source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr3	59495077	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	24	A22,A24,B102,B103,B131,B136,B44,B59,B61,B73,B90,B92,B93,C21,C26,C40,C47,C51,C53,C55,C63,C67,C71,D2
lof_cds	Chr3	59495085	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	20	A22,A24,B102,B131,B136,B44,B59,B90,B92,C21,C26,C40,C47,C51,C53,C55,C63,C67,C71,D2
lof_cds	Chr3	59495086	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	20	A22,A24,B102,B131,B136,B44,B59,B90,B92,C21,C26,C40,C47,C51,C53,C55,C63,C67,C71,D2
lof_cds	Chr3	59495089	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	21	A20,A22,A24,B102,B131,B136,B44,B59,B90,B92,C21,C26,C40,C47,C51,C53,C55,C63,C67,C71,D2
lof_cds	Chr3	59495092	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	6	B103,B73,B99,C79,C83,C85
lof_cds	Chr3	59495103	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	20	A22,A24,B102,B131,B136,B44,B59,B90,B92,C21,C26,C40,C47,C51,C53,C55,C63,C67,C71,D2
lof_cds	Chr3	59495351	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	7	B106,B120,B125,B139,B45,C51,C7
lof_cds	Chr3	59495375	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B112
typical_cds_rare	Chr3	59495375	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B112
typical_cds_rare	Chr3	59495389	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	B8,C33,D11
lof_cds	Chr3	59495509	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	D4
typical_cds_rare	Chr3	59495509	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	D4
typical_cds_rare	Chr3	59495519	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B55
typical_cds_rare	Chr3	59495689	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	C41,C62
lof_cds	Chr3	59495756	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	31	A19,A23,A5,B115,B123,B127,B130,B134,B14,B140,B15,B26,B66,B67,B95,B99,C19,C3,C30,C31,C32,C39,C48,C49,C54,C68,C72,C79,C82,C85,C9
typical_cds_rare	Chr3	59495854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
lof_cds	Chr3	59495921	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
typical_cds_rare	Chr3	59495921	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
lof_cds	Chr3	59495928	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
typical_cds_rare	Chr3	59495928	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
typical_cds_rare	Chr3	59495993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	A13,B127,B134,B34
lof_cds	Chr3	59496108	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B63
typical_cds_rare	Chr3	59496108	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B63
typical_cds_rare	Chr3	59496121	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B13,D2
typical_cds_rare	Chr3	59497308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B123,B130
typical_cds_rare	Chr3	59497484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B114
typical_cds_rare	Chr3	59497563	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B115,B26,B95,B99
typical_cds_rare	Chr3	59497569	AT	*	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B115,B26,B95,B99,C31
typical_cds_rare	Chr3	59497571	CT	*	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B115,B26,B95,B99,C31
typical_cds_rare	Chr3	59497709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
typical_cds_rare	Chr3	59497715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B90,B92,C15,C6
lof_cds	Chr3	59497724	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
typical_cds_rare	Chr3	59497724	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
lof_cds	Chr3	59497728	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
typical_cds_rare	Chr3	59497728	T	TTA	INDEL	2bp_insertion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
lof_cds	Chr3	59497730	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
typical_cds_rare	Chr3	59497730	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	B122,B24,B75,B97,C33
typical_cds_rare	Chr3	59497784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B122,B24,B97,C33
typical_cds_rare	Chr3	59497831	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B122,B24,B97,C33
typical_cds_rare	Chr3	59497952	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	B124,C55,C56
typical_cds_rare	Chr3	59497977	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	C48
typical_cds_rare	Chr3	59497986	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	B122,B97,C33
typical_cds_rare	Chr3	59498000	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	A22,C63,C67
typical_cds_rare	Chr3	59498027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B122,B24,B97,C33
typical_cds_rare	Chr3	59498135	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	A22,B69,C63,C67
typical_cds_rare	Chr3	59498195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B98,C48
typical_cds_rare	Chr3	59498209	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	A8,B122,B24,B97,C33
typical_cds_rare	Chr3	59498220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	A8,B122,B24,B97,C33
typical_cds_rare	Chr3	59498355	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B127,B134
typical_cds_rare	Chr3	59498379	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B55,B91
typical_cds_rare	Chr3	59498488	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B60,C23
typical_cds_rare	Chr3	59498527	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B24,B97,C33,C36
typical_cds_rare	Chr3	59498541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B24,B97,C33,C36
typical_cds_rare	Chr3	59498584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	A3,B40,B71,D3
lof_cds	Chr3	59498593	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B14
typical_cds_rare	Chr3	59498593	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B14
typical_cds_rare	Chr3	59498668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	A22,B69,C44,C63
typical_cds_rare	Chr3	59498847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	A3,B117,B71
typical_cds_rare	Chr3	59498934	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	2	B84,C80
lof_cds	Chr3	59499083	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B111,B24,B28,C71
typical_cds_rare	Chr3	59499083	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B111,B24,B28,C71
typical_cds_rare	Chr3	59499349	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B46
typical_cds_rare	Chr3	59499376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	A8,B24,B75
typical_cds_rare	Chr3	59499464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	A22,C63,C67,D11
lof_cds	Chr3	59499517	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B83
typical_cds_rare	Chr3	59499517	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B83
typical_cds_rare	Chr3	59499518	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	3	B10,B137,B22
lof_cds	Chr3	59499555	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499555	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499556	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	5	A14,B58,B7,B97,C50
lof_cds	Chr3	59499557	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499557	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
lof_cds	Chr3	59499559	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499559	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	4	B10,B137,B22,B83
typical_cds_rare	Chr3	59499727	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131014872	SmilChr03G004055	131014872	rna-XM_057943006.1,rna-XM_057943007.1,rna-XM_057943008.1	1	B103