C20,C21,C22,C23,C26,C27,C3,C30,C32,C33,C35,C36,C37,C38,C4,C43,C44,C45,C46,C47,C49,C5,C50,C52,C55,C56,C57,C60,C63,C65,C69,C71,C72,C73,C75,C78,C8,C81,C82,C83,C84,C86,C87,C9,D11,D2,D3,D5,D7
lof_cds	Chr3	59141364	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	A16
typical_cds_rare	Chr3	59141364	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	A16
lof_cds	Chr3	59141365	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	155	A11,A13,A14,A15,A16,A2,A20,A21,A22,A23,A25,A3,A6,B100,B102,B103,B105,B106,B107,B108,B109,B11,B110,B111,B112,B114,B118,B119,B12,B121,B122,B124,B125,B126,B128,B129,B130,B131,B135,B137,B14,B140,B15,B18,B19,B2,B20,B22,B23,B24,B27,B28,B3,B33,B34,B36,B37,B38,B4,B41,B42,B43,B44,B46,B47,B50,B52,B53,B55,B56,B59,B6,B60,B62,B63,B64,B66,B67,B7,B72,B73,B74,B75,B76,B77,B78,B80,B83,B84,B85,B91,B92,B93,B94,B96,B98,B99,C10,C11,C12,C13,C16,C18,C19,C2,C20,C21,C22,C23,C26,C27,C28,C3,C30,C32,C33,C35,C36,C37,C38,C4,C43,C44,C45,C46,C47,C49,C5,C50,C52,C55,C56,C57,C60,C63,C65,C69,C71,C72,C73,C75,C78,C8,C81,C82,C83,C84,C86,C87,C9,D11,D2,D3,D5,D7
typical_cds_rare	Chr3	59141368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B91
typical_cds_rare	Chr3	59141370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B101,C37
lof_cds	Chr3	59141380	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	116	A11,A13,A15,A16,A20,A21,A22,A23,A3,B102,B103,B107,B108,B109,B11,B110,B112,B114,B118,B119,B122,B125,B126,B128,B129,B130,B135,B140,B18,B19,B2,B20,B22,B23,B24,B27,B28,B3,B33,B34,B36,B37,B38,B4,B41,B42,B43,B44,B46,B47,B50,B52,B53,B55,B56,B60,B62,B66,B67,B7,B72,B75,B76,B78,B84,B85,B90,B93,B94,B96,B98,B99,C10,C11,C12,C13,C16,C18,C20,C21,C22,C23,C26,C3,C30,C33,C36,C37,C38,C4,C43,C45,C46,C49,C50,C52,C54,C57,C60,C61,C69,C71,C72,C73,C75,C78,C8,C82,C83,C84,C86,D11,D2,D3,D5,D7
typical_cds_rare	Chr3	59141386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B84,C30,C76
lof_cds	Chr3	59141406	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	C27,C32
typical_cds_rare	Chr3	59141406	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	C27,C32
lof_cds	Chr3	59141412	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	26	A19,A21,B130,B131,B17,B19,B23,B26,B30,B41,B66,B68,B69,B71,B84,C21,C30,C32,C48,C50,C61,C68,C75,C79,C86,D11
typical_cds_rare	Chr3	59141415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B12,B55
lof_cds	Chr3	59141423	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	55	A11,A14,A2,A23,B100,B105,B106,B107,B109,B11,B118,B12,B125,B129,B140,B15,B2,B28,B36,B37,B44,B52,B55,B59,B6,B64,B67,B7,B76,B80,B83,B84,B90,B91,B92,B98,C21,C22,C23,C27,C33,C35,C4,C44,C47,C5,C56,C63,C67,C71,C81,C83,C84,C87,C9
typical_cds_rare	Chr3	59141437	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B8,C60
lof_cds	Chr3	59141462	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B107,B84,B98
typical_cds_rare	Chr3	59141462	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B107,B84,B98
typical_cds_rare	Chr3	59141503	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B108,B3,D7
typical_cds_rare	Chr3	59141520	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A16,B3,C83
lof_cds	Chr3	59141535	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B65
typical_cds_rare	Chr3	59141535	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B65
lof_cds	Chr3	59141538	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B65
typical_cds_rare	Chr3	59141538	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B65
lof_cds	Chr3	59141547	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	6	A13,B103,B118,B128,B72,D9
typical_cds_rare	Chr3	59141548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	D7
lof_cds	Chr3	59141579	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	8	B31,B36,B83,B90,B91,B97,C56,C63
typical_cds_rare	Chr3	59141599	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B105,B140,B15,C5
typical_cds_rare	Chr3	59141604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	A1
typical_cds_rare	Chr3	59141630	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B53,C76,D8
lof_cds	Chr3	59141635	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	19	A19,B130,B17,B19,B23,B66,B68,B71,B84,C21,C30,C32,C48,C50,C61,C68,C75,C79,C86
typical_cds_rare	Chr3	59141695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	C37,C83
typical_cds_rare	Chr3	59141700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	C37,C83
typical_cds_rare	Chr3	59141706	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	C45
typical_cds_rare	Chr3	59141711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	A15,B32
typical_cds_rare	Chr3	59141714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B124,B64,B79
typical_cds_rare	Chr3	59141720	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	D7
typical_cds_rare	Chr3	59141731	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	C13,C45
typical_cds_rare	Chr3	59141738	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	A20
typical_cds_rare	Chr3	59141739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	1	B113
typical_cds_rare	Chr3	59141782	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	A21,B26,B30
typical_cds_rare	Chr3	59141785	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	B39,B44,C57,C64
typical_cds_rare	Chr3	59141794	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	3	B124,B64,B79
typical_cds_rare	Chr3	59141818	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	4	A8,B26,B64,C87
typical_cds_rare	Chr3	59141840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B44,C57
typical_cds_rare	Chr3	59141872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131019075	SmilChr03G004015	131019075	rna-XM_057947755.1	2	B107,C18