source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	59451479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B4
lof_cds	Chr3	59451647	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	109	A1,A11,A14,A2,A20,A22,A24,A25,A4,A6,A7,B10,B101,B102,B106,B107,B108,B109,B112,B113,B119,B12,B128,B129,B130,B131,B136,B137,B138,B14,B15,B16,B20,B22,B26,B28,B30,B31,B33,B34,B40,B43,B46,B47,B48,B52,B55,B57,B6,B60,B63,B66,B67,B7,B70,B74,B75,B76,B86,B9,B90,B91,B92,B93,B94,B95,B97,B98,C12,C15,C17,C18,C2,C21,C23,C26,C27,C28,C29,C3,C31,C32,C34,C35,C40,C42,C44,C47,C49,C51,C53,C55,C61,C63,C67,C68,C71,C72,C73,C78,C79,C80,C81,C9,D1,D11,D3,D8,D9
lof_cds	Chr3	59451651	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	108	A1,A11,A2,A20,A22,A24,A25,A4,A6,A7,B10,B101,B102,B106,B107,B108,B109,B112,B113,B119,B12,B128,B129,B130,B131,B136,B137,B138,B14,B15,B16,B20,B26,B28,B30,B31,B33,B34,B40,B43,B46,B47,B48,B52,B55,B57,B6,B60,B63,B66,B67,B7,B70,B74,B75,B76,B86,B9,B90,B91,B92,B93,B94,B95,B97,B98,C12,C15,C17,C18,C2,C21,C23,C26,C27,C28,C29,C3,C31,C32,C34,C35,C40,C42,C44,C47,C49,C5,C51,C53,C55,C61,C63,C67,C68,C71,C72,C73,C78,C79,C80,C81,C9,D1,D11,D3,D8,D9
typical_cds_rare	Chr3	59451702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	A13,B127,B134,B34
lof_cds	Chr3	59451721	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	22	A13,A4,B112,B121,B127,B16,B25,B30,B51,B68,B72,B83,B94,B98,C20,C23,C37,C42,C55,C83,C87,D6
lof_cds	Chr3	59451777	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	63	A1,A14,A2,A20,A22,A24,B101,B102,B106,B107,B109,B112,B113,B12,B128,B129,B130,B131,B14,B25,B30,B33,B46,B47,B52,B55,B6,B60,B67,B70,B74,B75,B86,B9,B90,B92,B95,B98,C12,C19,C21,C23,C31,C32,C35,C39,C40,C42,C49,C53,C61,C63,C68,C71,C78,C79,C81,C9,D1,D3,D6,D8,D9
lof_cds	Chr3	59451784	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	63	A1,A14,A2,A20,A22,A24,B101,B102,B106,B107,B109,B112,B113,B12,B128,B129,B130,B131,B14,B25,B30,B33,B46,B47,B52,B55,B6,B60,B67,B70,B74,B75,B86,B9,B90,B92,B95,B98,C12,C19,C21,C23,C31,C32,C35,C39,C40,C42,C49,C53,C61,C63,C68,C71,C78,C79,C81,C9,D1,D3,D6,D8,D9
typical_cds_rare	Chr3	59451826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	A20,A24
typical_cds_rare	Chr3	59451846	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	C19,C48,C82
typical_cds_rare	Chr3	59451850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	C23
typical_cds_rare	Chr3	59451913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A14
typical_cds_rare	Chr3	59451919	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A14
lof_cds	Chr3	59451987	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	A14,B137,B86,D4
typical_cds_rare	Chr3	59451987	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	A14,B137,B86,D4
typical_cds_rare	Chr3	59452121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	B112,B91,C36,C7
typical_cds_rare	Chr3	59452182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	A10,B72,B73
typical_cds_rare	Chr3	59452248	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B124,B90
lof_cds	Chr3	59452275	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	114	A1,A11,A14,A18,A23,A4,A5,A6,A7,B10,B107,B108,B109,B110,B111,B112,B113,B115,B117,B119,B12,B120,B121,B123,B125,B126,B128,B129,B130,B131,B134,B135,B137,B138,B16,B2,B20,B22,B25,B28,B3,B30,B31,B33,B40,B42,B43,B46,B47,B48,B49,B51,B54,B55,B57,B59,B6,B60,B61,B63,B67,B70,B72,B74,B76,B8,B80,B84,B86,B9,B91,B93,B94,B95,B97,B98,C12,C19,C2,C20,C22,C23,C25,C27,C28,C3,C31,C32,C34,C35,C37,C39,C42,C49,C5,C50,C52,C54,C55,C58,C60,C63,C68,C73,C77,C78,C79,C8,C85,C87,C9,D11,D4,D6
typical_cds_rare	Chr3	59452427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B14,B67
typical_cds_rare	Chr3	59452440	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B14,B67
typical_cds_rare	Chr3	59452499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B58,C46
typical_cds_rare	Chr3	59452528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	B130,B17,B73,C29
typical_cds_rare	Chr3	59452596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	5	B29,B37,B53,B54,C41
typical_cds_rare	Chr3	59452613	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B139,B45
typical_cds_rare	Chr3	59452623	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	A20,B108,B17,B42
typical_cds_rare	Chr3	59452630	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	A15,A16
typical_cds_rare	Chr3	59452824	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	C33
typical_cds_rare	Chr3	59453006	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	B71,C17,C62
lof_cds	Chr3	59453034	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	A19,C54
typical_cds_rare	Chr3	59453034	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	A19,C54
typical_cds_rare	Chr3	59453051	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	B71,C17,C62
typical_cds_rare	Chr3	59453109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	B33,B53
typical_cds_rare	Chr3	59453112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	C82,C83,D6
typical_cds_rare	Chr3	59453245	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	4	A13,B127,B134,B34
typical_cds_rare	Chr3	59453252	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	D11
typical_cds_rare	Chr3	59453298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	C82,C83,D6
lof_cds	Chr3	59453407	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	5	B131,B2,C13,C28,C34
typical_cds_rare	Chr3	59453407	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	5	B131,B2,C13,C28,C34
typical_cds_rare	Chr3	59453513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	3	B60,C35,C61
typical_cds_rare	Chr3	59453568	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	5	A19,B13,B55,C51,D5
lof_cds	Chr3	59453670	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	C79
typical_cds_rare	Chr3	59453670	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	C79
typical_cds_rare	Chr3	59453747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	2	A13,B34
lof_cds	Chr3	59453765	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	15	A15,A20,B101,B118,B129,B139,B2,B21,B74,C13,C24,C28,C34,C56,C87
lof_cds	Chr3	59453767	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A6
typical_cds_rare	Chr3	59453767	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A6
lof_cds	Chr3	59453770	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A6
typical_cds_rare	Chr3	59453770	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	A6
typical_cds_rare	Chr3	59453901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B112
lof_cds	Chr3	59453902	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B112
typical_cds_rare	Chr3	59453902	G	GAC	INDEL	2bp_insertion	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B112
typical_cds_rare	Chr3	59454031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B127
typical_cds_rare	Chr3	59454109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014878	SmilChr03G004048	131014878	rna-XM_057943014.1	1	B104