source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr3	60438622	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
typical_cds_rare	Chr3	60438635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B112,B74
typical_cds_rare	Chr3	60438660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B112,B74
typical_cds_rare	Chr3	60438670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B112,B74
typical_cds_rare	Chr3	60438692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B112,B74
typical_cds_rare	Chr3	60438762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
typical_cds_rare	Chr3	60438863	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	5	B23,B49,B85,B97,C55
typical_cds_rare	Chr3	60438873	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C40
typical_cds_rare	Chr3	60438883	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	B1,B74,C64,C66
typical_cds_rare	Chr3	60438899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B112,B74
typical_cds_rare	Chr3	60438921	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C77
lof_cds	Chr3	60438924	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B20,D10
typical_cds_rare	Chr3	60438924	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B20,D10
lof_cds	Chr3	60438927	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B20,D10
typical_cds_rare	Chr3	60438927	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B20,D10
typical_cds_rare	Chr3	60438941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B46
typical_cds_rare	Chr3	60438948	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C62
typical_cds_rare	Chr3	60438972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	B1,B112,B53,B74
typical_cds_rare	Chr3	60438975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B46
typical_cds_rare	Chr3	60438976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B46
typical_cds_rare	Chr3	60438981	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	D10
lof_cds	Chr3	60438992	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	7	B105,B137,B51,B92,C22,C36,C64
typical_cds_rare	Chr3	60439008	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	D11
typical_cds_rare	Chr3	60439011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B104
typical_cds_rare	Chr3	60439026	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B46
typical_cds_rare	Chr3	60439028	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B4
typical_cds_rare	Chr3	60439033	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B1,B74
typical_cds_rare	Chr3	60439035	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B99,D11
typical_cds_rare	Chr3	60439062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C10
typical_cds_rare	Chr3	60439073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B46,B74
typical_cds_rare	Chr3	60439074	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
typical_cds_rare	Chr3	60439094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B11,B8
lof_cds	Chr3	60439096	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	38	A14,A7,A9,B10,B11,B110,B120,B122,B128,B135,B24,B26,B30,B38,B39,B40,B45,B46,B57,B59,B7,B76,B77,B8,B84,B98,C10,C20,C33,C42,C45,C5,C52,C64,C66,C72,D11,D5
typical_cds_rare	Chr3	60439098	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	B61,B81,C16,D8
typical_cds_rare	Chr3	60439101	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	5	A23,B112,B135,B60,C53
typical_cds_rare	Chr3	60439105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
typical_cds_rare	Chr3	60439113	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B46,B97
typical_cds_rare	Chr3	60439117	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	A23,B135,B60,C53
lof_cds	Chr3	60439137	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	16	A10,A11,A2,B108,B134,B136,B16,B3,B44,B70,B95,C40,C50,C71,D4,D9
typical_cds_rare	Chr3	60439140	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B30
lof_cds	Chr3	60439142	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C17
typical_cds_rare	Chr3	60439142	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C17
typical_cds_rare	Chr3	60439149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	A23,B60,B82,C53
typical_cds_rare	Chr3	60439153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
lof_cds	Chr3	60439154	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B1,B106
typical_cds_rare	Chr3	60439154	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B1,B106
lof_cds	Chr3	60439226	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	14	A10,A11,A2,B108,B134,B16,B3,B44,B70,B95,C50,C71,D4,D9
lof_cds	Chr3	60439244	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	92	A10,A11,A13,A14,A16,A2,A20,A23,A5,A7,A9,B10,B104,B108,B11,B110,B115,B122,B125,B134,B136,B137,B139,B15,B16,B18,B20,B24,B26,B29,B3,B30,B31,B35,B36,B37,B38,B39,B44,B45,B46,B51,B56,B57,B59,B60,B64,B66,B7,B70,B77,B80,B82,B86,B90,B95,B96,B98,B99,C10,C20,C22,C24,C26,C3,C31,C33,C36,C40,C42,C45,C47,C5,C50,C52,C53,C60,C63,C64,C66,C71,C72,C73,C75,C77,C79,C86,D10,D11,D4,D5,D9
typical_cds_rare	Chr3	60439260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B112,B74
typical_cds_rare	Chr3	60439285	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C45
typical_cds_rare	Chr3	60439296	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B112
lof_cds	Chr3	60439297	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	16	A11,A13,A16,A9,B104,B137,B29,B31,B36,B51,B80,B90,C22,C26,C64,C75
typical_cds_rare	Chr3	60439333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B61,B8
lof_cds	Chr3	60439343	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	14	A7,B11,B135,B26,B40,B46,B57,B7,C42,C45,C5,C72,D11,D5
typical_cds_rare	Chr3	60439350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B112,B74
typical_cds_rare	Chr3	60439361	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	B1,B112,B33,B74
typical_cds_rare	Chr3	60439414	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	C64,C66
typical_cds_rare	Chr3	60439429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	5	B1,B37,B56,B74,B96
typical_cds_rare	Chr3	60439432	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B126,B33,B7
typical_cds_rare	Chr3	60439437	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B1,B26,B74
typical_cds_rare	Chr3	60439445	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	2	B33,B7
lof_cds	Chr3	60439450	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	58	A14,A16,A20,A23,A5,A7,B10,B104,B115,B120,B122,B125,B135,B137,B139,B15,B18,B20,B30,B31,B35,B36,B37,B38,B39,B45,B46,B56,B60,B61,B64,B76,B80,B82,B90,B92,B96,B98,C10,C20,C22,C24,C31,C33,C36,C42,C5,C52,C53,C60,C63,C64,C66,C72,C79,C9,D10,D5
typical_cds_rare	Chr3	60439452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B37,B56,B96
typical_cds_rare	Chr3	60439457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C66
typical_cds_rare	Chr3	60439459	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B85
typical_cds_rare	Chr3	60439462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	A20,A5,A7,B96
lof_cds	Chr3	60439482	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	14	A15,B131,B139,B3,B47,B76,B77,B95,C14,C26,D1,D11,D4,D6
lof_cds	Chr3	60439487	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B61,C16,D8
typical_cds_rare	Chr3	60439487	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B61,C16,D8
typical_cds_rare	Chr3	60439489	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B1
lof_cds	Chr3	60439493	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	46	A1,A13,A4,B100,B101,B105,B106,B111,B113,B114,B12,B120,B123,B133,B137,B14,B140,B15,B17,B36,B4,B52,B55,B59,B66,B73,B89,B9,C15,C17,C2,C35,C38,C41,C59,C6,C61,C67,C7,C70,C80,C82,C85,D3,D5,D7
typical_cds_rare	Chr3	60439541	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	D11
lof_cds	Chr3	60439548	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	23	A21,A24,A25,A3,A5,A6,B100,B127,B17,B28,B58,B73,B78,B83,B94,C33,C34,C46,C61,C8,C84,D2,D5
typical_cds_rare	Chr3	60439566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	4	B61,B81,C16,D8
lof_cds	Chr3	60439569	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	11	A15,B131,B3,B47,B76,B77,B95,C14,C26,D11,D4
lof_cds	Chr3	60439573	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	11	A15,B131,B3,B47,B76,B77,B95,C14,C26,D11,D4
typical_cds_rare	Chr3	60439574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	C36,C54,C78
lof_cds	Chr3	60439605	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	97	A1,A10,A18,A20,A21,A23,A24,A25,A3,A4,A5,A6,B100,B101,B105,B106,B111,B113,B114,B117,B12,B120,B123,B124,B125,B126,B127,B128,B133,B137,B138,B14,B140,B15,B17,B20,B21,B22,B28,B30,B32,B33,B36,B37,B49,B5,B50,B52,B54,B55,B58,B59,B6,B62,B66,B7,B72,B73,B78,B79,B81,B83,B89,B9,B94,B97,C15,C17,C2,C21,C27,C30,C33,C34,C35,C38,C41,C46,C58,C59,C6,C61,C63,C65,C67,C69,C7,C75,C77,C8,C80,C82,C84,C85,D2,D3,D7
lof_cds	Chr3	60439618	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B68
typical_cds_rare	Chr3	60439618	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B68
typical_cds_rare	Chr3	60439629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	B30
typical_cds_rare	Chr3	60439630	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	B4,C19,C4
typical_cds_rare	Chr3	60439647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	3	A20,A5,C73
lof_cds	Chr3	60439655	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14
typical_cds_rare	Chr3	60439655	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14
lof_cds	Chr3	60439658	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14
typical_cds_rare	Chr3	60439658	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14
lof_cds	Chr3	60439661	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14
typical_cds_rare	Chr3	60439661	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131015039	SmilChr03G004168	131015039	rna-XM_057943231.1	1	C14